RNA–Protein interactions for RNA: ENST00000327908.3

LRIT3-201, Transcript of leucine rich repeat, Ig-like and transmembrane domains 3, humanhuman

TSL 2 BASIC

Gene LRIT3, Length 3,781 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRIT3-201ENST00000327908 ZNF557Q8N988 423 aaPredicted RBP5.5□□□□□ -1.53
LRIT3-201ENST00000327908 GLIS3Q8NEA6 775 aa5.5□□□□□ -1.53
LRIT3-201ENST00000327908 OR6B3Q8NGW1 331 aa5.5□□□□□ -1.53
LRIT3-201ENST00000327908 TMEM176AQ96HP8 235 aa5.5□□□□□ -1.53
LRIT3-201ENST00000327908 HNRNPABQ99729 332 aaKnown RBP5.5□□□□□ -1.53
LRIT3-201ENST00000327908 TSGA10Q9BZW7 698 aa5.5□□□□□ -1.53
LRIT3-201ENST00000327908 NKX2-4Q9H2Z4 354 aa5.5□□□□□ -1.53
LRIT3-201ENST00000327908 RETREG1Q9H6L5 497 aa5.5□□□□□ -1.53
LRIT3-201ENST00000327908 SFXN1Q9H9B4 322 aa5.5□□□□□ -1.53
LRIT3-201ENST00000327908 PRDM16Q9HAZ2 1276 aa5.5□□□□□ -1.53
LRIT3-201ENST00000327908 AIPL1Q9NZN9 384 aa5.5□□□□□ -1.53
LRIT3-201ENST00000327908 TUBGCP4Q9UGJ1 667 aa5.5□□□□□ -1.53
LRIT3-201ENST00000327908 SIX4Q9UIU6 781 aa5.5□□□□□ -1.53
LRIT3-201ENST00000327908 SIK3Q9Y2K2 1263 aa5.5□□□□□ -1.53
LRIT3-201ENST00000327908 CASTOR2A6NHX0 329 aa5.5□□□□□ -1.53
LRIT3-201ENST00000327908 CILPO75339 1184 aa5.5□□□□□ -1.53
LRIT3-201ENST00000327908 CSDE1O75534 798 aaKnown RBP5.5□□□□□ -1.53
LRIT3-201ENST00000327908 EFEMP2O95967 443 aa5.5□□□□□ -1.53
LRIT3-201ENST00000327908 FAM200BP0CF97 657 aa5.5□□□□□ -1.53
LRIT3-201ENST00000327908 GZMAP12544 262 aa5.5□□□□□ -1.53
LRIT3-201ENST00000327908 UCHL3P15374 230 aa5.5□□□□□ -1.53
LRIT3-201ENST00000327908 ITGB8P26012 769 aa5.5□□□□□ -1.53
LRIT3-201ENST00000327908 ALDH1A3P47895 512 aa5.5□□□□□ -1.53
LRIT3-201ENST00000327908 KRT83P78385 493 aa5.5□□□□□ -1.53
LRIT3-201ENST00000327908 GOLGA8FQ08AF8 430 aa5.5□□□□□ -1.53
LRIT3-201ENST00000327908 GOLGA8DPQ0D2H9 430 aa5.5□□□□□ -1.53
LRIT3-201ENST00000327908 TAF12Q16514 161 aa5.5□□□□□ -1.53
LRIT3-201ENST00000327908 CFAP221Q4G0U5 840 aa5.5□□□□□ -1.53
LRIT3-201ENST00000327908 TMEM184AQ6ZMB5 413 aa5.5□□□□□ -1.53
LRIT3-201ENST00000327908 TCEAL8Q8IYN2 117 aa5.5□□□□□ -1.53
LRIT3-201ENST00000327908 MYCBPAPQ8TBZ2 947 aa5.5□□□□□ -1.53
LRIT3-201ENST00000327908 TAS1R2Q8TE23 839 aa5.5□□□□□ -1.53
LRIT3-201ENST00000327908 XYLT2Q9H1B5 865 aa5.5□□□□□ -1.53
LRIT3-201ENST00000327908 RNF39Q9H2S5 420 aa5.5□□□□□ -1.53
LRIT3-201ENST00000327908 KIF9Q9HAQ2 790 aa5.5□□□□□ -1.53
LRIT3-201ENST00000327908 UBE2TQ9NPD8 197 aaPredicted RBP5.5□□□□□ -1.53
LRIT3-201ENST00000327908 DMAP1Q9NPF5 467 aaPredicted RBP5.5□□□□□ -1.53
LRIT3-201ENST00000327908 DONSONQ9NYP3 566 aa5.5□□□□□ -1.53
LRIT3-201ENST00000327908 PLAGL2Q9UPG8 496 aa5.5□□□□□ -1.53
LRIT3-201ENST00000327908 PRG3Q9Y2Y8 225 aaPredicted RBP5.5□□□□□ -1.53
LRIT3-201ENST00000327908 CXCL14O95715 111 aa5.5□□□□□ -1.53
LRIT3-201ENST00000327908 KRT5P13647 590 aa5.5□□□□□ -1.53
LRIT3-201ENST00000327908 CPB1P15086 417 aa5.5□□□□□ -1.53
LRIT3-201ENST00000327908 WEE1P30291 646 aa5.5□□□□□ -1.53
LRIT3-201ENST00000327908 CDC25CP30307 473 aa5.5□□□□□ -1.53
LRIT3-201ENST00000327908 KRT9P35527 623 aa5.5□□□□□ -1.53
LRIT3-201ENST00000327908 CLCNKBP51801 687 aa5.5□□□□□ -1.53
LRIT3-201ENST00000327908 ITIH3Q06033 890 aa5.5□□□□□ -1.53
LRIT3-201ENST00000327908 BST2Q10589 180 aaKnown RBP5.5□□□□□ -1.53
LRIT3-201ENST00000327908 HS1BP3Q53T59 392 aa5.5□□□□□ -1.53
LRIT3-201ENST00000327908 VARS2Q5ST30 1063 aaKnown RBP5.5□□□□□ -1.53
LRIT3-201ENST00000327908 IQCEQ6IPM2 695 aa5.5□□□□□ -1.53
LRIT3-201ENST00000327908 TOGARAM2Q6ZUX3 1019 aa5.5□□□□□ -1.53
LRIT3-201ENST00000327908 FAM71AQ8IYT1 594 aa5.5□□□□□ -1.53
LRIT3-201ENST00000327908 VPS52Q8N1B4 723 aa5.5□□□□□ -1.53
LRIT3-201ENST00000327908 UBR7Q8N806 425 aa5.5□□□□□ -1.53
LRIT3-201ENST00000327908 RBBP8NLQ8NC74 664 aaPredicted RBP5.5□□□□□ -1.53
LRIT3-201ENST00000327908 STKLD1Q8NE28 680 aa5.5□□□□□ -1.53
LRIT3-201ENST00000327908 GSTCDQ8NEC7 633 aa5.5□□□□□ -1.53
LRIT3-201ENST00000327908 OR5B17Q8NGF7 314 aa5.5□□□□□ -1.53
LRIT3-201ENST00000327908 SPPL3Q8TCT6 385 aa5.5□□□□□ -1.53
LRIT3-201ENST00000327908 RIN2Q8WYP3 895 aaPredicted RBP5.5□□□□□ -1.53
LRIT3-201ENST00000327908 MED15Q96RN5 788 aa5.5□□□□□ -1.53
LRIT3-201ENST00000327908 GANQ9H2C0 597 aa5.5□□□□□ -1.53
LRIT3-201ENST00000327908 MARCH5Q9NX47 278 aa5.5□□□□□ -1.53
LRIT3-201ENST00000327908 SCINQ9Y6U3 715 aa5.5□□□□□ -1.53
LRIT3-201ENST00000327908 ANK1P16157 1881 aa5.49□□□□□ -1.53
LRIT3-201ENST00000327908 SCN5AQ14524 2016 aa5.49□□□□□ -1.53
LRIT3-201ENST00000327908 EIF3CLB5ME19 914 aaKnown RBP5.49□□□□□ -1.53
LRIT3-201ENST00000327908 LRG1P02750 347 aa5.49□□□□□ -1.53
LRIT3-201ENST00000327908 PTPN1P18031 435 aaKnown RBP5.49□□□□□ -1.53
LRIT3-201ENST00000327908 TNFAIP3P21580 790 aa5.49□□□□□ -1.53
LRIT3-201ENST00000327908 PBX1P40424 430 aa5.49□□□□□ -1.53
LRIT3-201ENST00000327908 EPHB4P54760 987 aa5.49□□□□□ -1.53
LRIT3-201ENST00000327908 GSCP56915 257 aaPredicted RBP5.49□□□□□ -1.53
LRIT3-201ENST00000327908 SPA17Q15506 151 aa5.49□□□□□ -1.53
LRIT3-201ENST00000327908 DUSP6Q16828 381 aa5.49□□□□□ -1.53
LRIT3-201ENST00000327908 C1orf220Q5T0J3 134 aa5.49□□□□□ -1.53
LRIT3-201ENST00000327908 KIAA0319Q5VV43 1072 aa5.49□□□□□ -1.53
LRIT3-201ENST00000327908 ARCQ7LC44 396 aa5.49□□□□□ -1.53
LRIT3-201ENST00000327908 PDCL2Q8N4E4 241 aa5.49□□□□□ -1.53
LRIT3-201ENST00000327908 EFHBQ8N7U6 833 aa5.49□□□□□ -1.53
LRIT3-201ENST00000327908 KCTD13Q8WZ19 329 aa5.49□□□□□ -1.53
LRIT3-201ENST00000327908 ERCC4Q92889 916 aaPredicted RBP5.49□□□□□ -1.53
LRIT3-201ENST00000327908 NXPE3Q969Y0 559 aa5.49□□□□□ -1.53
LRIT3-201ENST00000327908 ZFP42Q96MM3 310 aa5.49□□□□□ -1.53
LRIT3-201ENST00000327908 ZMAT2Q96NC0 199 aaKnown RBP5.49□□□□□ -1.53
LRIT3-201ENST00000327908 EIF3CQ99613 913 aaKnown RBP5.49□□□□□ -1.53
LRIT3-201ENST00000327908 DDX50Q9BQ39 737 aaKnown RBP5.49□□□□□ -1.53
LRIT3-201ENST00000327908 MED10Q9BTT4 135 aa5.49□□□□□ -1.53
LRIT3-201ENST00000327908 PBX4Q9BYU1 374 aa5.49□□□□□ -1.53
LRIT3-201ENST00000327908 DEF6Q9H4E7 631 aa5.49□□□□□ -1.53
LRIT3-201ENST00000327908 POLD4Q9HCU8 107 aa5.49□□□□□ -1.53
LRIT3-201ENST00000327908 CISHQ9NSE2 258 aa5.49□□□□□ -1.53
LRIT3-201ENST00000327908 DDX43Q9NXZ2 648 aaKnown RBP5.49□□□□□ -1.53
LRIT3-201ENST00000327908 NXF1Q9UBU9 619 aaKnown RBP5.49□□□□□ -1.53
LRIT3-201ENST00000327908 STXBP5LQ9Y2K9 1186 aa5.49□□□□□ -1.53
LRIT3-201ENST00000327908 HES2Q9Y543 173 aa5.49□□□□□ -1.53
LRIT3-201ENST00000327908 DDHD2O94830 711 aa5.49□□□□□ -1.53
LRIT3-201ENST00000327908 VNN1O95497 513 aa5.49□□□□□ -1.53
Retrieved 100 of 20,778 RNA–protein pairs in 14.6 ms