RNA–Protein interactions for RNA: ENST00000323833.12

TSFM-201, Transcript of Ts translation elongation factor, mitochondrial, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene TSFM, Length 1,218 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSFM-201ENST00000323833 TTC9BQ8N6N2 239 aa16.57■□□□□ 0.24
TSFM-201ENST00000323833 ATAD1Q8NBU5 361 aa16.57■□□□□ 0.24
TSFM-201ENST00000323833 TAS1R2Q8TE23 839 aa16.57■□□□□ 0.24
TSFM-201ENST00000323833 CEP63Q96MT8 703 aa16.57■□□□□ 0.24
TSFM-201ENST00000323833 MED15Q96RN5 788 aa16.57■□□□□ 0.24
TSFM-201ENST00000323833 RHOBTB2Q9BYZ6 727 aa16.57■□□□□ 0.24
TSFM-201ENST00000323833 TMLHEQ9NVH6 421 aa16.57■□□□□ 0.24
TSFM-201ENST00000323833 HCFC1R1Q9NWW0 138 aa16.57■□□□□ 0.24
TSFM-201ENST00000323833 SLC27A5Q9Y2P5 690 aa16.57■□□□□ 0.24
TSFM-201ENST00000323833 TTC28Q96AY4 2481 aa16.56■□□□□ 0.24
TSFM-201ENST00000323833 CLUHO75153 1309 aa16.56■□□□□ 0.24
TSFM-201ENST00000323833 LOC730098B7Z3J9 87 aa16.56■□□□□ 0.24
TSFM-201ENST00000323833 XYLBO75191 536 aa16.56■□□□□ 0.24
TSFM-201ENST00000323833 LRRN2O75325 713 aa16.56■□□□□ 0.24
TSFM-201ENST00000323833 WARSP23381 471 aaKnown RBP16.56■□□□□ 0.24
TSFM-201ENST00000323833 LMO2P25791 158 aa16.56■□□□□ 0.24
TSFM-201ENST00000323833 LHX1P48742 406 aa16.56■□□□□ 0.24
TSFM-201ENST00000323833 NLRP12P59046 1061 aa16.56■□□□□ 0.24
TSFM-201ENST00000323833 TSPY1Q01534 308 aa16.56■□□□□ 0.24
TSFM-201ENST00000323833 TWF1Q12792 350 aa16.56■□□□□ 0.24
TSFM-201ENST00000323833 CCDC142Q17RM4 750 aa16.56■□□□□ 0.24
TSFM-201ENST00000323833 SGSM1Q2NKQ1 1148 aa16.56■□□□□ 0.24
TSFM-201ENST00000323833 CCDC40Q4G0X9 1142 aa16.56■□□□□ 0.24
TSFM-201ENST00000323833 ZNF667Q5HYK9 610 aa16.56■□□□□ 0.24
TSFM-201ENST00000323833 FOXR2Q6PJQ5 311 aa16.56■□□□□ 0.24
TSFM-201ENST00000323833 SCARA5Q6ZMJ2 495 aa16.56■□□□□ 0.24
TSFM-201ENST00000323833 DCP1BQ8IZD4 617 aaKnown RBP16.56■□□□□ 0.24
TSFM-201ENST00000323833 MLKLQ8NB16 471 aa16.56■□□□□ 0.24
TSFM-201ENST00000323833 SPATA18Q8TC71 538 aa16.56■□□□□ 0.24
TSFM-201ENST00000323833 ACBD6Q9BR61 282 aa16.56■□□□□ 0.24
TSFM-201ENST00000323833 PI4K2AQ9BTU6 479 aa16.56■□□□□ 0.24
TSFM-201ENST00000323833 SRRTQ9BXP5 876 aaKnown RBP16.56■□□□□ 0.24
TSFM-201ENST00000323833 SMYD3Q9H7B4 428 aa16.56■□□□□ 0.24
TSFM-201ENST00000323833 VRTNQ9H8Y1 702 aa16.56■□□□□ 0.24
TSFM-201ENST00000323833 TMEM8AQ9HCN3 771 aa16.56■□□□□ 0.24
TSFM-201ENST00000323833 WDR6Q9NNW5 1121 aaKnown RBP16.56■□□□□ 0.24
TSFM-201ENST00000323833 ARMCX3Q9UH62 379 aaPredicted RBP16.56■□□□□ 0.24
TSFM-201ENST00000323833 RWDD2AQ9UIY3 292 aa16.56■□□□□ 0.24
TSFM-201ENST00000323833 MAFFQ9ULX9 164 aa16.56■□□□□ 0.24
TSFM-201ENST00000323833 YIPF1Q9Y548 306 aa16.56■□□□□ 0.24
TSFM-201ENST00000323833 NME7Q9Y5B8 376 aa16.56■□□□□ 0.24
TSFM-201ENST00000323833 ZNF638Q14966 1978 aaKnown RBP16.56■□□□□ 0.24
TSFM-201ENST00000323833 OBSL1O75147 1896 aa16.56■□□□□ 0.24
TSFM-201ENST00000323833 C2CD4DB7Z1M9 353 aa16.55■□□□□ 0.24
TSFM-201ENST00000323833 TNFRSF10AO00220 468 aa16.55■□□□□ 0.24
TSFM-201ENST00000323833 ATP2C2O75185 946 aa16.55■□□□□ 0.24
TSFM-201ENST00000323833 SOAT2O75908 522 aa16.55■□□□□ 0.24
TSFM-201ENST00000323833 MBD3O95983 291 aa16.55■□□□□ 0.24
TSFM-201ENST00000323833 PDGFRBP09619 1106 aa16.55■□□□□ 0.24
TSFM-201ENST00000323833 GTF2H1P32780 548 aa16.55■□□□□ 0.24
TSFM-201ENST00000323833 RAP1GAPP47736 663 aa16.55■□□□□ 0.24
TSFM-201ENST00000323833 CDH8P55286 799 aa16.55■□□□□ 0.24
TSFM-201ENST00000323833 DPCR1Q3MIW9 517 aa16.55■□□□□ 0.24
TSFM-201ENST00000323833 INTS6LQ5JSJ4 861 aaKnown RBP16.55■□□□□ 0.24
TSFM-201ENST00000323833 KRT39Q6A163 491 aa16.55■□□□□ 0.24
TSFM-201ENST00000323833 FRMD5Q7Z6J6 570 aa16.55■□□□□ 0.24
TSFM-201ENST00000323833 SDCBP2Q9H190 292 aa16.55■□□□□ 0.24
TSFM-201ENST00000323833 SNX25Q9H3E2 840 aa16.55■□□□□ 0.24
TSFM-201ENST00000323833 ABI2Q9NYB9 513 aaPredicted RBP16.55■□□□□ 0.24
TSFM-201ENST00000323833 DNMT3BQ9UBC3 853 aaKnown RBP16.55■□□□□ 0.24
TSFM-201ENST00000323833 GTF3C4Q9UKN8 822 aa16.55■□□□□ 0.24
TSFM-201ENST00000323833 MYBPHLA2RUH7 354 aa16.54■□□□□ 0.24
TSFM-201ENST00000323833 STX10O60499 249 aa16.54■□□□□ 0.24
TSFM-201ENST00000323833 N4BP1O75113 896 aaKnown RBP16.54■□□□□ 0.24
TSFM-201ENST00000323833 TACC1O75410 805 aa16.54■□□□□ 0.24
TSFM-201ENST00000323833 ASS1P00966 412 aaKnown RBP16.54■□□□□ 0.24
TSFM-201ENST00000323833 POU2F2P09086 479 aa16.54■□□□□ 0.24
TSFM-201ENST00000323833 PCSK1P29120 753 aa16.54■□□□□ 0.24
TSFM-201ENST00000323833 GNL1P36915 607 aaPredicted RBP16.54■□□□□ 0.24
TSFM-201ENST00000323833 MXI1P50539 228 aa16.54■□□□□ 0.24
TSFM-201ENST00000323833 PSMC1P62191 440 aaKnown RBP16.54■□□□□ 0.24
TSFM-201ENST00000323833 CBWD6Q4V339 395 aa16.54■□□□□ 0.24
TSFM-201ENST00000323833 CBWD3Q5JTY5 395 aa16.54■□□□□ 0.24
TSFM-201ENST00000323833 CBWD5Q5RIA9 395 aa16.54■□□□□ 0.24
TSFM-201ENST00000323833 OR6B3Q8NGW1 331 aa16.54■□□□□ 0.24
TSFM-201ENST00000323833 TAF4BQ92750 862 aa16.54■□□□□ 0.24
TSFM-201ENST00000323833 SEMA4DQ92854 862 aa16.54■□□□□ 0.24
TSFM-201ENST00000323833 KHSRPQ92945 711 aaKnown RBP eCLIP16.54■□□□□ 0.249e-10■■■■■ 30.6
TSFM-201ENST00000323833 SLC35C1Q96A29 364 aa16.54■□□□□ 0.24
TSFM-201ENST00000323833 PKMYT1Q99640 499 aa16.54■□□□□ 0.24
TSFM-201ENST00000323833 SEPT5Q99719 369 aaPredicted RBP16.54■□□□□ 0.24
TSFM-201ENST00000323833 LPIN3Q9BQK8 851 aa16.54■□□□□ 0.24
TSFM-201ENST00000323833 SYT15Q9BQS2 421 aa16.54■□□□□ 0.24
TSFM-201ENST00000323833 APOBEC3GQ9HC16 384 aaKnown RBP16.54■□□□□ 0.24
TSFM-201ENST00000323833 METTL14Q9HCE5 456 aaKnown RBP16.54■□□□□ 0.24
TSFM-201ENST00000323833 CEP72Q9P209 647 aa16.54■□□□□ 0.24
TSFM-201ENST00000323833 NR2E1Q9Y466 385 aa16.54■□□□□ 0.24
TSFM-201ENST00000323833 BDP1A6H8Y1 2624 aa16.54■□□□□ 0.24
TSFM-201ENST00000323833 PTPN2P17706 415 aa16.53■□□□□ 0.24
TSFM-201ENST00000323833 MGAT5BQ3V5L5 792 aa16.53■□□□□ 0.24
TSFM-201ENST00000323833 RBM43Q6ZSC3 357 aaKnown RBP16.53■□□□□ 0.24
TSFM-201ENST00000323833 GET4Q7L5D6 327 aaPredicted RBP16.53■□□□□ 0.24
TSFM-201ENST00000323833 TDRD5Q8NAT2 981 aaKnown RBP16.53■□□□□ 0.24
TSFM-201ENST00000323833 FBXL13Q8NEE6 735 aa16.53■□□□□ 0.24
TSFM-201ENST00000323833 SPPL2BQ8TCT7 592 aa16.53■□□□□ 0.24
TSFM-201ENST00000323833 C2orf15Q8WU43 125 aaKnown RBP16.53■□□□□ 0.24
TSFM-201ENST00000323833 CORO1BQ9BR76 489 aa16.53■□□□□ 0.24
TSFM-201ENST00000323833 IMPG2Q9BZV3 1241 aa16.53■□□□□ 0.24
TSFM-201ENST00000323833 DPEP3Q9H4B8 488 aa16.53■□□□□ 0.24
TSFM-201ENST00000323833 CRTAC1Q9NQ79 661 aa16.53■□□□□ 0.24
Retrieved 100 of 20,778 RNA–protein pairs in 31.9 ms