RNA–Protein interactions for RNA: ENST00000324862.6

PRPF3-201, Transcript of pre-mRNA processing factor 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PRPF3, Length 2,433 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF3-201ENST00000324862 DDX43Q9NXZ2 648 aaKnown RBP16.28■□□□□ 0.2
PRPF3-201ENST00000324862 ADGRG1Q9Y653 693 aa16.28■□□□□ 0.2
PRPF3-201ENST00000324862 TACC1O75410 805 aa16.27■□□□□ 0.2
PRPF3-201ENST00000324862 ATP2A2P16615 1042 aaKnown RBP16.27■□□□□ 0.2
PRPF3-201ENST00000324862 HERC6Q8IVU3 1022 aa16.27■□□□□ 0.2
PRPF3-201ENST00000324862 SLC30A5Q8TAD4 765 aa16.27■□□□□ 0.2
PRPF3-201ENST00000324862 SUSD3Q96L08 255 aa16.27■□□□□ 0.2
PRPF3-201ENST00000324862 VN1R3Q9BXE9 311 aa16.27■□□□□ 0.2
PRPF3-201ENST00000324862 NT5C1AQ9BXI3 368 aa16.27■□□□□ 0.2
PRPF3-201ENST00000324862 SNX25Q9H3E2 840 aa16.27■□□□□ 0.2
PRPF3-201ENST00000324862 TRIM10Q9UDY6 481 aa16.27■□□□□ 0.2
PRPF3-201ENST00000324862 M0QZQ0 153 aa16.27■□□□□ 0.19
PRPF3-201ENST00000324862 GABRDO14764 452 aa16.27■□□□□ 0.19
PRPF3-201ENST00000324862 ARHGEF15O94989 841 aa16.27■□□□□ 0.19
PRPF3-201ENST00000324862 TNFAIP3P21580 790 aa16.27■□□□□ 0.19
PRPF3-201ENST00000324862 ALDH7A1P49419 539 aaKnown RBP16.27■□□□□ 0.19
PRPF3-201ENST00000324862 CDR2Q01850 454 aa16.27■□□□□ 0.19
PRPF3-201ENST00000324862 SLC18A3Q16572 532 aa16.27■□□□□ 0.19
PRPF3-201ENST00000324862 FAM171A1Q5VUB5 890 aa16.27■□□□□ 0.19
PRPF3-201ENST00000324862 CYFIP2Q96F07 1278 aa16.27■□□□□ 0.19
PRPF3-201ENST00000324862 CHORDC1Q9UHD1 332 aaPredicted RBP16.27■□□□□ 0.19
PRPF3-201ENST00000324862 NAGPAQ9UK23 515 aa16.27■□□□□ 0.19
PRPF3-201ENST00000324862 BZW2Q9Y6E2 419 aaKnown RBP16.27■□□□□ 0.19
PRPF3-201ENST00000324862 NRDCO43847 1150 aa16.26■□□□□ 0.19
PRPF3-201ENST00000324862 CCDC130P13994 396 aa16.26■□□□□ 0.19
PRPF3-201ENST00000324862 PPP1R26Q5T8A7 1209 aaPredicted RBP16.26■□□□□ 0.19
PRPF3-201ENST00000324862 KCNT2Q6UVM3 1135 aa16.26■□□□□ 0.19
PRPF3-201ENST00000324862 OR10T2Q8NGX3 314 aa16.26■□□□□ 0.19
PRPF3-201ENST00000324862 FAXDC2Q96IV6 333 aa16.26■□□□□ 0.19
PRPF3-201ENST00000324862 PPP2R2CQ9Y2T4 447 aa16.26■□□□□ 0.19
PRPF3-201ENST00000324862 CSPG5O95196 566 aa16.26■□□□□ 0.19
PRPF3-201ENST00000324862 OR4Q2P0C623 313 aa16.26■□□□□ 0.19
PRPF3-201ENST00000324862 LINC00271P0C7V0 271 aa16.26■□□□□ 0.19
PRPF3-201ENST00000324862 CCDC172P0C7W6 258 aa16.26■□□□□ 0.19
PRPF3-201ENST00000324862 WARSP23381 471 aaKnown RBP16.26■□□□□ 0.19
PRPF3-201ENST00000324862 CYLC1P35663 651 aaPredicted RBP16.26■□□□□ 0.19
PRPF3-201ENST00000324862 YWHAEP62258 255 aaKnown RBP16.26■□□□□ 0.19
PRPF3-201ENST00000324862 FUT10Q6P4F1 479 aa16.26■□□□□ 0.19
PRPF3-201ENST00000324862 FAM43BQ6ZT52 329 aaPredicted RBP16.26■□□□□ 0.19
PRPF3-201ENST00000324862 CCDC170Q8IYT3 715 aa16.26■□□□□ 0.19
PRPF3-201ENST00000324862 CPA5Q8WXQ8 436 aa16.26■□□□□ 0.19
PRPF3-201ENST00000324862 NR2E3Q9Y5X4 410 aa16.26■□□□□ 0.19
PRPF3-201ENST00000324862 DUSP10Q9Y6W6 482 aa16.26■□□□□ 0.19
PRPF3-201ENST00000324862 MYBPHLA2RUH7 354 aa16.25■□□□□ 0.19
PRPF3-201ENST00000324862 EIF3CLB5ME19 914 aaKnown RBP16.25■□□□□ 0.19
PRPF3-201ENST00000324862 TMEM189-UBE2V1I3L0A0 370 aa16.25■□□□□ 0.19
PRPF3-201ENST00000324862 ODC1P11926 461 aa16.25■□□□□ 0.19
PRPF3-201ENST00000324862 HTRA4P83105 476 aaPredicted RBP16.25■□□□□ 0.19
PRPF3-201ENST00000324862 RTP2Q5QGT7 225 aa16.25■□□□□ 0.19
PRPF3-201ENST00000324862 CCDC122Q5T0U0 273 aa16.25■□□□□ 0.19
PRPF3-201ENST00000324862 ALKBH5Q6P6C2 394 aaKnown RBP16.25■□□□□ 0.19
PRPF3-201ENST00000324862 ZSCAN30Q86W11 494 aa16.25■□□□□ 0.19
PRPF3-201ENST00000324862 UBA3Q8TBC4 463 aa16.25■□□□□ 0.19
PRPF3-201ENST00000324862 EIF3CQ99613 913 aaKnown RBP16.25■□□□□ 0.19
PRPF3-201ENST00000324862 LACRTQ9GZZ8 138 aa16.25■□□□□ 0.19
PRPF3-201ENST00000324862 CRTAC1Q9NQ79 661 aa16.25■□□□□ 0.19
PRPF3-201ENST00000324862 CLDN5O00501 218 aa16.25■□□□□ 0.19
PRPF3-201ENST00000324862 TLL1O43897 1013 aa16.25■□□□□ 0.19
PRPF3-201ENST00000324862 BMS1Q14692 1282 aaKnown RBP16.25■□□□□ 0.19
PRPF3-201ENST00000324862 OVOS1Q6IE37 1185 aa16.25■□□□□ 0.19
PRPF3-201ENST00000324862 LLGL2Q6P1M3 1020 aa16.25■□□□□ 0.19
PRPF3-201ENST00000324862 DENND1BQ6P3S1 775 aa16.25■□□□□ 0.19
PRPF3-201ENST00000324862 PHLDB2Q86SQ0 1253 aa16.25■□□□□ 0.19
PRPF3-201ENST00000324862 CMTR2Q8IYT2 770 aaKnown RBP16.25■□□□□ 0.19
PRPF3-201ENST00000324862 WDTC1Q8N5D0 677 aa16.25■□□□□ 0.19
PRPF3-201ENST00000324862 TMEM175Q9BSA9 504 aa16.25■□□□□ 0.19
PRPF3-201ENST00000324862 COLEC11Q9BWP8 271 aa16.25■□□□□ 0.19
PRPF3-201ENST00000324862 PDCL3Q9H2J4 239 aa16.25■□□□□ 0.19
PRPF3-201ENST00000324862 RNF216Q9NWF9 866 aaPredicted RBP16.25■□□□□ 0.19
PRPF3-201ENST00000324862 GTF3C4Q9UKN8 822 aa16.25■□□□□ 0.19
PRPF3-201ENST00000324862 NENFQ9UMX5 172 aa16.25■□□□□ 0.19
PRPF3-201ENST00000324862 PCDHA13Q9Y5I0 950 aa16.25■□□□□ 0.19
PRPF3-201ENST00000324862 H0YGN5 161 aa16.24■□□□□ 0.19
PRPF3-201ENST00000324862 ADORA2BP29275 332 aa16.24■□□□□ 0.19
PRPF3-201ENST00000324862 RASIP1Q5U651 963 aa16.24■□□□□ 0.19
PRPF3-201ENST00000324862 LRRTM3Q86VH5 581 aa16.24■□□□□ 0.19
PRPF3-201ENST00000324862 CCAR2Q8N163 923 aaKnown RBP16.24■□□□□ 0.19
PRPF3-201ENST00000324862 IGSF21Q96ID5 467 aa16.24■□□□□ 0.19
PRPF3-201ENST00000324862 RNPC3Q96LT9 517 aaKnown RBP16.24■□□□□ 0.19
PRPF3-201ENST00000324862 RHOBTB2Q9BYZ6 727 aa16.24■□□□□ 0.19
PRPF3-201ENST00000324862 LZTFL1Q9NQ48 299 aa16.24■□□□□ 0.19
PRPF3-201ENST00000324862 TMLHEQ9NVH6 421 aa16.24■□□□□ 0.19
PRPF3-201ENST00000324862 CYTH4Q9UIA0 394 aa16.24■□□□□ 0.19
PRPF3-201ENST00000324862 TSPAN16Q9UKR8 245 aa16.24■□□□□ 0.19
PRPF3-201ENST00000324862 TULP2O00295 520 aa16.24■□□□□ 0.19
PRPF3-201ENST00000324862 O00370 1275 aa16.24■□□□□ 0.19
PRPF3-201ENST00000324862 LCA5LO95447 670 aa16.24■□□□□ 0.19
PRPF3-201ENST00000324862 PAEPP09466 180 aa16.24■□□□□ 0.19
PRPF3-201ENST00000324862 ABCB4P21439 1286 aa16.24■□□□□ 0.19
PRPF3-201ENST00000324862 BPIFB4P59827 614 aa16.24■□□□□ 0.19
PRPF3-201ENST00000324862 YWHAHQ04917 246 aaPredicted RBP16.24■□□□□ 0.19
PRPF3-201ENST00000324862 MDH1BQ5I0G3 518 aa16.24■□□□□ 0.19
PRPF3-201ENST00000324862 NAA35Q5VZE5 725 aa16.24■□□□□ 0.19
PRPF3-201ENST00000324862 PRSS55Q6UWB4 352 aaPredicted RBP16.24■□□□□ 0.19
PRPF3-201ENST00000324862 RSPO2Q6UXX9 243 aaPredicted RBP16.24■□□□□ 0.19
PRPF3-201ENST00000324862 REXO1L1PQ8IX06 675 aa16.24■□□□□ 0.19
PRPF3-201ENST00000324862 B3GALNT2Q8NCR0 500 aa16.24■□□□□ 0.19
PRPF3-201ENST00000324862 C1orf131Q8NDD1 294 aaKnown RBP16.24■□□□□ 0.19
PRPF3-201ENST00000324862 IRX2Q9BZI1 471 aaPredicted RBP16.24■□□□□ 0.19
PRPF3-201ENST00000324862 TJP2Q9UDY2 1190 aa16.24■□□□□ 0.19
Retrieved 100 of 20,778 RNA–protein pairs in 42.4 ms