RNA–Protein interactions for RNA: ENST00000330374.6

VMA21-201, Transcript of VMA21, vacuolar ATPase assembly factor, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VMA21, Length 4,717 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VMA21-201ENST00000330374 CFAP157Q5JU67 520 aa8.3□□□□□ -1.08
VMA21-201ENST00000330374 FAM196AQ6ZSG2 479 aa8.3□□□□□ -1.08
VMA21-201ENST00000330374 ALYREFQ86V81 257 aaKnown RBP8.3□□□□□ -1.08
VMA21-201ENST00000330374 RHPN2Q8IUC4 686 aa8.3□□□□□ -1.08
VMA21-201ENST00000330374 GALNT15Q8N3T1 639 aa8.3□□□□□ -1.08
VMA21-201ENST00000330374 HIPK4Q8NE63 616 aa8.3□□□□□ -1.08
VMA21-201ENST00000330374 FBXL13Q8NEE6 735 aa8.3□□□□□ -1.08
VMA21-201ENST00000330374 FBXO27Q8NI29 283 aa8.3□□□□□ -1.08
VMA21-201ENST00000330374 BICD1Q96G01 975 aa8.3□□□□□ -1.08
VMA21-201ENST00000330374 FAM111AQ96PZ2 611 aa8.3□□□□□ -1.08
VMA21-201ENST00000330374 TSSK1BQ9BXA7 367 aa8.3□□□□□ -1.08
VMA21-201ENST00000330374 TMEM206Q9H813 350 aa8.3□□□□□ -1.08
VMA21-201ENST00000330374 HOMER2Q9NSB8 354 aa8.3□□□□□ -1.08
VMA21-201ENST00000330374 WDR35Q9P2L0 1181 aa8.3□□□□□ -1.08
VMA21-201ENST00000330374 KANSL3Q9P2N6 904 aa8.3□□□□□ -1.08
VMA21-201ENST00000330374 SMG5Q9UPR3 1016 aaKnown RBP8.3□□□□□ -1.08
VMA21-201ENST00000330374 CDK5RAP2Q96SN8 1893 aa8.3□□□□□ -1.08
VMA21-201ENST00000330374 CIITAP33076 1130 aa8.29□□□□□ -1.08
VMA21-201ENST00000330374 NRLP54845 237 aa8.29□□□□□ -1.08
VMA21-201ENST00000330374 SLC34A1Q06495 639 aa8.29□□□□□ -1.08
VMA21-201ENST00000330374 SLC45A4Q5BKX6 768 aa8.29□□□□□ -1.08
VMA21-201ENST00000330374 IRGCQ6NXR0 463 aa8.29□□□□□ -1.08
VMA21-201ENST00000330374 MFSD7Q6UXD7 560 aa8.29□□□□□ -1.08
VMA21-201ENST00000330374 MFN1Q8IWA4 741 aa8.29□□□□□ -1.08
VMA21-201ENST00000330374 RHOT1Q8IXI2 618 aa8.29□□□□□ -1.08
VMA21-201ENST00000330374 PYROXD1Q8WU10 500 aa8.29□□□□□ -1.08
VMA21-201ENST00000330374 LRRN4Q8WUT4 740 aa8.29□□□□□ -1.08
VMA21-201ENST00000330374 RNF34Q969K3 372 aa8.29□□□□□ -1.08
VMA21-201ENST00000330374 NSL1Q96IY1 281 aa8.29□□□□□ -1.08
VMA21-201ENST00000330374 MANSC1Q9H8J5 431 aa8.29□□□□□ -1.08
VMA21-201ENST00000330374 PSMC3IPQ9P2W1 217 aaPredicted RBP8.29□□□□□ -1.08
VMA21-201ENST00000330374 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP8.29□□□□□ -1.08
VMA21-201ENST00000330374 FAM237BA0A1B0GVD1 139 aa8.29□□□□□ -1.08
VMA21-201ENST00000330374 RBM47A0AV96 593 aaKnown RBP8.29□□□□□ -1.08
VMA21-201ENST00000330374 B2RBV5 119 aa8.29□□□□□ -1.08
VMA21-201ENST00000330374 E7ENQ6 273 aa8.29□□□□□ -1.08
VMA21-201ENST00000330374 SLC26A4O43511 780 aa8.29□□□□□ -1.08
VMA21-201ENST00000330374 TCEA3O75764 348 aa8.29□□□□□ -1.08
VMA21-201ENST00000330374 PYGLP06737 847 aa8.29□□□□□ -1.08
VMA21-201ENST00000330374 ZRSR2Q15696 482 aaKnown RBP8.29□□□□□ -1.08
VMA21-201ENST00000330374 CCNG2Q16589 344 aa8.29□□□□□ -1.08
VMA21-201ENST00000330374 OR52E8Q6IFG1 317 aa8.29□□□□□ -1.08
VMA21-201ENST00000330374 C3orf62Q6ZUJ4 267 aa8.29□□□□□ -1.08
VMA21-201ENST00000330374 SYDE1Q6ZW31 735 aaPredicted RBP8.29□□□□□ -1.08
VMA21-201ENST00000330374 SV2AQ7L0J3 742 aa8.29□□□□□ -1.08
VMA21-201ENST00000330374 CEP120Q8N960 986 aa8.29□□□□□ -1.08
VMA21-201ENST00000330374 BBOF1Q8ND07 529 aa8.29□□□□□ -1.08
VMA21-201ENST00000330374 SLCO2A1Q92959 643 aa8.29□□□□□ -1.08
VMA21-201ENST00000330374 CCDC17Q96LX7 622 aa8.29□□□□□ -1.08
VMA21-201ENST00000330374 FAM213AQ9BRX8 229 aa8.29□□□□□ -1.08
VMA21-201ENST00000330374 RNF39Q9H2S5 420 aa8.29□□□□□ -1.08
VMA21-201ENST00000330374 TAS2R1Q9NYW7 299 aa8.29□□□□□ -1.08
VMA21-201ENST00000330374 C2CD2LO14523 706 aa8.29□□□□□ -1.08
VMA21-201ENST00000330374 DNALI1O14645 258 aaPredicted RBP8.29□□□□□ -1.08
VMA21-201ENST00000330374 ATP2A1O14983 1001 aa8.29□□□□□ -1.08
VMA21-201ENST00000330374 MYL2P10916 166 aa8.29□□□□□ -1.08
VMA21-201ENST00000330374 RPL7AP62424 266 aaKnown RBP8.29□□□□□ -1.08
VMA21-201ENST00000330374 NFX1Q12986 1120 aaKnown RBP8.29□□□□□ -1.08
VMA21-201ENST00000330374 APOBEC3HQ6NTF7 200 aaKnown RBP8.29□□□□□ -1.08
VMA21-201ENST00000330374 IZUMO2Q6UXV1 221 aa8.29□□□□□ -1.08
VMA21-201ENST00000330374 GADD45GIP1Q8TAE8 222 aaPredicted RBP8.29□□□□□ -1.08
VMA21-201ENST00000330374 DDX1Q92499 740 aaKnown RBP8.29□□□□□ -1.08
VMA21-201ENST00000330374 ZNF395Q9H8N7 513 aaPredicted RBP8.29□□□□□ -1.08
VMA21-201ENST00000330374 EURLQ9NYK6 297 aa8.29□□□□□ -1.08
VMA21-201ENST00000330374 ACTL7BQ9Y614 415 aa8.29□□□□□ -1.08
VMA21-201ENST00000330374 GRIN3BO60391 1043 aa8.29□□□□□ -1.08
VMA21-201ENST00000330374 PROSCO94903 275 aa8.29□□□□□ -1.08
VMA21-201ENST00000330374 LMNAP02545 664 aaKnown RBP8.29□□□□□ -1.08
VMA21-201ENST00000330374 TNNI1P19237 187 aa8.29□□□□□ -1.08
VMA21-201ENST00000330374 IRX4P78413 519 aa8.29□□□□□ -1.08
VMA21-201ENST00000330374 ALCAMQ13740 583 aa8.29□□□□□ -1.08
VMA21-201ENST00000330374 LBRQ14739 615 aaKnown RBP8.29□□□□□ -1.08
VMA21-201ENST00000330374 SMTNL2Q2TAL5 461 aa8.29□□□□□ -1.08
VMA21-201ENST00000330374 ZNF394Q53GI3 561 aa8.29□□□□□ -1.08
VMA21-201ENST00000330374 XKR9Q5GH70 373 aa8.29□□□□□ -1.08
VMA21-201ENST00000330374 TXNRD3NBQ6F5E7 133 aa8.29□□□□□ -1.08
VMA21-201ENST00000330374 TMEM270Q6UE05 265 aa8.29□□□□□ -1.08
VMA21-201ENST00000330374 CENPUQ71F23 418 aa8.29□□□□□ -1.08
VMA21-201ENST00000330374 PALM2Q8IXS6 379 aa8.29□□□□□ -1.08
VMA21-201ENST00000330374 PAFAH2Q99487 392 aa8.29□□□□□ -1.08
VMA21-201ENST00000330374 THTPAQ9BU02 230 aa8.29□□□□□ -1.08
VMA21-201ENST00000330374 WDR11Q9BZH6 1224 aa8.29□□□□□ -1.08
VMA21-201ENST00000330374 C1orf112Q9NSG2 853 aa8.29□□□□□ -1.08
VMA21-201ENST00000330374 PCMTD2Q9NV79 361 aa8.29□□□□□ -1.08
VMA21-201ENST00000330374 PPARGC1AQ9UBK2 798 aaKnown RBP8.29□□□□□ -1.08
VMA21-201ENST00000330374 PPME1Q9Y570 386 aa8.29□□□□□ -1.08
VMA21-201ENST00000330374 MAFBQ9Y5Q3 323 aaPredicted RBP8.29□□□□□ -1.08
VMA21-201ENST00000330374 ZHX2Q9Y6X8 837 aa8.29□□□□□ -1.08
VMA21-201ENST00000330374 TJP3O95049 919 aa8.28□□□□□ -1.08
VMA21-201ENST00000330374 RTN3O95197 1032 aaPredicted RBP8.28□□□□□ -1.08
VMA21-201ENST00000330374 HARSP12081 509 aaKnown RBP8.28□□□□□ -1.08
VMA21-201ENST00000330374 KLRC2P26717 231 aa8.28□□□□□ -1.08
VMA21-201ENST00000330374 ADSSP30520 456 aa8.28□□□□□ -1.08
VMA21-201ENST00000330374 CENPCQ03188 943 aa8.28□□□□□ -1.08
VMA21-201ENST00000330374 NFIL3Q16649 462 aa8.28□□□□□ -1.08
VMA21-201ENST00000330374 ANKRD22Q5VYY1 191 aa8.28□□□□□ -1.08
VMA21-201ENST00000330374 NLRX1Q86UT6 975 aa8.28□□□□□ -1.08
VMA21-201ENST00000330374 SLC9A9Q8IVB4 645 aa8.28□□□□□ -1.08
VMA21-201ENST00000330374 B4GALNT2Q8NHY0 566 aa8.28□□□□□ -1.08
VMA21-201ENST00000330374 ACER1Q8TDN7 264 aa8.28□□□□□ -1.08
Retrieved 100 of 20,778 RNA–protein pairs in 31.7 ms