RNA–Protein interactions for RNA: ENST00000323853.9

SNRNP200-201, Transcript of small nuclear ribonucleoprotein U5 subunit 200, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SNRNP200, Length 7,165 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRNP200-201ENST00000323853 A0A087X0T9 212 aa11.4□□□□□ -0.59
SNRNP200-201ENST00000323853 FAM228BP0C875 321 aa11.4□□□□□ -0.59
SNRNP200-201ENST00000323853 HMOX2P30519 316 aa11.4□□□□□ -0.59
SNRNP200-201ENST00000323853 TMEM62Q0P6H9 643 aa11.4□□□□□ -0.59
SNRNP200-201ENST00000323853 SNAPC2Q13487 334 aa11.4□□□□□ -0.59
SNRNP200-201ENST00000323853 ZNF555Q8NEP9 628 aa11.4□□□□□ -0.59
SNRNP200-201ENST00000323853 HPDLQ96IR7 371 aa11.4□□□□□ -0.59
SNRNP200-201ENST00000323853 HBP1O60381 514 aa11.39□□□□□ -0.59
SNRNP200-201ENST00000323853 ITGB3P05106 788 aa11.39□□□□□ -0.59
SNRNP200-201ENST00000323853 ITGA4P13612 1032 aa11.39□□□□□ -0.59
SNRNP200-201ENST00000323853 KDM4CQ9H3R0 1056 aa11.39□□□□□ -0.59
SNRNP200-201ENST00000323853 ARHGAP26Q9UNA1 814 aa11.39□□□□□ -0.59
SNRNP200-201ENST00000323853 FAM205AQ6ZU69 1335 aa11.39□□□□□ -0.59
SNRNP200-201ENST00000323853 TMEM131LA2VDJ0 1609 aa11.39□□□□□ -0.59
SNRNP200-201ENST00000323853 SEC24DO94855 1032 aaPredicted RBP11.39□□□□□ -0.59
SNRNP200-201ENST00000323853 VEPH1Q14D04 833 aa11.39□□□□□ -0.59
SNRNP200-201ENST00000323853 ANGEL2Q5VTE6 544 aaKnown RBP11.39□□□□□ -0.59
SNRNP200-201ENST00000323853 STAU2Q9NUL3 570 aaKnown RBP eCLIP11.39□□□□□ -0.59
SNRNP200-201ENST00000323853 DPP3Q9NY33 737 aa11.39□□□□□ -0.59
SNRNP200-201ENST00000323853 AIPL1Q9NZN9 384 aa11.39□□□□□ -0.59
SNRNP200-201ENST00000323853 SUPT3HB4E1H0 165 aa11.39□□□□□ -0.59
SNRNP200-201ENST00000323853 FOXN3O00409 490 aaPredicted RBP11.39□□□□□ -0.59
SNRNP200-201ENST00000323853 SUPT3HO75486 399 aa11.39□□□□□ -0.59
SNRNP200-201ENST00000323853 ENO3P13929 434 aaPredicted RBP11.39□□□□□ -0.59
SNRNP200-201ENST00000323853 HOXD10P28358 340 aa11.39□□□□□ -0.59
SNRNP200-201ENST00000323853 FDFT1P37268 417 aa11.39□□□□□ -0.59
SNRNP200-201ENST00000323853 SLC25A41Q8N5S1 370 aa11.39□□□□□ -0.59
SNRNP200-201ENST00000323853 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP11.39□□□□□ -0.59
SNRNP200-201ENST00000323853 PXDNQ92626 1479 aa11.39□□□□□ -0.59
SNRNP200-201ENST00000323853 CCDC78A2IDD5 438 aa11.39□□□□□ -0.59
SNRNP200-201ENST00000323853 TRAPPC3O43617 180 aa11.39□□□□□ -0.59
SNRNP200-201ENST00000323853 KIF1CO43896 1103 aaKnown RBP11.39□□□□□ -0.59
SNRNP200-201ENST00000323853 GNL1P36915 607 aaPredicted RBP11.39□□□□□ -0.59
SNRNP200-201ENST00000323853 FLOT2Q14254 428 aa11.39□□□□□ -0.59
SNRNP200-201ENST00000323853 CYTH1Q15438 398 aa11.39□□□□□ -0.59
SNRNP200-201ENST00000323853 NTRK3Q16288 839 aa11.39□□□□□ -0.59
SNRNP200-201ENST00000323853 PCSK7Q16549 785 aa11.39□□□□□ -0.59
SNRNP200-201ENST00000323853 TMEM154Q6P9G4 183 aa11.39□□□□□ -0.59
SNRNP200-201ENST00000323853 FBXL16Q8N461 479 aa11.39□□□□□ -0.59
SNRNP200-201ENST00000323853 THTPAQ9BU02 230 aa11.39□□□□□ -0.59
SNRNP200-201ENST00000323853 PABPC3Q9H361 631 aaKnown RBP11.39□□□□□ -0.59
SNRNP200-201ENST00000323853 ERAP1Q9NZ08 941 aa11.39□□□□□ -0.59
SNRNP200-201ENST00000323853 FARP1Q9Y4F1 1045 aaPredicted RBP11.39□□□□□ -0.59
SNRNP200-201ENST00000323853 EFHBQ8N7U6 833 aa11.39□□□□□ -0.59
SNRNP200-201ENST00000323853 CALML6Q8TD86 181 aa11.39□□□□□ -0.59
SNRNP200-201ENST00000323853 PHTF1Q9UMS5 762 aa11.39□□□□□ -0.59
SNRNP200-201ENST00000323853 AKAP10O43572 662 aa11.38□□□□□ -0.59
SNRNP200-201ENST00000323853 ATG4CQ96DT6 458 aa11.38□□□□□ -0.59
SNRNP200-201ENST00000323853 ANKZF1Q9H8Y5 726 aa11.38□□□□□ -0.59
SNRNP200-201ENST00000323853 PKD2L2Q9NZM6 624 aa11.38□□□□□ -0.59
SNRNP200-201ENST00000323853 CASZ1Q86V15 1759 aa11.38□□□□□ -0.59
SNRNP200-201ENST00000323853 SYF2O95926 243 aaKnown RBP11.38□□□□□ -0.59
SNRNP200-201ENST00000323853 CYP11B1P15538 503 aa11.38□□□□□ -0.59
SNRNP200-201ENST00000323853 KCNA3P22001 575 aa11.38□□□□□ -0.59
SNRNP200-201ENST00000323853 MED21Q13503 144 aa11.38□□□□□ -0.59
SNRNP200-201ENST00000323853 TTC23LQ6PF05 361 aa11.38□□□□□ -0.59
SNRNP200-201ENST00000323853 DCUN1D1Q96GG9 259 aa11.38□□□□□ -0.59
SNRNP200-201ENST00000323853 FRMD8Q9BZ67 464 aaPredicted RBP11.38□□□□□ -0.59
SNRNP200-201ENST00000323853 TRPC7Q9HCX4 862 aa11.38□□□□□ -0.59
SNRNP200-201ENST00000323853 CHCHD3Q9NX63 227 aaKnown RBP11.38□□□□□ -0.59
SNRNP200-201ENST00000323853 B2RBV5 119 aa11.38□□□□□ -0.59
SNRNP200-201ENST00000323853 DYNC1LI2O43237 492 aaPredicted RBP11.38□□□□□ -0.59
SNRNP200-201ENST00000323853 HMBSP08397 361 aa11.38□□□□□ -0.59
SNRNP200-201ENST00000323853 RABGAP1LQ5R372 815 aa11.38□□□□□ -0.59
SNRNP200-201ENST00000323853 CAVIN3Q969G5 261 aa11.38□□□□□ -0.59
SNRNP200-201ENST00000323853 AGXT2Q9BYV1 514 aa11.38□□□□□ -0.59
SNRNP200-201ENST00000323853 SPATA31A6Q5VVP1 1343 aa11.38□□□□□ -0.59
SNRNP200-201ENST00000323853 ZC3H4Q9UPT8 1303 aaKnown RBP11.38□□□□□ -0.59
SNRNP200-201ENST00000323853 TNPO2O14787 897 aaKnown RBP11.38□□□□□ -0.59
SNRNP200-201ENST00000323853 ZC3H11AO75152 810 aaKnown RBP eCLIP11.38□□□□□ -0.591e-6■■■■■ 27
SNRNP200-201ENST00000323853 H2AFYO75367 372 aaKnown RBP11.38□□□□□ -0.59
SNRNP200-201ENST00000323853 KRT16P08779 473 aa11.38□□□□□ -0.59
SNRNP200-201ENST00000323853 CASP4P49662 377 aa11.38□□□□□ -0.59
SNRNP200-201ENST00000323853 ERFP50548 548 aa11.38□□□□□ -0.59
SNRNP200-201ENST00000323853 RAD51Q06609 339 aa11.38□□□□□ -0.59
SNRNP200-201ENST00000323853 KRT72Q14CN4 511 aa11.38□□□□□ -0.59
SNRNP200-201ENST00000323853 DCAF6Q58WW2 860 aa11.38□□□□□ -0.59
SNRNP200-201ENST00000323853 RFWD2Q8NHY2 731 aa11.38□□□□□ -0.59
SNRNP200-201ENST00000323853 DNAJC9Q8WXX5 260 aa11.38□□□□□ -0.59
SNRNP200-201ENST00000323853 CGRRF1Q99675 332 aa11.38□□□□□ -0.59
SNRNP200-201ENST00000323853 VPS33BQ9H267 617 aa11.38□□□□□ -0.59
SNRNP200-201ENST00000323853 TADA2AO75478 443 aa11.38□□□□□ -0.59
SNRNP200-201ENST00000323853 RARBP10826 455 aa11.38□□□□□ -0.59
SNRNP200-201ENST00000323853 RPS6P62753 249 aaKnown RBP11.38□□□□□ -0.59
SNRNP200-201ENST00000323853 ZNF571Q7Z3V5 609 aaPredicted RBP11.38□□□□□ -0.59
SNRNP200-201ENST00000323853 TARS2Q9BW92 718 aaKnown RBP11.38□□□□□ -0.59
SNRNP200-201ENST00000323853 BATF3Q9NR55 127 aa11.38□□□□□ -0.59
SNRNP200-201ENST00000323853 F8VZ95 297 aa11.37□□□□□ -0.59
SNRNP200-201ENST00000323853 AIM2O14862 343 aa11.37□□□□□ -0.59
SNRNP200-201ENST00000323853 GAS2O43903 313 aaKnown RBP11.37□□□□□ -0.59
SNRNP200-201ENST00000323853 KCNA4P22459 653 aa11.37□□□□□ -0.59
SNRNP200-201ENST00000323853 SYTL3Q4VX76 610 aa11.37□□□□□ -0.59
SNRNP200-201ENST00000323853 NOTUMQ6P988 496 aa11.37□□□□□ -0.59
SNRNP200-201ENST00000323853 DENND5BQ6ZUT9 1274 aa11.37□□□□□ -0.59
SNRNP200-201ENST00000323853 NUP93Q8N1F7 819 aa11.37□□□□□ -0.59
SNRNP200-201ENST00000323853 SH3KBP1Q96B97 665 aa11.37□□□□□ -0.59
SNRNP200-201ENST00000323853 PARK7Q99497 189 aaKnown RBP11.37□□□□□ -0.59
SNRNP200-201ENST00000323853 GPBP1L1Q9HC44 474 aaPredicted RBP11.37□□□□□ -0.59
SNRNP200-201ENST00000323853 POLLQ9UGP5 575 aa11.37□□□□□ -0.59
SNRNP200-201ENST00000323853 CDY2AQ9Y6F7 541 aa11.37□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 56.4 ms