RNA–Protein interactions for RNA: ENST00000322213.8

SMC1A-201, Transcript of structural maintenance of chromosomes 1A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMC1A, Length 9,784 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC1A-201ENST00000322213 TYK2P29597 1187 aa7.36□□□□□ -1.23
SMC1A-201ENST00000322213 RAB15P59190 212 aa7.36□□□□□ -1.23
SMC1A-201ENST00000322213 PIGHQ14442 188 aaPredicted RBP7.36□□□□□ -1.23
SMC1A-201ENST00000322213 PPIL6Q8IXY8 311 aa7.36□□□□□ -1.23
SMC1A-201ENST00000322213 S100ZQ8WXG8 99 aa7.36□□□□□ -1.23
SMC1A-201ENST00000322213 ECSITQ9BQ95 431 aa7.36□□□□□ -1.23
SMC1A-201ENST00000322213 APOL6Q9BWW8 343 aa7.36□□□□□ -1.23
SMC1A-201ENST00000322213 NACA2Q9H009 215 aa7.36□□□□□ -1.23
SMC1A-201ENST00000322213 METTL5Q9NRN9 209 aaKnown RBP7.36□□□□□ -1.23
SMC1A-201ENST00000322213 HESX1Q9UBX0 185 aa7.36□□□□□ -1.23
SMC1A-201ENST00000322213 AK5Q9Y6K8 562 aa7.36□□□□□ -1.23
SMC1A-201ENST00000322213 RICTORQ6R327 1708 aa7.36□□□□□ -1.23
SMC1A-201ENST00000322213 SALL1Q9NSC2 1324 aa7.36□□□□□ -1.23
SMC1A-201ENST00000322213 CRYBG1Q9Y4K1 1723 aa7.36□□□□□ -1.23
SMC1A-201ENST00000322213 PIK3CDO00329 1044 aa7.36□□□□□ -1.23
SMC1A-201ENST00000322213 PDXKO00764 312 aa7.36□□□□□ -1.23
SMC1A-201ENST00000322213 MGRN1O60291 552 aa7.36□□□□□ -1.23
SMC1A-201ENST00000322213 SNRPAP09012 282 aaKnown RBP7.36□□□□□ -1.23
SMC1A-201ENST00000322213 KLRC1P26715 233 aa7.36□□□□□ -1.23
SMC1A-201ENST00000322213 TCIRG1Q13488 830 aa7.36□□□□□ -1.23
SMC1A-201ENST00000322213 SLC12A1Q13621 1099 aa7.36□□□□□ -1.23
SMC1A-201ENST00000322213 PDIA5Q14554 519 aa7.36□□□□□ -1.23
SMC1A-201ENST00000322213 KLHL12Q53G59 568 aa7.36□□□□□ -1.23
SMC1A-201ENST00000322213 LRRC47Q8N1G4 583 aaKnown RBP7.36□□□□□ -1.23
SMC1A-201ENST00000322213 SEPT8Q92599 483 aa7.36□□□□□ -1.23
SMC1A-201ENST00000322213 FBXO9Q9UK97 447 aaPredicted RBP7.36□□□□□ -1.23
SMC1A-201ENST00000322213 BCORQ6W2J9 1755 aa7.36□□□□□ -1.23
SMC1A-201ENST00000322213 H0YC42 278 aa7.36□□□□□ -1.23
SMC1A-201ENST00000322213 APOL1O14791 398 aa7.36□□□□□ -1.23
SMC1A-201ENST00000322213 CPA2P48052 419 aa7.36□□□□□ -1.23
SMC1A-201ENST00000322213 SGSM1Q2NKQ1 1148 aa7.36□□□□□ -1.23
SMC1A-201ENST00000322213 XKR9Q5GH70 373 aa7.36□□□□□ -1.23
SMC1A-201ENST00000322213 KRT27Q7Z3Y8 459 aa7.36□□□□□ -1.23
SMC1A-201ENST00000322213 XXYLT1Q8NBI6 393 aa7.36□□□□□ -1.23
SMC1A-201ENST00000322213 NAT14Q8WUY8 206 aa7.36□□□□□ -1.23
SMC1A-201ENST00000322213 ZSWIM1Q9BR11 485 aa7.36□□□□□ -1.23
SMC1A-201ENST00000322213 EHD4Q9H223 541 aa7.36□□□□□ -1.23
SMC1A-201ENST00000322213 SLC38A10Q9HBR0 1119 aa7.36□□□□□ -1.23
SMC1A-201ENST00000322213 KMT5AQ9NQR1 393 aa7.36□□□□□ -1.23
SMC1A-201ENST00000322213 NAGPAQ9UK23 515 aa7.36□□□□□ -1.23
SMC1A-201ENST00000322213 C1orf232A0A0U1RR37 186 aa7.36□□□□□ -1.23
SMC1A-201ENST00000322213 CCDC78A2IDD5 438 aa7.36□□□□□ -1.23
SMC1A-201ENST00000322213 TRPC5OSA6NMA1 111 aa7.36□□□□□ -1.23
SMC1A-201ENST00000322213 USP1O94782 785 aa7.36□□□□□ -1.23
SMC1A-201ENST00000322213 APRTP07741 180 aa7.36□□□□□ -1.23
SMC1A-201ENST00000322213 NPR1P16066 1061 aa7.36□□□□□ -1.23
SMC1A-201ENST00000322213 ACAT1P24752 427 aaKnown RBP7.36□□□□□ -1.23
SMC1A-201ENST00000322213 FCHO2Q0JRZ9 810 aa7.36□□□□□ -1.23
SMC1A-201ENST00000322213 CSTF3Q12996 717 aaKnown RBP7.36□□□□□ -1.23
SMC1A-201ENST00000322213 C12orf60Q5U649 245 aa7.36□□□□□ -1.23
SMC1A-201ENST00000322213 TUBA3EQ6PEY2 450 aa7.36□□□□□ -1.23
SMC1A-201ENST00000322213 ANKMY2Q8IV38 441 aa7.36□□□□□ -1.23
SMC1A-201ENST00000322213 STRBPQ96SI9 672 aaKnown RBP7.36□□□□□ -1.23
SMC1A-201ENST00000322213 AMNQ9BXJ7 453 aa7.36□□□□□ -1.23
SMC1A-201ENST00000322213 UBXN6Q9BZV1 441 aa7.36□□□□□ -1.23
SMC1A-201ENST00000322213 EBF2Q9HAK2 575 aa7.36□□□□□ -1.23
SMC1A-201ENST00000322213 ASNSD1Q9NWL6 643 aa7.36□□□□□ -1.23
SMC1A-201ENST00000322213 SELENONQ9NZV5 590 aa7.36□□□□□ -1.23
SMC1A-201ENST00000322213 SLC24A2Q9UI40 661 aa7.36□□□□□ -1.23
SMC1A-201ENST00000322213 HNRNPCL2B2RXH8 293 aa7.35□□□□□ -1.23
SMC1A-201ENST00000322213 PDLIM1O00151 329 aa7.35□□□□□ -1.23
SMC1A-201ENST00000322213 ALOX5P09917 674 aa7.35□□□□□ -1.23
SMC1A-201ENST00000322213 PTPAQ15257 358 aa7.35□□□□□ -1.23
SMC1A-201ENST00000322213 TMTC4Q5T4D3 741 aa7.35□□□□□ -1.23
SMC1A-201ENST00000322213 TTC27Q6P3X3 843 aa7.35□□□□□ -1.23
SMC1A-201ENST00000322213 KYQ8NBH2 561 aa7.35□□□□□ -1.23
SMC1A-201ENST00000322213 RABL2AQ9UBK7 228 aaPredicted RBP7.35□□□□□ -1.23
SMC1A-201ENST00000322213 DIP2BQ9P265 1576 aa7.35□□□□□ -1.23
SMC1A-201ENST00000322213 TRIM24O15164 1050 aa7.35□□□□□ -1.23
SMC1A-201ENST00000322213 MEA1Q16626 185 aa7.35□□□□□ -1.23
SMC1A-201ENST00000322213 DHDDSQ86SQ9 333 aa7.35□□□□□ -1.23
SMC1A-201ENST00000322213 DEPDC7Q96QD5 511 aa7.35□□□□□ -1.23
SMC1A-201ENST00000322213 LACRTQ9GZZ8 138 aa7.35□□□□□ -1.23
SMC1A-201ENST00000322213 PAIP1Q9H074 479 aaKnown RBP7.35□□□□□ -1.23
SMC1A-201ENST00000322213 GPHNQ9NQX3 736 aaPredicted RBP7.35□□□□□ -1.23
SMC1A-201ENST00000322213 DCDC2Q9UHG0 476 aa7.35□□□□□ -1.23
SMC1A-201ENST00000322213 RWDD3Q9Y3V2 267 aa7.35□□□□□ -1.23
SMC1A-201ENST00000322213 ACTL7BQ9Y614 415 aa7.35□□□□□ -1.23
SMC1A-201ENST00000322213 OPLAHO14841 1288 aa7.35□□□□□ -1.23
SMC1A-201ENST00000322213 ZNF746Q6NUN9 644 aaPredicted RBP7.35□□□□□ -1.23
SMC1A-201ENST00000322213 ZBTB8BQ8NAP8 495 aaPredicted RBP7.35□□□□□ -1.23
SMC1A-201ENST00000322213 FRMD8P1Q9BZ68 369 aaPredicted RBP7.35□□□□□ -1.23
SMC1A-201ENST00000322213 MRPL11Q9Y3B7 192 aaKnown RBP7.35□□□□□ -1.23
SMC1A-201ENST00000322213 LAMB2P55268 1798 aa7.35□□□□□ -1.23
SMC1A-201ENST00000322213 MMP13P45452 471 aa7.35□□□□□ -1.23
SMC1A-201ENST00000322213 KCNQ4P56696 695 aa7.35□□□□□ -1.23
SMC1A-201ENST00000322213 DMC1Q14565 340 aa7.35□□□□□ -1.23
SMC1A-201ENST00000322213 PDK3Q15120 406 aa7.35□□□□□ -1.23
SMC1A-201ENST00000322213 CCDC85BQ15834 202 aaPredicted RBP7.35□□□□□ -1.23
SMC1A-201ENST00000322213 TFDP3Q5H9I0 405 aa7.35□□□□□ -1.23
SMC1A-201ENST00000322213 RBM44Q6ZP01 1051 aaKnown RBP7.35□□□□□ -1.23
SMC1A-201ENST00000322213 ACSBG1Q96GR2 724 aa7.35□□□□□ -1.23
SMC1A-201ENST00000322213 TBC1D10AQ9BXI6 508 aa7.35□□□□□ -1.23
SMC1A-201ENST00000322213 FSD1LQ9BXM9 530 aa7.35□□□□□ -1.23
SMC1A-201ENST00000322213 SCN3BQ9NY72 215 aa7.35□□□□□ -1.23
SMC1A-201ENST00000322213 PTTG2Q9NZH5 202 aa7.35□□□□□ -1.23
SMC1A-201ENST00000322213 KCND2Q9NZV8 630 aa7.35□□□□□ -1.23
SMC1A-201ENST00000322213 PNMA8CA0A1B0GUJ8 204 aa7.35□□□□□ -1.23
SMC1A-201ENST00000322213 PDZK1P1A8MUH7 402 aa7.35□□□□□ -1.23
SMC1A-201ENST00000322213 MATN2O00339 956 aa7.35□□□□□ -1.23
Retrieved 100 of 20,778 RNA–protein pairs in 19.9 ms