RNA–Protein interactions for RNA: ENST00000331563.6

PKP3-201, Transcript of plakophilin 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PKP3, Length 2,809 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PKP3-201ENST00000331563 TRIM55Q9BYV6 548 aa19.1■□□□□ 0.65
PKP3-201ENST00000331563 KIF13BQ9NQT8 1826 aa19.1■□□□□ 0.65
PKP3-201ENST00000331563 TAS2R1Q9NYW7 299 aa19.1■□□□□ 0.65
PKP3-201ENST00000331563 FZD1Q9UP38 647 aa19.1■□□□□ 0.65
PKP3-201ENST00000331563 A6NJR5 290 aa19.1■□□□□ 0.65
PKP3-201ENST00000331563 FSCN2O14926 492 aa19.1■□□□□ 0.65
PKP3-201ENST00000331563 TGFB1I1O43294 461 aa19.1■□□□□ 0.65
PKP3-201ENST00000331563 SORBS3O60504 671 aa19.1■□□□□ 0.65
PKP3-201ENST00000331563 BMP3P12645 472 aa19.1■□□□□ 0.65
PKP3-201ENST00000331563 MAN1A1P33908 653 aa19.1■□□□□ 0.65
PKP3-201ENST00000331563 MAPK6Q16659 721 aa19.1■□□□□ 0.65
PKP3-201ENST00000331563 KBTBD12Q3ZCT8 623 aa19.1■□□□□ 0.65
PKP3-201ENST00000331563 CCDC92Q53HC0 331 aaPredicted RBP19.1■□□□□ 0.65
PKP3-201ENST00000331563 CCDC174Q6PII3 467 aa19.1■□□□□ 0.65
PKP3-201ENST00000331563 SYDE1Q6ZW31 735 aaPredicted RBP19.1■□□□□ 0.65
PKP3-201ENST00000331563 MARK2Q7KZI7 788 aaKnown RBP19.1■□□□□ 0.65
PKP3-201ENST00000331563 SLC5A5Q92911 643 aa19.1■□□□□ 0.65
PKP3-201ENST00000331563 SLCO2A1Q92959 643 aa19.1■□□□□ 0.65
PKP3-201ENST00000331563 FBXO28Q9NVF7 368 aa19.1■□□□□ 0.65
PKP3-201ENST00000331563 A0A0J9YVX5 310 aa19.1■□□□□ 0.65
PKP3-201ENST00000331563 A0A1W2PPM1 405 aa19.1■□□□□ 0.65
PKP3-201ENST00000331563 MEIS2O14770 477 aa19.1■□□□□ 0.65
PKP3-201ENST00000331563 ZBED4O75132 1171 aa19.1■□□□□ 0.65
PKP3-201ENST00000331563 FGFR1P11362 822 aa19.1■□□□□ 0.65
PKP3-201ENST00000331563 ARFIP2P53365 341 aa19.1■□□□□ 0.65
PKP3-201ENST00000331563 ZNF554Q86TJ5 538 aa19.1■□□□□ 0.65
PKP3-201ENST00000331563 CYP2W1Q8TAV3 490 aa19.1■□□□□ 0.65
PKP3-201ENST00000331563 NMD3Q96D46 503 aaKnown RBP19.1■□□□□ 0.65
PKP3-201ENST00000331563 NDE1Q9NXR1 346 aa19.1■□□□□ 0.65
PKP3-201ENST00000331563 FAM13AO94988 1023 aa19.09■□□□□ 0.65
PKP3-201ENST00000331563 ZFXP17010 805 aaPredicted RBP19.09■□□□□ 0.65
PKP3-201ENST00000331563 KRT4P19013 534 aa19.09■□□□□ 0.65
PKP3-201ENST00000331563 C6orf163Q5TEZ5 329 aa19.09■□□□□ 0.65
PKP3-201ENST00000331563 OLFML2BQ68BL8 750 aa19.09■□□□□ 0.65
PKP3-201ENST00000331563 CCDC80Q76M96 950 aa19.09■□□□□ 0.65
PKP3-201ENST00000331563 SPATA24Q86W54 205 aa19.09■□□□□ 0.65
PKP3-201ENST00000331563 DCAF4Q8WV16 495 aa19.09■□□□□ 0.65
PKP3-201ENST00000331563 ABTB1Q969K4 478 aaPredicted RBP19.09■□□□□ 0.65
PKP3-201ENST00000331563 PTCD3Q96EY7 689 aaKnown RBP19.09■□□□□ 0.65
PKP3-201ENST00000331563 ECSITQ9BQ95 431 aa19.09■□□□□ 0.65
PKP3-201ENST00000331563 BRD8Q9H0E9 1235 aa19.09■□□□□ 0.65
PKP3-201ENST00000331563 SEC23IPQ9Y6Y8 1000 aaKnown RBP19.09■□□□□ 0.65
PKP3-201ENST00000331563 GREB1LQ9C091 1923 aaPredicted RBP19.09■□□□□ 0.65
PKP3-201ENST00000331563 POLD1P28340 1107 aa19.09■□□□□ 0.65
PKP3-201ENST00000331563 UBXN2AP68543 259 aa19.09■□□□□ 0.65
PKP3-201ENST00000331563 PRAMEF18Q5VWM3 479 aa19.09■□□□□ 0.65
PKP3-201ENST00000331563 SAMD7Q7Z3H4 446 aa19.09■□□□□ 0.65
PKP3-201ENST00000331563 NME8Q8N427 588 aa19.09■□□□□ 0.65
PKP3-201ENST00000331563 CCDC89Q8N998 374 aa19.09■□□□□ 0.65
PKP3-201ENST00000331563 PRR11Q96HE9 360 aaPredicted RBP19.09■□□□□ 0.65
PKP3-201ENST00000331563 ACP6Q9NPH0 428 aa19.09■□□□□ 0.65
PKP3-201ENST00000331563 ANPEPP15144 967 aa19.08■□□□□ 0.65
PKP3-201ENST00000331563 ADRA1DP25100 572 aa19.08■□□□□ 0.65
PKP3-201ENST00000331563 LRRC36Q1X8D7 754 aa19.08■□□□□ 0.65
PKP3-201ENST00000331563 SPDYE2Q495Y8 402 aa19.08■□□□□ 0.65
PKP3-201ENST00000331563 SYDE2Q5VT97 1194 aa19.08■□□□□ 0.65
PKP3-201ENST00000331563 DUS1LQ6P1R4 473 aaKnown RBP19.08■□□□□ 0.65
PKP3-201ENST00000331563 FAM151AQ8WW52 585 aa19.08■□□□□ 0.65
PKP3-201ENST00000331563 EURLQ9NYK6 297 aa19.08■□□□□ 0.65
PKP3-201ENST00000331563 ATRNL1Q5VV63 1379 aa19.08■□□□□ 0.64
PKP3-201ENST00000331563 CIB2O75838 187 aa19.08■□□□□ 0.64
PKP3-201ENST00000331563 YY1P25490 414 aa19.08■□□□□ 0.64
PKP3-201ENST00000331563 HPCAP84074 193 aa19.08■□□□□ 0.64
PKP3-201ENST00000331563 PRR16Q569H4 304 aa19.08■□□□□ 0.64
PKP3-201ENST00000331563 PCNX4Q63HM2 1172 aa19.08■□□□□ 0.64
PKP3-201ENST00000331563 BBOF1Q8ND07 529 aa19.08■□□□□ 0.64
PKP3-201ENST00000331563 DDX55Q8NHQ9 600 aaKnown RBP eCLIP19.08■□□□□ 0.641e-14■■■■□ 19.5
PKP3-201ENST00000331563 AGAP3Q96P47 875 aa19.08■□□□□ 0.64
PKP3-201ENST00000331563 CATSPER2Q96P56 530 aa19.08■□□□□ 0.64
PKP3-201ENST00000331563 PCDHB18PQ96TA0 734 aa19.08■□□□□ 0.64
PKP3-201ENST00000331563 DCLK3Q9C098 648 aa19.08■□□□□ 0.64
PKP3-201ENST00000331563 CYLDQ9NQC7 956 aa19.08■□□□□ 0.64
PKP3-201ENST00000331563 SENP1Q9P0U3 644 aa19.08■□□□□ 0.64
PKP3-201ENST00000331563 ARMCX1Q9P291 453 aa19.08■□□□□ 0.64
PKP3-201ENST00000331563 PRR12Q9ULL5 1215 aa19.08■□□□□ 0.64
PKP3-201ENST00000331563 R3HDM2Q9Y2K5 976 aaKnown RBP19.08■□□□□ 0.64
PKP3-201ENST00000331563 GJA3Q9Y6H8 435 aa19.08■□□□□ 0.64
PKP3-201ENST00000331563 A8MXQ7 604 aa19.07■□□□□ 0.64
PKP3-201ENST00000331563 SGPL1O95470 568 aa19.07■□□□□ 0.64
PKP3-201ENST00000331563 DALRD3Q5D0E6 543 aaKnown RBP19.07■□□□□ 0.64
PKP3-201ENST00000331563 FBXO11Q86XK2 927 aa19.07■□□□□ 0.64
PKP3-201ENST00000331563 NAT14Q8WUY8 206 aa19.07■□□□□ 0.64
PKP3-201ENST00000331563 TTC25Q96NG3 672 aa19.07■□□□□ 0.64
PKP3-201ENST00000331563 OXCT2Q9BYC2 517 aaPredicted RBP19.07■□□□□ 0.64
PKP3-201ENST00000331563 ANO3Q9BYT9 981 aa19.07■□□□□ 0.64
PKP3-201ENST00000331563 BMT2Q1RMZ1 405 aa19.07■□□□□ 0.64
PKP3-201ENST00000331563 KLC3Q6P597 504 aa19.07■□□□□ 0.64
PKP3-201ENST00000331563 ZNF398Q8TD17 642 aa19.07■□□□□ 0.64
PKP3-201ENST00000331563 HAUS1Q96CS2 278 aa19.07■□□□□ 0.64
PKP3-201ENST00000331563 MPP4Q96JB8 637 aa19.07■□□□□ 0.64
PKP3-201ENST00000331563 OSBPL8Q9BZF1 889 aa19.07■□□□□ 0.64
PKP3-201ENST00000331563 DDX43Q9NXZ2 648 aaKnown RBP19.07■□□□□ 0.64
PKP3-201ENST00000331563 CLIC5Q9NZA1 410 aa19.07■□□□□ 0.64
PKP3-201ENST00000331563 IL1RAPL1Q9NZN1 696 aa19.07■□□□□ 0.64
PKP3-201ENST00000331563 ZBTB21Q9ULJ3 1066 aa19.07■□□□□ 0.64
PKP3-201ENST00000331563 TMEM98Q9Y2Y6 226 aa19.07■□□□□ 0.64
PKP3-201ENST00000331563 C2orf71A6NGG8 1288 aa19.06■□□□□ 0.64
PKP3-201ENST00000331563 B2RBV5 119 aa19.06■□□□□ 0.64
PKP3-201ENST00000331563 H3BRJ5 948 aa19.06■□□□□ 0.64
PKP3-201ENST00000331563 GOLGA8RI6L899 631 aa19.06■□□□□ 0.64
Retrieved 100 of 20,778 RNA–protein pairs in 17.6 ms