RNA–Protein interactions for RNA: ENST00000320755.11

COL9A1-201, Transcript of collagen type IX alpha 1 chain, humanhuman

TSL 1 (best) BASIC

Gene COL9A1, Length 3,059 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL9A1-201ENST00000320755 STAT4Q14765 748 aa18.38■□□□□ 0.53
COL9A1-201ENST00000320755 ZNF699Q32M78 642 aa18.38■□□□□ 0.53
COL9A1-201ENST00000320755 SPATA21Q7Z572 469 aa18.38■□□□□ 0.53
COL9A1-201ENST00000320755 ZCCHC9Q8N567 271 aaKnown RBP18.38■□□□□ 0.53
COL9A1-201ENST00000320755 C12orf42Q96LP6 360 aa18.38■□□□□ 0.53
COL9A1-201ENST00000320755 INO80BQ9C086 356 aaPredicted RBP18.38■□□□□ 0.53
COL9A1-201ENST00000320755 EPB41L3Q9Y2J2 1087 aaPredicted RBP18.38■□□□□ 0.53
COL9A1-201ENST00000320755 MSCO60682 206 aa18.37■□□□□ 0.53
COL9A1-201ENST00000320755 TOM1L1O75674 476 aa18.37■□□□□ 0.53
COL9A1-201ENST00000320755 PRKCBP05771 671 aa18.37■□□□□ 0.53
COL9A1-201ENST00000320755 PGK2P07205 417 aa18.37■□□□□ 0.53
COL9A1-201ENST00000320755 ELF3P78545 371 aaPredicted RBP18.37■□□□□ 0.53
COL9A1-201ENST00000320755 ENPEPQ07075 957 aa18.37■□□□□ 0.53
COL9A1-201ENST00000320755 LAMTOR4Q0VGL1 99 aa18.37■□□□□ 0.53
COL9A1-201ENST00000320755 SYCP2LQ5T4T6 812 aa18.37■□□□□ 0.53
COL9A1-201ENST00000320755 ARHGEF18Q6ZSZ5 1173 aa18.37■□□□□ 0.53
COL9A1-201ENST00000320755 FAM228AQ86W67 206 aa18.37■□□□□ 0.53
COL9A1-201ENST00000320755 SPOCK2Q92563 424 aa18.37■□□□□ 0.53
COL9A1-201ENST00000320755 NIF3L1Q9GZT8 377 aa18.37■□□□□ 0.53
COL9A1-201ENST00000320755 SYNCQ9H7C4 482 aa18.37■□□□□ 0.53
COL9A1-201ENST00000320755 DNALI1O14645 258 aaPredicted RBP18.37■□□□□ 0.53
COL9A1-201ENST00000320755 B4GALT5O43286 388 aa18.37■□□□□ 0.53
COL9A1-201ENST00000320755 PSMA2P25787 234 aa18.37■□□□□ 0.53
COL9A1-201ENST00000320755 PDIA2Q13087 525 aaKnown RBP18.37■□□□□ 0.53
COL9A1-201ENST00000320755 DENND1BQ6P3S1 775 aa18.37■□□□□ 0.53
COL9A1-201ENST00000320755 CFAP57Q96MR6 1250 aa18.37■□□□□ 0.53
COL9A1-201ENST00000320755 CNTN6Q9UQ52 1028 aa18.37■□□□□ 0.53
COL9A1-201ENST00000320755 PHIPQ8WWQ0 1821 aa18.37■□□□□ 0.53
COL9A1-201ENST00000320755 ATP2A1O14983 1001 aa18.36■□□□□ 0.53
COL9A1-201ENST00000320755 DNAJC8O75937 253 aaPredicted RBP18.36■□□□□ 0.53
COL9A1-201ENST00000320755 FOXN2P32314 431 aa18.36■□□□□ 0.53
COL9A1-201ENST00000320755 KCNJ2P63252 427 aa18.36■□□□□ 0.53
COL9A1-201ENST00000320755 LMNB2Q03252 620 aa18.36■□□□□ 0.53
COL9A1-201ENST00000320755 PKN2Q16513 984 aaKnown RBP18.36■□□□□ 0.53
COL9A1-201ENST00000320755 MAPK6Q16659 721 aa18.36■□□□□ 0.53
COL9A1-201ENST00000320755 WDR72Q3MJ13 1102 aa18.36■□□□□ 0.53
COL9A1-201ENST00000320755 WDR78Q5VTH9 848 aa18.36■□□□□ 0.53
COL9A1-201ENST00000320755 TMEM134Q9H6X4 195 aa18.36■□□□□ 0.53
COL9A1-201ENST00000320755 ECT2Q9H8V3 914 aa18.36■□□□□ 0.53
COL9A1-201ENST00000320755 SOWAHBA6NEL2 793 aa18.36■□□□□ 0.53
COL9A1-201ENST00000320755 PIK3R2O00459 728 aa18.36■□□□□ 0.53
COL9A1-201ENST00000320755 ZNF132P52740 706 aa18.36■□□□□ 0.53
COL9A1-201ENST00000320755 HSDL1Q3SXM5 330 aa18.36■□□□□ 0.53
COL9A1-201ENST00000320755 EAPPQ56P03 285 aaPredicted RBP18.36■□□□□ 0.53
COL9A1-201ENST00000320755 TFDP3Q5H9I0 405 aa18.36■□□□□ 0.53
COL9A1-201ENST00000320755 FAM160B1Q5W0V3 765 aa18.36■□□□□ 0.53
COL9A1-201ENST00000320755 POTEAQ6S8J7 498 aa18.36■□□□□ 0.53
COL9A1-201ENST00000320755 WDR49Q8IV35 697 aa18.36■□□□□ 0.53
COL9A1-201ENST00000320755 ALLCQ8N6M5 410 aa18.36■□□□□ 0.53
COL9A1-201ENST00000320755 JOSD2Q8TAC2 188 aa18.36■□□□□ 0.53
COL9A1-201ENST00000320755 SEPT1Q8WYJ6 367 aa18.36■□□□□ 0.53
COL9A1-201ENST00000320755 ACO2Q99798 780 aaKnown RBP18.36■□□□□ 0.53
COL9A1-201ENST00000320755 SLC12A4Q9UP95 1085 aa18.36■□□□□ 0.53
COL9A1-201ENST00000320755 TRIM33Q9UPN9 1127 aa18.36■□□□□ 0.53
COL9A1-201ENST00000320755 CEP83Q9Y592 693 aa18.36■□□□□ 0.53
COL9A1-201ENST00000320755 TNS1Q9HBL0 1735 aaKnown RBP18.36■□□□□ 0.53
COL9A1-201ENST00000320755 NOP56O00567 594 aaKnown RBP18.36■□□□□ 0.53
COL9A1-201ENST00000320755 RFC5P40937 340 aa18.36■□□□□ 0.53
COL9A1-201ENST00000320755 TARBP2Q15633 366 aaKnown RBP18.36■□□□□ 0.53
COL9A1-201ENST00000320755 SGSM1Q2NKQ1 1148 aa18.36■□□□□ 0.53
COL9A1-201ENST00000320755 GADL1Q6ZQY3 521 aa18.36■□□□□ 0.53
COL9A1-201ENST00000320755 TMEM192Q8IY95 271 aa18.36■□□□□ 0.53
COL9A1-201ENST00000320755 DNERQ8NFT8 737 aa18.36■□□□□ 0.53
COL9A1-201ENST00000320755 RMDN2Q96LZ7 410 aa18.36■□□□□ 0.53
COL9A1-201ENST00000320755 PITPNM3Q9BZ71 974 aa18.36■□□□□ 0.53
COL9A1-201ENST00000320755 STK38LQ9Y2H1 464 aa18.36■□□□□ 0.53
COL9A1-201ENST00000320755 hCG_1818297A0A087WSY0 165 aa18.35■□□□□ 0.53
COL9A1-201ENST00000320755 OGTO15294 1046 aa18.35■□□□□ 0.53
COL9A1-201ENST00000320755 MAFO75444 373 aaPredicted RBP18.35■□□□□ 0.53
COL9A1-201ENST00000320755 ICAM3P32942 547 aa18.35■□□□□ 0.53
COL9A1-201ENST00000320755 WDR4P57081 412 aaKnown RBP18.35■□□□□ 0.53
COL9A1-201ENST00000320755 DNAJC3Q13217 504 aa18.35■□□□□ 0.53
COL9A1-201ENST00000320755 RLFQ13129 1914 aa18.35■□□□□ 0.53
COL9A1-201ENST00000320755 KRT3P12035 628 aa18.35■□□□□ 0.53
COL9A1-201ENST00000320755 NRLP54845 237 aa18.35■□□□□ 0.53
COL9A1-201ENST00000320755 SWT1Q5T5J6 900 aaKnown RBP18.35■□□□□ 0.53
COL9A1-201ENST00000320755 GPATCH11Q8N954 259 aa18.35■□□□□ 0.53
COL9A1-201ENST00000320755 CHST13Q8NET6 341 aa18.35■□□□□ 0.53
COL9A1-201ENST00000320755 ACTL9Q8TC94 416 aa18.35■□□□□ 0.53
COL9A1-201ENST00000320755 TRABDQ9H4I3 376 aa18.35■□□□□ 0.53
COL9A1-201ENST00000320755 FAM47DPA6NHR8 397 aa18.34■□□□□ 0.53
COL9A1-201ENST00000320755 CST8O60676 142 aa18.34■□□□□ 0.53
COL9A1-201ENST00000320755 ARIH2O95376 493 aa18.34■□□□□ 0.53
COL9A1-201ENST00000320755 CDKN2BP42772 138 aa18.34■□□□□ 0.53
COL9A1-201ENST00000320755 VCPP55072 806 aaKnown RBP18.34■□□□□ 0.53
COL9A1-201ENST00000320755 GDF10P55107 478 aa18.34■□□□□ 0.53
COL9A1-201ENST00000320755 PSMC1P62191 440 aaKnown RBP18.34■□□□□ 0.53
COL9A1-201ENST00000320755 IGBP1P78318 339 aa18.34■□□□□ 0.53
COL9A1-201ENST00000320755 PTPN20Q4JDL3 420 aa18.34■□□□□ 0.53
COL9A1-201ENST00000320755 EEF1DP3Q658K8 133 aa18.34■□□□□ 0.53
COL9A1-201ENST00000320755 ZPBP2Q6X784 338 aa18.34■□□□□ 0.53
COL9A1-201ENST00000320755 ZBTB8OSQ8IWT0 167 aa18.34■□□□□ 0.53
COL9A1-201ENST00000320755 FITM2Q8N6M3 262 aa18.34■□□□□ 0.53
COL9A1-201ENST00000320755 MAML1Q92585 1016 aa18.34■□□□□ 0.53
COL9A1-201ENST00000320755 ARL2BPQ9Y2Y0 163 aa18.34■□□□□ 0.53
COL9A1-201ENST00000320755 IGKV6D-21A0A0A0MT36 114 aa18.34■□□□□ 0.53
COL9A1-201ENST00000320755 CD48P09326 243 aa18.34■□□□□ 0.53
COL9A1-201ENST00000320755 IL1R2P27930 398 aa18.34■□□□□ 0.53
COL9A1-201ENST00000320755 OTUD4Q01804 1114 aaKnown RBP18.34■□□□□ 0.53
COL9A1-201ENST00000320755 SLCO1B3Q9NPD5 702 aa18.34■□□□□ 0.53
Retrieved 100 of 20,778 RNA–protein pairs in 42.5 ms