RNA–Protein interactions for RNA: ENST00000332395.6

DDX28-201, Transcript of DEAD-box helicase 28, humanhuman

APPRIS P1 BASIC

Gene DDX28, Length 2,169 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX28-201ENST00000332395 SLC45A1Q9Y2W3 748 aa18.41■□□□□ 0.54
DDX28-201ENST00000332395 SCN4AP35499 1836 aa18.4■□□□□ 0.54
DDX28-201ENST00000332395 CCL15-CCL14A0A0B4J2E2 113 aa18.4■□□□□ 0.54
DDX28-201ENST00000332395 C11orf97A0A1B0GVM6 126 aaPredicted RBP18.4■□□□□ 0.54
DDX28-201ENST00000332395 STRNO43815 780 aa18.4■□□□□ 0.54
DDX28-201ENST00000332395 ARF4P18085 180 aaPredicted RBP18.4■□□□□ 0.54
DDX28-201ENST00000332395 CETN2P41208 172 aa18.4■□□□□ 0.54
DDX28-201ENST00000332395 PTGISQ16647 500 aa18.4■□□□□ 0.54
DDX28-201ENST00000332395 CCL15Q16663 113 aa18.4■□□□□ 0.54
DDX28-201ENST00000332395 ZFYVE27Q5T4F4 411 aa18.4■□□□□ 0.54
DDX28-201ENST00000332395 LRRC38Q5VT99 294 aa18.4■□□□□ 0.54
DDX28-201ENST00000332395 RHBDF2Q6PJF5 856 aa18.4■□□□□ 0.54
DDX28-201ENST00000332395 MTHFD1LQ6UB35 978 aa18.4■□□□□ 0.54
DDX28-201ENST00000332395 SUGP1Q8IWZ8 645 aaKnown RBP18.4■□□□□ 0.54
DDX28-201ENST00000332395 RCOR2Q8IZ40 523 aa18.4■□□□□ 0.54
DDX28-201ENST00000332395 RBM41Q96IZ5 413 aaKnown RBP18.4■□□□□ 0.54
DDX28-201ENST00000332395 SDCBP2Q9H190 292 aa18.4■□□□□ 0.54
DDX28-201ENST00000332395 STRIP2Q9ULQ0 834 aa18.4■□□□□ 0.54
DDX28-201ENST00000332395 IQCA1LA6NCM1 817 aa18.4■□□□□ 0.54
DDX28-201ENST00000332395 PI4K2BG5E9Z4 385 aa18.4■□□□□ 0.54
DDX28-201ENST00000332395 H3BRB1 525 aa18.4■□□□□ 0.54
DDX28-201ENST00000332395 NDUFAB1O14561 156 aa18.4■□□□□ 0.54
DDX28-201ENST00000332395 MED7O43513 233 aa18.4■□□□□ 0.54
DDX28-201ENST00000332395 SNAI1O95863 264 aaPredicted RBP18.4■□□□□ 0.54
DDX28-201ENST00000332395 ATF2P15336 505 aa18.4■□□□□ 0.54
DDX28-201ENST00000332395 RAD23BP54727 409 aa18.4■□□□□ 0.54
DDX28-201ENST00000332395 PIGHQ14442 188 aaPredicted RBP18.4■□□□□ 0.54
DDX28-201ENST00000332395 PTPN20Q4JDL3 420 aa18.4■□□□□ 0.54
DDX28-201ENST00000332395 CXorf38Q8TB03 319 aa18.4■□□□□ 0.54
DDX28-201ENST00000332395 PGM2Q96G03 612 aa18.4■□□□□ 0.54
DDX28-201ENST00000332395 FAXDC2Q96IV6 333 aa18.4■□□□□ 0.54
DDX28-201ENST00000332395 SCLT1Q96NL6 688 aa18.4■□□□□ 0.54
DDX28-201ENST00000332395 SLITRK1Q96PX8 696 aa18.4■□□□□ 0.54
DDX28-201ENST00000332395 LHX5Q9H2C1 402 aa18.4■□□□□ 0.54
DDX28-201ENST00000332395 ASB7Q9H672 318 aa18.4■□□□□ 0.54
DDX28-201ENST00000332395 TUT1Q9H6E5 874 aaKnown RBP18.4■□□□□ 0.54
DDX28-201ENST00000332395 SMYD3Q9H7B4 428 aa18.4■□□□□ 0.54
DDX28-201ENST00000332395 AAASQ9NRG9 546 aa18.4■□□□□ 0.54
DDX28-201ENST00000332395 NEU2Q9Y3R4 380 aa18.4■□□□□ 0.54
DDX28-201ENST00000332395 UNCXA6NJT0 531 aa18.39■□□□□ 0.53
DDX28-201ENST00000332395 KRT1P04264 644 aa18.39■□□□□ 0.53
DDX28-201ENST00000332395 PAEPP09466 180 aa18.39■□□□□ 0.53
DDX28-201ENST00000332395 GCLCP48506 637 aaPredicted RBP18.39■□□□□ 0.53
DDX28-201ENST00000332395 GTF2A2P52657 109 aa18.39■□□□□ 0.53
DDX28-201ENST00000332395 BYSLQ13895 437 aaKnown RBP18.39■□□□□ 0.53
DDX28-201ENST00000332395 SLC10A6Q3KNW5 377 aa18.39■□□□□ 0.53
DDX28-201ENST00000332395 NLRP7Q8WX94 980 aa18.39■□□□□ 0.53
DDX28-201ENST00000332395 BRI3BPQ8WY22 251 aa18.39■□□□□ 0.53
DDX28-201ENST00000332395 MORF4L1Q9UBU8 362 aa18.39■□□□□ 0.53
DDX28-201ENST00000332395 KRT10P13645 584 aa18.38■□□□□ 0.53
DDX28-201ENST00000332395 POLR2BP30876 1174 aaKnown RBP18.38■□□□□ 0.53
DDX28-201ENST00000332395 ADCY8P40145 1251 aa18.38■□□□□ 0.53
DDX28-201ENST00000332395 ITGA8P53708 1063 aa18.38■□□□□ 0.53
DDX28-201ENST00000332395 ADCY2Q08462 1091 aa18.38■□□□□ 0.53
DDX28-201ENST00000332395 ORC1Q13415 861 aa18.38■□□□□ 0.53
DDX28-201ENST00000332395 MFSD7Q6UXD7 560 aa18.38■□□□□ 0.53
DDX28-201ENST00000332395 TRMT10CQ7L0Y3 403 aaKnown RBP18.38■□□□□ 0.53
DDX28-201ENST00000332395 PNMA8AQ86V59 439 aaPredicted RBP18.38■□□□□ 0.53
DDX28-201ENST00000332395 NIPA2Q8N8Q9 360 aa18.38■□□□□ 0.53
DDX28-201ENST00000332395 UHMK1Q8TAS1 419 aaKnown RBP18.38■□□□□ 0.53
DDX28-201ENST00000332395 TRAIPQ9BWF2 469 aa18.38■□□□□ 0.53
DDX28-201ENST00000332395 CYTH4Q9UIA0 394 aa18.38■□□□□ 0.53
DDX28-201ENST00000332395 CLEC11AQ9Y240 323 aa18.38■□□□□ 0.53
DDX28-201ENST00000332395 TLDC2A0PJX2 215 aa18.38■□□□□ 0.53
DDX28-201ENST00000332395 SRRM3A6NNA2 597 aaPredicted RBP18.38■□□□□ 0.53
DDX28-201ENST00000332395 EBAG9O00559 213 aa18.38■□□□□ 0.53
DDX28-201ENST00000332395 ATF7P17544 494 aaPredicted RBP18.38■□□□□ 0.53
DDX28-201ENST00000332395 ATICP31939 592 aa18.38■□□□□ 0.53
DDX28-201ENST00000332395 VPS41P49754 854 aa18.38■□□□□ 0.53
DDX28-201ENST00000332395 CAV1Q03135 178 aa18.38■□□□□ 0.53
DDX28-201ENST00000332395 PPARDQ03181 441 aa18.38■□□□□ 0.53
DDX28-201ENST00000332395 KAZNQ674X7 775 aa18.38■□□□□ 0.53
DDX28-201ENST00000332395 ZNF365Q70YC5 407 aa18.38■□□□□ 0.53
DDX28-201ENST00000332395 CROCCP2Q86T23 111 aa18.38■□□□□ 0.53
DDX28-201ENST00000332395 DPP9Q86TI2 863 aa18.38■□□□□ 0.53
DDX28-201ENST00000332395 SLC4A11Q8NBS3 891 aa18.38■□□□□ 0.53
DDX28-201ENST00000332395 TWNKQ96RR1 684 aa18.38■□□□□ 0.53
DDX28-201ENST00000332395 TMEM109Q9BVC6 243 aa18.38■□□□□ 0.53
DDX28-201ENST00000332395 CDC42EP4Q9H3Q1 356 aaKnown RBP18.38■□□□□ 0.53
DDX28-201ENST00000332395 VRTNQ9H8Y1 702 aa18.38■□□□□ 0.53
DDX28-201ENST00000332395 HMGXB4Q9UGU5 601 aa18.38■□□□□ 0.53
DDX28-201ENST00000332395 SMIM23A6NLE4 172 aa18.37■□□□□ 0.53
DDX28-201ENST00000332395 GOLGA8SH3BPF8 625 aa18.37■□□□□ 0.53
DDX28-201ENST00000332395 TSPAN1O60635 241 aa18.37■□□□□ 0.53
DDX28-201ENST00000332395 CHKAP35790 457 aa18.37■□□□□ 0.53
DDX28-201ENST00000332395 SEC24CP53992 1094 aa18.37■□□□□ 0.53
DDX28-201ENST00000332395 KYAT1Q16773 422 aa18.37■□□□□ 0.53
DDX28-201ENST00000332395 MAP1SQ66K74 1059 aaPredicted RBP18.37■□□□□ 0.53
DDX28-201ENST00000332395 TXNRD3NBQ6F5E7 133 aa18.37■□□□□ 0.53
DDX28-201ENST00000332395 ILDR2Q71H61 639 aa18.37■□□□□ 0.53
DDX28-201ENST00000332395 GPR142Q7Z601 462 aa18.37■□□□□ 0.53
DDX28-201ENST00000332395 CCDC89Q8N998 374 aa18.37■□□□□ 0.53
DDX28-201ENST00000332395 TJP2Q9UDY2 1190 aa18.37■□□□□ 0.53
DDX28-201ENST00000332395 RGS16O15492 202 aaPredicted RBP18.37■□□□□ 0.53
DDX28-201ENST00000332395 CILPO75339 1184 aa18.37■□□□□ 0.53
DDX28-201ENST00000332395 TJP3O95049 919 aa18.37■□□□□ 0.53
DDX28-201ENST00000332395 SMPD1P17405 629 aa18.37■□□□□ 0.53
DDX28-201ENST00000332395 RFC1P35251 1148 aaPredicted RBP18.37■□□□□ 0.53
DDX28-201ENST00000332395 PTPN11Q06124 597 aaPredicted RBP18.37■□□□□ 0.53
DDX28-201ENST00000332395 TMEM132DQ14C87 1099 aa18.37■□□□□ 0.53
Retrieved 100 of 20,778 RNA–protein pairs in 18.8 ms