RNA–Protein interactions for RNA: ENST00000324444.7

SYNE4-201, Transcript of spectrin repeat containing nuclear envelope family member 4, humanhuman

APPRIS P3 TSL 5 BASIC

Gene SYNE4, Length 1,354 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE4-201ENST00000324444 A0A087X0T9 212 aa19.2■□□□□ 0.66
SYNE4-201ENST00000324444 PODXLO00592 558 aa19.2■□□□□ 0.66
SYNE4-201ENST00000324444 LPXNO60711 386 aa19.2■□□□□ 0.66
SYNE4-201ENST00000324444 WEE2P0C1S8 567 aa19.2■□□□□ 0.66
SYNE4-201ENST00000324444 FAM228BP0C875 321 aa19.2■□□□□ 0.66
SYNE4-201ENST00000324444 CD58P19256 250 aa19.2■□□□□ 0.66
SYNE4-201ENST00000324444 AFF1P51825 1210 aaKnown RBP19.2■□□□□ 0.66
SYNE4-201ENST00000324444 LILRA4P59901 499 aa19.2■□□□□ 0.66
SYNE4-201ENST00000324444 ERVK-21P61565 698 aa19.2■□□□□ 0.66
SYNE4-201ENST00000324444 CLLU1OSQ5K130 101 aa19.2■□□□□ 0.66
SYNE4-201ENST00000324444 DCLRE1AQ6PJP8 1040 aa19.2■□□□□ 0.66
SYNE4-201ENST00000324444 SCARA5Q6ZMJ2 495 aa19.2■□□□□ 0.66
SYNE4-201ENST00000324444 SLC47A2Q86VL8 602 aa19.2■□□□□ 0.66
SYNE4-201ENST00000324444 REXO1L1PQ8IX06 675 aa19.2■□□□□ 0.66
SYNE4-201ENST00000324444 TMEM86AQ8N2M4 240 aa19.2■□□□□ 0.66
SYNE4-201ENST00000324444 ACRBPQ8NEB7 543 aa19.2■□□□□ 0.66
SYNE4-201ENST00000324444 APPL2Q8NEU8 664 aa19.2■□□□□ 0.66
SYNE4-201ENST00000324444 GDPD5Q8WTR4 605 aa19.2■□□□□ 0.66
SYNE4-201ENST00000324444 NT5C1AQ9BXI3 368 aa19.2■□□□□ 0.66
SYNE4-201ENST00000324444 SEPT11Q9NVA2 429 aaKnown RBP19.2■□□□□ 0.66
SYNE4-201ENST00000324444 POLIQ9UNA4 740 aa19.2■□□□□ 0.66
SYNE4-201ENST00000324444 INPP5FQ9Y2H2 1132 aa19.2■□□□□ 0.66
SYNE4-201ENST00000324444 PJA2O43164 708 aa19.19■□□□□ 0.66
SYNE4-201ENST00000324444 KIF5CO60282 957 aa19.19■□□□□ 0.66
SYNE4-201ENST00000324444 CILPO75339 1184 aa19.19■□□□□ 0.66
SYNE4-201ENST00000324444 H2AFZP0C0S5 128 aa19.19■□□□□ 0.66
SYNE4-201ENST00000324444 RNASELQ05823 741 aaKnown RBP19.19■□□□□ 0.66
SYNE4-201ENST00000324444 SKIV2LQ15477 1246 aaKnown RBP19.19■□□□□ 0.66
SYNE4-201ENST00000324444 IFI16Q16666 785 aaKnown RBP19.19■□□□□ 0.66
SYNE4-201ENST00000324444 H2AFVQ71UI9 128 aa19.19■□□□□ 0.66
SYNE4-201ENST00000324444 NOP9Q86U38 636 aaKnown RBP19.19■□□□□ 0.66
SYNE4-201ENST00000324444 GLYCTKQ8IVS8 523 aa19.19■□□□□ 0.66
SYNE4-201ENST00000324444 SP7Q8TDD2 431 aaPredicted RBP19.19■□□□□ 0.66
SYNE4-201ENST00000324444 TMEM176AQ96HP8 235 aa19.19■□□□□ 0.66
SYNE4-201ENST00000324444 MIOSQ9NXC5 875 aa19.19■□□□□ 0.66
SYNE4-201ENST00000324444 DSEQ9UL01 958 aa19.19■□□□□ 0.66
SYNE4-201ENST00000324444 COL4A4P53420 1690 aaPredicted RBP19.19■□□□□ 0.66
SYNE4-201ENST00000324444 SPTBN5Q9NRC6 3674 aaKnown RBP19.19■□□□□ 0.66
SYNE4-201ENST00000324444 DDX3XO00571 662 aaKnown RBP eCLIP19.19■□□□□ 0.665e-7■□□□□ 11.3
SYNE4-201ENST00000324444 THAP12O43422 761 aa19.19■□□□□ 0.66
SYNE4-201ENST00000324444 RTN2O75298 545 aa19.19■□□□□ 0.66
SYNE4-201ENST00000324444 KIF4AO95239 1232 aa19.19■□□□□ 0.66
SYNE4-201ENST00000324444 LSM8O95777 96 aaKnown RBP19.19■□□□□ 0.66
SYNE4-201ENST00000324444 POMCP01189 267 aa19.19■□□□□ 0.66
SYNE4-201ENST00000324444 VDRP11473 427 aa19.19■□□□□ 0.66
SYNE4-201ENST00000324444 IBSPP21815 317 aaPredicted RBP19.19■□□□□ 0.66
SYNE4-201ENST00000324444 CYP27A1Q02318 531 aa19.19■□□□□ 0.66
SYNE4-201ENST00000324444 SOX4Q06945 474 aaPredicted RBP19.19■□□□□ 0.66
SYNE4-201ENST00000324444 UPP1Q16831 310 aa19.19■□□□□ 0.66
SYNE4-201ENST00000324444 TJAP1Q5JTD0 557 aa19.19■□□□□ 0.66
SYNE4-201ENST00000324444 ATXN2LQ8WWM7 1075 aaKnown RBP19.19■□□□□ 0.66
SYNE4-201ENST00000324444 TRIM11Q96F44 468 aa19.19■□□□□ 0.66
SYNE4-201ENST00000324444 C17orf80Q9BSJ5 609 aa19.19■□□□□ 0.66
SYNE4-201ENST00000324444 ZNF518BQ9C0D4 1074 aa19.19■□□□□ 0.66
SYNE4-201ENST00000324444 SNX25Q9H3E2 840 aa19.19■□□□□ 0.66
SYNE4-201ENST00000324444 SMYD3Q9H7B4 428 aa19.19■□□□□ 0.66
SYNE4-201ENST00000324444 SCN1AP35498 2009 aa19.18■□□□□ 0.66
SYNE4-201ENST00000324444 BTNL10A8MVZ5 291 aa19.18■□□□□ 0.66
SYNE4-201ENST00000324444 TMEM189-UBE2V1I3L0A0 370 aa19.18■□□□□ 0.66
SYNE4-201ENST00000324444 TRAPPC3O43617 180 aa19.18■□□□□ 0.66
SYNE4-201ENST00000324444 FGFR1P11362 822 aa19.18■□□□□ 0.66
SYNE4-201ENST00000324444 LHX1P48742 406 aa19.18■□□□□ 0.66
SYNE4-201ENST00000324444 SCARA3Q6AZY7 606 aa19.18■□□□□ 0.66
SYNE4-201ENST00000324444 DSTYKQ6XUX3 929 aa19.18■□□□□ 0.66
SYNE4-201ENST00000324444 METTL23Q86XA0 190 aa19.18■□□□□ 0.66
SYNE4-201ENST00000324444 RNF10Q8N5U6 811 aaKnown RBP19.18■□□□□ 0.66
SYNE4-201ENST00000324444 DDX1Q92499 740 aaKnown RBP19.18■□□□□ 0.66
SYNE4-201ENST00000324444 TNIP3Q96KP6 325 aa19.18■□□□□ 0.66
SYNE4-201ENST00000324444 GOLGA2P5Q9HBQ8 144 aa19.18■□□□□ 0.66
SYNE4-201ENST00000324444 PUF60Q9UHX1 559 aaKnown RBP19.18■□□□□ 0.66
SYNE4-201ENST00000324444 PCDHGC3Q9UN70 934 aa19.18■□□□□ 0.66
SYNE4-201ENST00000324444 REXO2Q9Y3B8 237 aaKnown RBP19.18■□□□□ 0.66
SYNE4-201ENST00000324444 XIRP2A4UGR9 3374 aa19.17■□□□□ 0.66
SYNE4-201ENST00000324444 ANKRD62A6NC57 917 aa19.17■□□□□ 0.66
SYNE4-201ENST00000324444 CYB561D2O14569 222 aa19.17■□□□□ 0.66
SYNE4-201ENST00000324444 ODC1P11926 461 aa19.17■□□□□ 0.66
SYNE4-201ENST00000324444 WARSP23381 471 aaKnown RBP19.17■□□□□ 0.66
SYNE4-201ENST00000324444 CLCNKBP51801 687 aa19.17■□□□□ 0.66
SYNE4-201ENST00000324444 FMO1Q01740 532 aa19.17■□□□□ 0.66
SYNE4-201ENST00000324444 DNTTIP2Q5QJE6 756 aaKnown RBP19.17■□□□□ 0.66
SYNE4-201ENST00000324444 LIMS2Q7Z4I7 341 aa19.17■□□□□ 0.66
SYNE4-201ENST00000324444 TMEM130Q8N3G9 435 aa19.17■□□□□ 0.66
SYNE4-201ENST00000324444 MSANTD4Q8NCY6 345 aa19.17■□□□□ 0.66
SYNE4-201ENST00000324444 FBXO22Q8NEZ5 403 aa19.17■□□□□ 0.66
SYNE4-201ENST00000324444 LNX1Q8TBB1 728 aaPredicted RBP19.17■□□□□ 0.66
SYNE4-201ENST00000324444 UBE2Q2Q8WVN8 375 aa19.17■□□□□ 0.66
SYNE4-201ENST00000324444 ZNF606Q8WXB4 792 aa19.17■□□□□ 0.66
SYNE4-201ENST00000324444 CTNNBL1Q8WYA6 563 aaPredicted RBP19.17■□□□□ 0.66
SYNE4-201ENST00000324444 ELMO3Q96BJ8 720 aa19.17■□□□□ 0.66
SYNE4-201ENST00000324444 ISCUQ9H1K1 167 aa19.17■□□□□ 0.66
SYNE4-201ENST00000324444 RC3H2Q9HBD1 1191 aaKnown RBP19.17■□□□□ 0.66
SYNE4-201ENST00000324444 LZTFL1Q9NQ48 299 aa19.17■□□□□ 0.66
SYNE4-201ENST00000324444 NENFQ9UMX5 172 aa19.17■□□□□ 0.66
SYNE4-201ENST00000324444 A0A0A6YYK5 440 aaPredicted RBP19.16■□□□□ 0.66
SYNE4-201ENST00000324444 USP27XA6NNY8 438 aa19.16■□□□□ 0.66
SYNE4-201ENST00000324444 PPEF2O14830 753 aa19.16■□□□□ 0.66
SYNE4-201ENST00000324444 ZNF263O14978 683 aa19.16■□□□□ 0.66
SYNE4-201ENST00000324444 B3GAT3O94766 335 aa19.16■□□□□ 0.66
SYNE4-201ENST00000324444 MMEP08473 750 aa19.16■□□□□ 0.66
SYNE4-201ENST00000324444 TMEM253P0C7T8 217 aa19.16■□□□□ 0.66
Retrieved 100 of 20,778 RNA–protein pairs in 31.3 ms