RNA–Protein interactions for RNA: ENST00000332853.8

VSTM4-202, Transcript of V-set and transmembrane domain containing 4, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene VSTM4, Length 6,392 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VSTM4-202ENST00000332853 TRPA1O75762 1119 aa13.63□□□□□ -0.23
VSTM4-202ENST00000332853 PEX19P40855 299 aa13.63□□□□□ -0.23
VSTM4-202ENST00000332853 FUT2Q10981 343 aa13.63□□□□□ -0.23
VSTM4-202ENST00000332853 ZNF235Q14590 738 aa13.63□□□□□ -0.23
VSTM4-202ENST00000332853 ANO4Q32M45 955 aa13.63□□□□□ -0.23
VSTM4-202ENST00000332853 SPIRE2Q8WWL2 714 aa13.63□□□□□ -0.23
VSTM4-202ENST00000332853 LBHD1Q9BQE6 289 aaPredicted RBP13.63□□□□□ -0.23
VSTM4-202ENST00000332853 PSMC3IPQ9P2W1 217 aaPredicted RBP13.63□□□□□ -0.23
VSTM4-202ENST00000332853 BAG5Q9UL15 447 aa13.63□□□□□ -0.23
VSTM4-202ENST00000332853 GSTA4O15217 222 aa13.62□□□□□ -0.23
VSTM4-202ENST00000332853 MAP3K7O43318 606 aa13.62□□□□□ -0.23
VSTM4-202ENST00000332853 ZWINTO95229 277 aa13.62□□□□□ -0.23
VSTM4-202ENST00000332853 CTCFP49711 727 aaPredicted RBP13.62□□□□□ -0.23
VSTM4-202ENST00000332853 ZNF200P98182 395 aaPredicted RBP13.62□□□□□ -0.23
VSTM4-202ENST00000332853 SATB1Q01826 763 aa13.62□□□□□ -0.23
VSTM4-202ENST00000332853 PTK7Q13308 1070 aa13.62□□□□□ -0.23
VSTM4-202ENST00000332853 CLEC16AQ2KHT3 1053 aa13.62□□□□□ -0.23
VSTM4-202ENST00000332853 MAP1SQ66K74 1059 aaPredicted RBP13.62□□□□□ -0.23
VSTM4-202ENST00000332853 DNERQ8NFT8 737 aa13.62□□□□□ -0.23
VSTM4-202ENST00000332853 TMC2Q8TDI7 906 aa13.62□□□□□ -0.23
VSTM4-202ENST00000332853 HASPINQ8TF76 798 aa13.62□□□□□ -0.23
VSTM4-202ENST00000332853 HNRNPLLQ8WVV9 542 aaKnown RBP13.62□□□□□ -0.23
VSTM4-202ENST00000332853 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP13.62□□□□□ -0.23
VSTM4-202ENST00000332853 OSMRQ99650 979 aa13.62□□□□□ -0.23
VSTM4-202ENST00000332853 YY1P25490 414 aa13.62□□□□□ -0.23
VSTM4-202ENST00000332853 DCAF4L1Q3SXM0 396 aa13.62□□□□□ -0.23
VSTM4-202ENST00000332853 ELMOD1Q8N336 334 aa13.62□□□□□ -0.23
VSTM4-202ENST00000332853 AIPL1Q9NZN9 384 aa13.62□□□□□ -0.23
VSTM4-202ENST00000332853 CDH16O75309 829 aa13.62□□□□□ -0.23
VSTM4-202ENST00000332853 ALDH18A1P54886 795 aaKnown RBP13.62□□□□□ -0.23
VSTM4-202ENST00000332853 RNF219Q5W0B1 726 aaPredicted RBP13.62□□□□□ -0.23
VSTM4-202ENST00000332853 TAS2R42Q7RTR8 314 aa13.62□□□□□ -0.23
VSTM4-202ENST00000332853 LRRC43Q8N309 656 aa13.62□□□□□ -0.23
VSTM4-202ENST00000332853 ATPAF2Q8N5M1 289 aa13.62□□□□□ -0.23
VSTM4-202ENST00000332853 HDAC7Q8WUI4 952 aa13.62□□□□□ -0.23
VSTM4-202ENST00000332853 SCG3Q8WXD2 468 aaKnown RBP13.62□□□□□ -0.23
VSTM4-202ENST00000332853 PABPC5Q96DU9 382 aaKnown RBP13.62□□□□□ -0.23
VSTM4-202ENST00000332853 FAM8A1Q9UBU6 413 aa13.62□□□□□ -0.23
VSTM4-202ENST00000332853 PDHXO00330 501 aa13.62□□□□□ -0.23
VSTM4-202ENST00000332853 GNGT2O14610 69 aa13.62□□□□□ -0.23
VSTM4-202ENST00000332853 INSRRP14616 1297 aa13.62□□□□□ -0.23
VSTM4-202ENST00000332853 AGBL2Q5U5Z8 902 aa13.62□□□□□ -0.23
VSTM4-202ENST00000332853 ACAD11Q709F0 780 aa13.62□□□□□ -0.23
VSTM4-202ENST00000332853 XPO6Q96QU8 1125 aaKnown RBP13.62□□□□□ -0.23
VSTM4-202ENST00000332853 A1CFQ9NQ94 594 aaKnown RBP13.62□□□□□ -0.23
VSTM4-202ENST00000332853 RNF19AQ9NV58 838 aa13.62□□□□□ -0.23
VSTM4-202ENST00000332853 KCNH4Q9UQ05 1017 aa13.62□□□□□ -0.23
VSTM4-202ENST00000332853 EIF4E1BA6NMX2 242 aaKnown RBP13.62□□□□□ -0.23
VSTM4-202ENST00000332853 E5RI56 91 aa13.62□□□□□ -0.23
VSTM4-202ENST00000332853 EPHB6O15197 1021 aa13.62□□□□□ -0.23
VSTM4-202ENST00000332853 PSTPIP1O43586 416 aa13.62□□□□□ -0.23
VSTM4-202ENST00000332853 PTPRAP18433 802 aa13.62□□□□□ -0.23
VSTM4-202ENST00000332853 SLC25A41Q8N5S1 370 aa13.62□□□□□ -0.23
VSTM4-202ENST00000332853 SDCCAG3Q96C92 435 aa13.62□□□□□ -0.23
VSTM4-202ENST00000332853 ASCC2Q9H1I8 757 aaPredicted RBP13.62□□□□□ -0.23
VSTM4-202ENST00000332853 CHEK2O96017 543 aa13.61□□□□□ -0.23
VSTM4-202ENST00000332853 MGAT5BQ3V5L5 792 aa13.61□□□□□ -0.23
VSTM4-202ENST00000332853 MIIPQ5JXC2 388 aa13.61□□□□□ -0.23
VSTM4-202ENST00000332853 C1orf186Q6ZWK4 172 aa13.61□□□□□ -0.23
VSTM4-202ENST00000332853 SLC51AQ86UW1 340 aa13.61□□□□□ -0.23
VSTM4-202ENST00000332853 SLC38A7Q9NVC3 462 aa13.61□□□□□ -0.23
VSTM4-202ENST00000332853 GCKP35557 465 aa13.61□□□□□ -0.23
VSTM4-202ENST00000332853 KCTD19Q17RG1 926 aaPredicted RBP13.61□□□□□ -0.23
VSTM4-202ENST00000332853 WDR49Q8IV35 697 aa13.61□□□□□ -0.23
VSTM4-202ENST00000332853 SNTG2Q9NY99 539 aa13.61□□□□□ -0.23
VSTM4-202ENST00000332853 PRG3Q9Y2Y8 225 aaPredicted RBP13.61□□□□□ -0.23
VSTM4-202ENST00000332853 PSMD10O75832 226 aa13.61□□□□□ -0.23
VSTM4-202ENST00000332853 LUC7L3O95232 432 aaKnown RBP13.61□□□□□ -0.23
VSTM4-202ENST00000332853 CYP3A4P08684 503 aa13.61□□□□□ -0.23
VSTM4-202ENST00000332853 VGLL4Q14135 290 aa13.61□□□□□ -0.23
VSTM4-202ENST00000332853 IL31RAQ8NI17 732 aa13.61□□□□□ -0.23
VSTM4-202ENST00000332853 ACP6Q9NPH0 428 aa13.61□□□□□ -0.23
VSTM4-202ENST00000332853 SLC8A2Q9UPR5 921 aa13.61□□□□□ -0.23
VSTM4-202ENST00000332853 PARP4Q9UKK3 1724 aaKnown RBP13.61□□□□□ -0.23
VSTM4-202ENST00000332853 M0QYT0 321 aa13.61□□□□□ -0.23
VSTM4-202ENST00000332853 DDX3XO00571 662 aaKnown RBP eCLIP13.61□□□□□ -0.23
VSTM4-202ENST00000332853 GJB6O95452 261 aa13.61□□□□□ -0.23
VSTM4-202ENST00000332853 FAM200BP0CF97 657 aa13.61□□□□□ -0.23
VSTM4-202ENST00000332853 WDR93Q6P2C0 686 aa13.61□□□□□ -0.23
VSTM4-202ENST00000332853 SAMD3Q8N6K7 520 aa13.61□□□□□ -0.23
VSTM4-202ENST00000332853 NKX2-3Q8TAU0 364 aa13.61□□□□□ -0.23
VSTM4-202ENST00000332853 ACTRT1Q8TDG2 376 aa13.61□□□□□ -0.23
VSTM4-202ENST00000332853 SIK3Q9Y2K2 1263 aa13.61□□□□□ -0.23
VSTM4-202ENST00000332853 PRLRP16471 622 aa13.61□□□□□ -0.23
VSTM4-202ENST00000332853 ACADSBP45954 432 aa13.61□□□□□ -0.23
VSTM4-202ENST00000332853 IRAK1P51617 712 aa13.61□□□□□ -0.23
VSTM4-202ENST00000332853 C1orf146Q5VVC0 180 aa13.61□□□□□ -0.23
VSTM4-202ENST00000332853 PPHLN1Q8NEY8 458 aaKnown RBP13.61□□□□□ -0.23
VSTM4-202ENST00000332853 GANCQ8TET4 914 aa13.61□□□□□ -0.23
VSTM4-202ENST00000332853 FAM161BQ96MY7 647 aa13.61□□□□□ -0.23
VSTM4-202ENST00000332853 TMEM121Q9BTD3 319 aa13.61□□□□□ -0.23
VSTM4-202ENST00000332853 PAK5Q9P286 719 aa13.61□□□□□ -0.23
VSTM4-202ENST00000332853 AFF4Q9UHB7 1163 aaKnown RBP13.61□□□□□ -0.23
VSTM4-202ENST00000332853 LMO7Q8WWI1 1683 aa13.6□□□□□ -0.23
VSTM4-202ENST00000332853 H3BQF6 201 aa13.6□□□□□ -0.23
VSTM4-202ENST00000332853 PPP1R11O60927 126 aaPredicted RBP13.6□□□□□ -0.23
VSTM4-202ENST00000332853 GRAMD1BQ3KR37 738 aa13.6□□□□□ -0.23
VSTM4-202ENST00000332853 SEC16BQ96JE7 1060 aa13.6□□□□□ -0.23
VSTM4-202ENST00000332853 MAGEB5Q9BZ81 275 aa13.6□□□□□ -0.23
VSTM4-202ENST00000332853 ABI2Q9NYB9 513 aaPredicted RBP13.6□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 21.7 ms