RNA–Protein interactions for RNA: ENST00000327367.8

SMAD3-201, Transcript of SMAD family member 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMAD3, Length 6,247 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD3-201ENST00000327367 MB21D2Q8IYB1 491 aaPredicted RBP17.14■□□□□ 0.33
SMAD3-201ENST00000327367 FAM129AQ9BZQ8 928 aa17.14■□□□□ 0.33
SMAD3-201ENST00000327367 RAVER2Q9HCJ3 691 aaKnown RBP17.14■□□□□ 0.33
SMAD3-201ENST00000327367 DNAJC16Q9Y2G8 782 aa17.14■□□□□ 0.33
SMAD3-201ENST00000327367 ITIH6Q6UXX5 1313 aa17.14■□□□□ 0.33
SMAD3-201ENST00000327367 NR5A2O00482 541 aa17.13■□□□□ 0.33
SMAD3-201ENST00000327367 TNFRSF21O75509 655 aa17.13■□□□□ 0.33
SMAD3-201ENST00000327367 CSTF3Q12996 717 aaKnown RBP17.13■□□□□ 0.33
SMAD3-201ENST00000327367 EFHC1Q5JVL4 640 aa17.13■□□□□ 0.33
SMAD3-201ENST00000327367 ZBTB46Q86UZ6 589 aa17.13■□□□□ 0.33
SMAD3-201ENST00000327367 DEPDC7Q96QD5 511 aa17.13■□□□□ 0.33
SMAD3-201ENST00000327367 PARVBQ9HBI1 364 aa17.13■□□□□ 0.33
SMAD3-201ENST00000327367 C3orf70A6NLC5 250 aaPredicted RBP17.13■□□□□ 0.33
SMAD3-201ENST00000327367 PPEF1O14829 653 aaPredicted RBP17.13■□□□□ 0.33
SMAD3-201ENST00000327367 LGR5O75473 907 aa17.13■□□□□ 0.33
SMAD3-201ENST00000327367 RALAP11233 206 aa17.13■□□□□ 0.33
SMAD3-201ENST00000327367 ABCC2Q92887 1545 aa17.13■□□□□ 0.33
SMAD3-201ENST00000327367 PTPRHQ9HD43 1115 aa17.13■□□□□ 0.33
SMAD3-201ENST00000327367 TAGLN3Q9UI15 199 aa17.13■□□□□ 0.33
SMAD3-201ENST00000327367 MAP3K6O95382 1288 aa17.13■□□□□ 0.33
SMAD3-201ENST00000327367 MYBP10242 640 aa17.13■□□□□ 0.33
SMAD3-201ENST00000327367 FGFR3P22607 806 aa17.13■□□□□ 0.33
SMAD3-201ENST00000327367 FEN1P39748 380 aaKnown RBP17.13■□□□□ 0.33
SMAD3-201ENST00000327367 NUMBP49757 651 aa17.13■□□□□ 0.33
SMAD3-201ENST00000327367 CSNK2BP67870 215 aa17.13■□□□□ 0.33
SMAD3-201ENST00000327367 SLC44A2Q8IWA5 706 aaPredicted RBP17.13■□□□□ 0.33
SMAD3-201ENST00000327367 SPATA18Q8TC71 538 aa17.13■□□□□ 0.33
SMAD3-201ENST00000327367 UNKQ9C0B0 810 aaKnown RBP17.13■□□□□ 0.33
SMAD3-201ENST00000327367 ADGRA3Q8IWK6 1321 aa17.13■□□□□ 0.33
SMAD3-201ENST00000327367 ERVV-2B6SEH9 535 aa17.13■□□□□ 0.33
SMAD3-201ENST00000327367 ZNF197O14709 1029 aa17.13■□□□□ 0.33
SMAD3-201ENST00000327367 MYL3P08590 195 aa17.13■□□□□ 0.33
SMAD3-201ENST00000327367 CAMSAP3Q9P1Y5 1249 aaPredicted RBP17.13■□□□□ 0.33
SMAD3-201ENST00000327367 XDHP47989 1333 aa17.13■□□□□ 0.33
SMAD3-201ENST00000327367 ZBTB5O15062 677 aa17.12■□□□□ 0.33
SMAD3-201ENST00000327367 FAM20BO75063 409 aa17.12■□□□□ 0.33
SMAD3-201ENST00000327367 CALB2P22676 271 aa17.12■□□□□ 0.33
SMAD3-201ENST00000327367 TTC23LQ6PF05 361 aa17.12■□□□□ 0.33
SMAD3-201ENST00000327367 WDR60Q8WVS4 1066 aa17.12■□□□□ 0.33
SMAD3-201ENST00000327367 FHDC1Q9C0D6 1143 aaPredicted RBP17.12■□□□□ 0.33
SMAD3-201ENST00000327367 FAM49BQ9NUQ9 324 aa17.12■□□□□ 0.33
SMAD3-201ENST00000327367 GABBR1Q9UBS5 961 aa17.12■□□□□ 0.33
SMAD3-201ENST00000327367 RAG1P15918 1043 aa17.12■□□□□ 0.33
SMAD3-201ENST00000327367 NUP62P37198 522 aaPredicted RBP17.12■□□□□ 0.33
SMAD3-201ENST00000327367 RPS7P62081 194 aaKnown RBP17.12■□□□□ 0.33
SMAD3-201ENST00000327367 DEFB107AQ8IZN7 70 aa17.12■□□□□ 0.33
SMAD3-201ENST00000327367 CDHR1Q96JP9 859 aa17.12■□□□□ 0.33
SMAD3-201ENST00000327367 VTA1Q9NP79 307 aa17.12■□□□□ 0.33
SMAD3-201ENST00000327367 SPRP35270 261 aaPredicted RBP17.12■□□□□ 0.33
SMAD3-201ENST00000327367 ATP2C1P98194 919 aaPredicted RBP17.12■□□□□ 0.33
SMAD3-201ENST00000327367 CYP4A22Q5TCH4 519 aa17.12■□□□□ 0.33
SMAD3-201ENST00000327367 PDPK2PQ6A1A2 396 aa17.12■□□□□ 0.33
SMAD3-201ENST00000327367 ANKS3Q6ZW76 656 aa17.12■□□□□ 0.33
SMAD3-201ENST00000327367 CHMP1BQ7LBR1 199 aa17.12■□□□□ 0.33
SMAD3-201ENST00000327367 ZSCAN18Q8TBC5 510 aaPredicted RBP17.12■□□□□ 0.33
SMAD3-201ENST00000327367 FAM136AQ96C01 138 aa17.12■□□□□ 0.33
SMAD3-201ENST00000327367 YIPF2Q9BWQ6 316 aa17.12■□□□□ 0.33
SMAD3-201ENST00000327367 CEP44Q9C0F1 390 aa17.12■□□□□ 0.33
SMAD3-201ENST00000327367 CYP4F12Q9HCS2 524 aa17.12■□□□□ 0.33
SMAD3-201ENST00000327367 JAK3P52333 1124 aa17.12■□□□□ 0.33
SMAD3-201ENST00000327367 ERVK-24P63145 666 aa17.12■□□□□ 0.33
SMAD3-201ENST00000327367 MMRN1Q13201 1228 aa17.12■□□□□ 0.33
SMAD3-201ENST00000327367 PDZK1Q5T2W1 519 aa17.12■□□□□ 0.33
SMAD3-201ENST00000327367 LRRC74BQ6ZQY2 392 aa17.12■□□□□ 0.33
SMAD3-201ENST00000327367 LRRC8DQ7L1W4 858 aa17.12■□□□□ 0.33
SMAD3-201ENST00000327367 DGKHQ86XP1 1220 aa17.12■□□□□ 0.33
SMAD3-201ENST00000327367 IPMKQ8NFU5 416 aa17.12■□□□□ 0.33
SMAD3-201ENST00000327367 TRIM63Q969Q1 353 aa17.12■□□□□ 0.33
SMAD3-201ENST00000327367 STK33Q9BYT3 514 aa17.12■□□□□ 0.33
SMAD3-201ENST00000327367 EHD4Q9H223 541 aa17.12■□□□□ 0.33
SMAD3-201ENST00000327367 POLG2Q9UHN1 485 aa17.12■□□□□ 0.33
SMAD3-201ENST00000327367 ALG6Q9Y672 507 aa17.12■□□□□ 0.33
SMAD3-201ENST00000327367 CUL7Q14999 1698 aa17.12■□□□□ 0.33
SMAD3-201ENST00000327367 TRIM72Q6ZMU5 477 aa17.12■□□□□ 0.33
SMAD3-201ENST00000327367 C1orf131Q8NDD1 294 aaKnown RBP17.12■□□□□ 0.33
SMAD3-201ENST00000327367 SEPHS2Q99611 448 aa17.12■□□□□ 0.33
SMAD3-201ENST00000327367 KIAA1586Q9HCI6 787 aa17.12■□□□□ 0.33
SMAD3-201ENST00000327367 LATS2Q9NRM7 1088 aa17.12■□□□□ 0.33
SMAD3-201ENST00000327367 STK32BQ9NY57 414 aa17.12■□□□□ 0.33
SMAD3-201ENST00000327367 PGK2P07205 417 aa17.11■□□□□ 0.33
SMAD3-201ENST00000327367 PTPN4P29074 926 aa17.11■□□□□ 0.33
SMAD3-201ENST00000327367 INAQ16352 499 aa17.11■□□□□ 0.33
SMAD3-201ENST00000327367 RNF148Q8N7C7 305 aa17.11■□□□□ 0.33
SMAD3-201ENST00000327367 TERB1Q8NA31 727 aa17.11■□□□□ 0.33
SMAD3-201ENST00000327367 GCNAQ96QF7 691 aa17.11■□□□□ 0.33
SMAD3-201ENST00000327367 ATP6V1HQ9UI12 483 aa17.11■□□□□ 0.33
SMAD3-201ENST00000327367 NDUFS3O75489 264 aa17.11■□□□□ 0.33
SMAD3-201ENST00000327367 ZNF682O95780 498 aa17.11■□□□□ 0.33
SMAD3-201ENST00000327367 HMBSP08397 361 aa17.11■□□□□ 0.33
SMAD3-201ENST00000327367 OTUD3Q5T2D3 398 aaPredicted RBP17.11■□□□□ 0.33
SMAD3-201ENST00000327367 RNF19BQ6ZMZ0 732 aa17.11■□□□□ 0.33
SMAD3-201ENST00000327367 ZNF341Q9BYN7 854 aa17.11■□□□□ 0.33
SMAD3-201ENST00000327367 RXFP1Q9HBX9 757 aa17.11■□□□□ 0.33
SMAD3-201ENST00000327367 KCNJ6P48051 423 aa17.11■□□□□ 0.33
SMAD3-201ENST00000327367 RTL3Q8N8U3 475 aaKnown RBP17.11■□□□□ 0.33
SMAD3-201ENST00000327367 APPL2Q8NEU8 664 aa17.11■□□□□ 0.33
SMAD3-201ENST00000327367 CLEC4MQ9H2X3 399 aaPredicted RBP17.11■□□□□ 0.33
SMAD3-201ENST00000327367 RUVBL2Q9Y230 463 aaKnown RBP17.11■□□□□ 0.33
SMAD3-201ENST00000327367 ITSN2Q9NZM3 1697 aa17.11■□□□□ 0.33
SMAD3-201ENST00000327367 PDGFRAP16234 1089 aa17.11■□□□□ 0.33
Retrieved 100 of 20,778 RNA–protein pairs in 20.9 ms