RNA–Protein interactions for RNA: ENST00000330188.13

TPM3-206, Transcript of tropomyosin 3, humanhuman

TSL 1 (best) BASIC

Gene TPM3, Length 2,108 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM3-206ENST00000330188 SIX4Q9UIU6 781 aa15.4■□□□□ 0.06
TPM3-206ENST00000330188 DNPEPQ9ULA0 475 aa15.4■□□□□ 0.06
TPM3-206ENST00000330188 ASAP2O43150 1006 aa15.39■□□□□ 0.05
TPM3-206ENST00000330188 TJP3O95049 919 aa15.39■□□□□ 0.05
TPM3-206ENST00000330188 C22orf31O95567 290 aa15.39■□□□□ 0.05
TPM3-206ENST00000330188 IQCF3P0C7M6 154 aa15.39■□□□□ 0.05
TPM3-206ENST00000330188 ATF7P17544 494 aaPredicted RBP15.39■□□□□ 0.05
TPM3-206ENST00000330188 PTPN7P35236 360 aa15.39■□□□□ 0.05
TPM3-206ENST00000330188 RAP1GAPP47736 663 aa15.39■□□□□ 0.05
TPM3-206ENST00000330188 COPS2P61201 443 aa15.39■□□□□ 0.05
TPM3-206ENST00000330188 LMNB2Q03252 620 aa15.39■□□□□ 0.05
TPM3-206ENST00000330188 PTPN20Q4JDL3 420 aa15.39■□□□□ 0.05
TPM3-206ENST00000330188 GSTA5Q7RTV2 222 aa15.39■□□□□ 0.05
TPM3-206ENST00000330188 CPLX4Q7Z7G2 160 aa15.39■□□□□ 0.05
TPM3-206ENST00000330188 CDCA5Q96FF9 252 aa15.39■□□□□ 0.05
TPM3-206ENST00000330188 RNPEPQ9H4A4 650 aa15.39■□□□□ 0.05
TPM3-206ENST00000330188 CCDC134Q9H6E4 229 aa15.39■□□□□ 0.05
TPM3-206ENST00000330188 RPF1Q9H9Y2 349 aaKnown RBP15.39■□□□□ 0.05
TPM3-206ENST00000330188 NXF1Q9UBU9 619 aaKnown RBP15.39■□□□□ 0.05
TPM3-206ENST00000330188 hCG_1818297A0A087WSY0 165 aa15.38■□□□□ 0.05
TPM3-206ENST00000330188 IL18RAPO95256 599 aa15.38■□□□□ 0.05
TPM3-206ENST00000330188 OSBPP22059 807 aa15.38■□□□□ 0.05
TPM3-206ENST00000330188 LACTBP83111 547 aaPredicted RBP15.38■□□□□ 0.05
TPM3-206ENST00000330188 TTLL4Q14679 1199 aa15.38■□□□□ 0.05
TPM3-206ENST00000330188 TTC31Q49AM3 519 aaPredicted RBP15.38■□□□□ 0.05
TPM3-206ENST00000330188 WDR78Q5VTH9 848 aa15.38■□□□□ 0.05
TPM3-206ENST00000330188 RELL1Q8IUW5 271 aa15.38■□□□□ 0.05
TPM3-206ENST00000330188 CACNA2D3Q8IZS8 1091 aa15.38■□□□□ 0.05
TPM3-206ENST00000330188 GLIS1Q8NBF1 620 aa15.38■□□□□ 0.05
TPM3-206ENST00000330188 OPTNQ96CV9 577 aa15.38■□□□□ 0.05
TPM3-206ENST00000330188 NFKBIZQ9BYH8 718 aa15.38■□□□□ 0.05
TPM3-206ENST00000330188 BCO2Q9BYV7 579 aa15.38■□□□□ 0.05
TPM3-206ENST00000330188 FHDC1Q9C0D6 1143 aaPredicted RBP15.38■□□□□ 0.05
TPM3-206ENST00000330188 MROH8Q9H579 483 aa15.38■□□□□ 0.05
TPM3-206ENST00000330188 DDX56Q9NY93 547 aaKnown RBP15.38■□□□□ 0.05
TPM3-206ENST00000330188 GPR25O00155 361 aa15.38■□□□□ 0.05
TPM3-206ENST00000330188 TCEA3O75764 348 aa15.38■□□□□ 0.05
TPM3-206ENST00000330188 FSBPO95073 299 aa15.38■□□□□ 0.05
TPM3-206ENST00000330188 NFICP08651 508 aa15.38■□□□□ 0.05
TPM3-206ENST00000330188 KRT19P08727 400 aa15.38■□□□□ 0.05
TPM3-206ENST00000330188 TTLL12Q14166 644 aaPredicted RBP15.38■□□□□ 0.05
TPM3-206ENST00000330188 CNGA2Q16280 664 aa15.38■□□□□ 0.05
TPM3-206ENST00000330188 P3H1Q32P28 736 aa15.38■□□□□ 0.05
TPM3-206ENST00000330188 EAPPQ56P03 285 aaPredicted RBP15.38■□□□□ 0.05
TPM3-206ENST00000330188 RNF187Q5TA31 235 aaPredicted RBP15.38■□□□□ 0.05
TPM3-206ENST00000330188 GKAP1Q5VSY0 366 aaPredicted RBP15.38■□□□□ 0.05
TPM3-206ENST00000330188 TMEM130Q8N3G9 435 aa15.38■□□□□ 0.05
TPM3-206ENST00000330188 C1orf127Q8N9H9 656 aa15.38■□□□□ 0.05
TPM3-206ENST00000330188 ACSF2Q96CM8 615 aaPredicted RBP15.38■□□□□ 0.05
TPM3-206ENST00000330188 PRMT1Q99873 361 aaKnown RBP15.38■□□□□ 0.05
TPM3-206ENST00000330188 SDCBP2Q9H190 292 aa15.38■□□□□ 0.05
TPM3-206ENST00000330188 LHX5Q9H2C1 402 aa15.38■□□□□ 0.05
TPM3-206ENST00000330188 IFT122Q9HBG6 1241 aa15.38■□□□□ 0.05
TPM3-206ENST00000330188 CTNNAL1Q9UBT7 734 aa15.38■□□□□ 0.05
TPM3-206ENST00000330188 TJP2Q9UDY2 1190 aa15.38■□□□□ 0.05
TPM3-206ENST00000330188 CYTH4Q9UIA0 394 aa15.38■□□□□ 0.05
TPM3-206ENST00000330188 STRIP2Q9ULQ0 834 aa15.38■□□□□ 0.05
TPM3-206ENST00000330188 ITGBL1O95965 494 aaPredicted RBP15.37■□□□□ 0.05
TPM3-206ENST00000330188 CD19P15391 556 aa15.37■□□□□ 0.05
TPM3-206ENST00000330188 CDKN2BP42772 138 aa15.37■□□□□ 0.05
TPM3-206ENST00000330188 RAD23BP54727 409 aa15.37■□□□□ 0.05
TPM3-206ENST00000330188 TFDP3Q5H9I0 405 aa15.37■□□□□ 0.05
TPM3-206ENST00000330188 ZNF667Q5HYK9 610 aa15.37■□□□□ 0.05
TPM3-206ENST00000330188 ZCCHC9Q8N567 271 aaKnown RBP15.37■□□□□ 0.05
TPM3-206ENST00000330188 ALLCQ8N6M5 410 aa15.37■□□□□ 0.05
TPM3-206ENST00000330188 CCHCR1Q8TD31 782 aa15.37■□□□□ 0.05
TPM3-206ENST00000330188 ARHGEF2Q92974 986 aaKnown RBP15.37■□□□□ 0.05
TPM3-206ENST00000330188 CABS1Q96KC9 395 aa15.37■□□□□ 0.05
TPM3-206ENST00000330188 PRMT7Q9NVM4 692 aaPredicted RBP15.37■□□□□ 0.05
TPM3-206ENST00000330188 ERAP1Q9NZ08 941 aa15.37■□□□□ 0.05
TPM3-206ENST00000330188 LOC102724159A0A0B4J2E5 919 aa15.37■□□□□ 0.05
TPM3-206ENST00000330188 SIGLEC16A6NMB1 481 aa15.37■□□□□ 0.05
TPM3-206ENST00000330188 LACTBL1A8MY62 500 aa15.37■□□□□ 0.05
TPM3-206ENST00000330188 GOLGA8SH3BPF8 625 aa15.37■□□□□ 0.05
TPM3-206ENST00000330188 DNALI1O14645 258 aaPredicted RBP15.37■□□□□ 0.05
TPM3-206ENST00000330188 MED7O43513 233 aa15.37■□□□□ 0.05
TPM3-206ENST00000330188 ATP5DP30049 168 aa15.37■□□□□ 0.05
TPM3-206ENST00000330188 CDH8P55286 799 aa15.37■□□□□ 0.05
TPM3-206ENST00000330188 IGBP1P78318 339 aa15.37■□□□□ 0.05
TPM3-206ENST00000330188 PWP2Q15269 919 aaKnown RBP15.37■□□□□ 0.05
TPM3-206ENST00000330188 AMHR2Q16671 573 aa15.37■□□□□ 0.05
TPM3-206ENST00000330188 FAM187BQ17R55 369 aa15.37■□□□□ 0.05
TPM3-206ENST00000330188 WDR72Q3MJ13 1102 aa15.37■□□□□ 0.05
TPM3-206ENST00000330188 FASTKD5Q7L8L6 764 aaKnown RBP15.37■□□□□ 0.05
TPM3-206ENST00000330188 JOSD2Q8TAC2 188 aa15.37■□□□□ 0.05
TPM3-206ENST00000330188 KAT2BQ92831 832 aa15.37■□□□□ 0.05
TPM3-206ENST00000330188 C9orf72Q96LT7 481 aa15.37■□□□□ 0.05
TPM3-206ENST00000330188 FOXP3Q9BZS1 431 aa15.37■□□□□ 0.05
TPM3-206ENST00000330188 RNF181Q9P0P0 153 aa15.37■□□□□ 0.05
TPM3-206ENST00000330188 ZNF148Q9UQR1 794 aa15.37■□□□□ 0.05
TPM3-206ENST00000330188 DRG1Q9Y295 367 aaKnown RBP15.37■□□□□ 0.05
TPM3-206ENST00000330188 PLXNA1Q9UIW2 1896 aa15.37■□□□□ 0.05
TPM3-206ENST00000330188 LRRD1A4D1F6 860 aa15.36■□□□□ 0.05
TPM3-206ENST00000330188 ASB14A6NK59 587 aa15.36■□□□□ 0.05
TPM3-206ENST00000330188 C3orf70A6NLC5 250 aaPredicted RBP15.36■□□□□ 0.05
TPM3-206ENST00000330188 ZSCAN5DPP0CG00 497 aa15.36■□□□□ 0.05
TPM3-206ENST00000330188 STAG3L1P0CL83 205 aa15.36■□□□□ 0.05
TPM3-206ENST00000330188 INSRRP14616 1297 aa15.36■□□□□ 0.05
TPM3-206ENST00000330188 CREB1P16220 341 aa15.36■□□□□ 0.05
TPM3-206ENST00000330188 POLR2BP30876 1174 aaKnown RBP15.36■□□□□ 0.05
Retrieved 100 of 20,778 RNA–protein pairs in 23.5 ms