RNA–Protein interactions for RNA: ENST00000320578.2

RAB39A-201, Transcript of RAB39A, member RAS oncogene family, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RAB39A, Length 1,830 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB39A-201ENST00000320578 C3orf20Q8ND61 904 aa18.92■□□□□ 0.62
RAB39A-201ENST00000320578 ZNF296Q8WUU4 475 aaPredicted RBP18.92■□□□□ 0.62
RAB39A-201ENST00000320578 RNPC3Q96LT9 517 aaKnown RBP18.92■□□□□ 0.62
RAB39A-201ENST00000320578 PLVAPQ9BX97 442 aa18.92■□□□□ 0.62
RAB39A-201ENST00000320578 MIS12Q9H081 205 aa18.92■□□□□ 0.62
RAB39A-201ENST00000320578 HMGXB4Q9UGU5 601 aa18.92■□□□□ 0.62
RAB39A-201ENST00000320578 IP6K2Q9UHH9 426 aa18.92■□□□□ 0.62
RAB39A-201ENST00000320578 SNX9Q9Y5X1 595 aa18.92■□□□□ 0.62
RAB39A-201ENST00000320578 PDCD11Q14690 1871 aaKnown RBP18.91■□□□□ 0.62
RAB39A-201ENST00000320578 TMEM191CA6NGB0 347 aa18.91■□□□□ 0.62
RAB39A-201ENST00000320578 TMEM110-MUSTN1A8MSY1 372 aa18.91■□□□□ 0.62
RAB39A-201ENST00000320578 SKIP12755 728 aa18.91■□□□□ 0.62
RAB39A-201ENST00000320578 TNFRSF8P28908 595 aa18.91■□□□□ 0.62
RAB39A-201ENST00000320578 GABRB2P47870 512 aa18.91■□□□□ 0.62
RAB39A-201ENST00000320578 TAF6P49848 677 aa18.91■□□□□ 0.62
RAB39A-201ENST00000320578 RWDD2BP57060 319 aa18.91■□□□□ 0.62
RAB39A-201ENST00000320578 NFX1Q12986 1120 aaKnown RBP18.91■□□□□ 0.62
RAB39A-201ENST00000320578 SV2CQ496J9 727 aa18.91■□□□□ 0.62
RAB39A-201ENST00000320578 PPP1R15BQ5SWA1 713 aa18.91■□□□□ 0.62
RAB39A-201ENST00000320578 C8orf74Q6P047 294 aa18.91■□□□□ 0.62
RAB39A-201ENST00000320578 GADD45GIP1Q8TAE8 222 aaPredicted RBP18.91■□□□□ 0.62
RAB39A-201ENST00000320578 HEXIM2Q96MH2 286 aaKnown RBP18.91■□□□□ 0.62
RAB39A-201ENST00000320578 LRRC1Q9BTT6 524 aa18.91■□□□□ 0.62
RAB39A-201ENST00000320578 KLK14Q9P0G3 267 aa18.91■□□□□ 0.62
RAB39A-201ENST00000320578 KPNA7A9QM74 516 aa18.9■□□□□ 0.62
RAB39A-201ENST00000320578 PTGESO14684 152 aa18.9■□□□□ 0.62
RAB39A-201ENST00000320578 PPEF2O14830 753 aa18.9■□□□□ 0.62
RAB39A-201ENST00000320578 MICAL2O94851 1124 aa18.9■□□□□ 0.62
RAB39A-201ENST00000320578 CTSHP09668 335 aa18.9■□□□□ 0.62
RAB39A-201ENST00000320578 ZNF268Q14587 947 aaPredicted RBP18.9■□□□□ 0.62
RAB39A-201ENST00000320578 PTPROQ16827 1216 aa18.9■□□□□ 0.62
RAB39A-201ENST00000320578 KRT35Q92764 455 aa18.9■□□□□ 0.62
RAB39A-201ENST00000320578 BTBD6Q96KE9 485 aa18.9■□□□□ 0.62
RAB39A-201ENST00000320578 SLITRK6Q9H5Y7 841 aa18.9■□□□□ 0.62
RAB39A-201ENST00000320578 AGO3Q9H9G7 860 aaKnown RBP18.9■□□□□ 0.62
RAB39A-201ENST00000320578 PADI3Q9ULW8 664 aa18.9■□□□□ 0.62
RAB39A-201ENST00000320578 NOD1Q9Y239 953 aa18.9■□□□□ 0.62
RAB39A-201ENST00000320578 KRIT1O00522 736 aa18.9■□□□□ 0.62
RAB39A-201ENST00000320578 PSTPIP1O43586 416 aa18.9■□□□□ 0.62
RAB39A-201ENST00000320578 MYCNP04198 464 aaPredicted RBP18.9■□□□□ 0.62
RAB39A-201ENST00000320578 SETSIPP0DME0 302 aa18.9■□□□□ 0.62
RAB39A-201ENST00000320578 GPD2P43304 727 aa18.9■□□□□ 0.62
RAB39A-201ENST00000320578 PAK2Q13177 524 aa18.9■□□□□ 0.62
RAB39A-201ENST00000320578 SOWAHAQ2M3V2 549 aa18.9■□□□□ 0.62
RAB39A-201ENST00000320578 MAP9Q49MG5 647 aa18.9■□□□□ 0.62
RAB39A-201ENST00000320578 SEL1L2Q5TEA6 688 aa18.9■□□□□ 0.62
RAB39A-201ENST00000320578 ARHGAP17Q68EM7 881 aa18.9■□□□□ 0.62
RAB39A-201ENST00000320578 DNAJC24Q6P3W2 148 aa18.9■□□□□ 0.62
RAB39A-201ENST00000320578 CRYBG2Q8N1P7 616 aa18.9■□□□□ 0.62
RAB39A-201ENST00000320578 TOP6BLQ8N6T0 577 aa18.9■□□□□ 0.62
RAB39A-201ENST00000320578 MRPL45Q9BRJ2 306 aaKnown RBP18.9■□□□□ 0.62
RAB39A-201ENST00000320578 UBN1Q9NPG3 1134 aa18.9■□□□□ 0.62
RAB39A-201ENST00000320578 ZNF446Q9NWS9 450 aa18.9■□□□□ 0.62
RAB39A-201ENST00000320578 STIM2Q9P246 746 aa18.9■□□□□ 0.62
RAB39A-201ENST00000320578 SBDSQ9Y3A5 250 aaKnown RBP eCLIP18.9■□□□□ 0.62
RAB39A-201ENST00000320578 FAM170AA1A519 330 aa18.89■□□□□ 0.61
RAB39A-201ENST00000320578 FGGP02679 453 aa18.89■□□□□ 0.61
RAB39A-201ENST00000320578 PAX3P23760 479 aa18.89■□□□□ 0.61
RAB39A-201ENST00000320578 SSTR3P32745 418 aaPredicted RBP18.89■□□□□ 0.61
RAB39A-201ENST00000320578 SOX4Q06945 474 aaPredicted RBP18.89■□□□□ 0.61
RAB39A-201ENST00000320578 LPIN1Q14693 890 aa18.89■□□□□ 0.61
RAB39A-201ENST00000320578 PTPN20Q4JDL3 420 aa18.89■□□□□ 0.61
RAB39A-201ENST00000320578 BEND6Q5SZJ8 279 aaPredicted RBP18.89■□□□□ 0.61
RAB39A-201ENST00000320578 NIPA2Q8N8Q9 360 aa18.89■□□□□ 0.61
RAB39A-201ENST00000320578 FNIP1Q8TF40 1166 aa18.89■□□□□ 0.61
RAB39A-201ENST00000320578 C18orf8Q96DM3 657 aa18.89■□□□□ 0.61
RAB39A-201ENST00000320578 PHF24Q9UPV7 400 aa18.89■□□□□ 0.61
RAB39A-201ENST00000320578 A0A0U1RQF3 1178 aa18.88■□□□□ 0.61
RAB39A-201ENST00000320578 A0A0U1RQG5 324 aaPredicted RBP18.88■□□□□ 0.61
RAB39A-201ENST00000320578 SIGLEC16A6NMB1 481 aa18.88■□□□□ 0.61
RAB39A-201ENST00000320578 PIGHQ14442 188 aaPredicted RBP18.88■□□□□ 0.61
RAB39A-201ENST00000320578 LONRF2Q1L5Z9 754 aa18.88■□□□□ 0.61
RAB39A-201ENST00000320578 LRRC38Q5VT99 294 aa18.88■□□□□ 0.61
RAB39A-201ENST00000320578 CCNI2Q6ZMN8 369 aaPredicted RBP18.88■□□□□ 0.61
RAB39A-201ENST00000320578 EIF1ADQ8N9N8 165 aaKnown RBP18.88■□□□□ 0.61
RAB39A-201ENST00000320578 GSTCDQ8NEC7 633 aa18.88■□□□□ 0.61
RAB39A-201ENST00000320578 TRMT13Q9NUP7 481 aaKnown RBP18.88■□□□□ 0.61
RAB39A-201ENST00000320578 GOLGA6L10A0A0M3HER8 536 aa18.88■□□□□ 0.61
RAB39A-201ENST00000320578 CD52P31358 61 aa18.88■□□□□ 0.61
RAB39A-201ENST00000320578 LILRA4P59901 499 aa18.88■□□□□ 0.61
RAB39A-201ENST00000320578 RNASE9P60153 205 aaKnown RBP18.88■□□□□ 0.61
RAB39A-201ENST00000320578 PKDCCQ504Y2 493 aa18.88■□□□□ 0.61
RAB39A-201ENST00000320578 C2CD6Q53TS8 623 aa18.88■□□□□ 0.61
RAB39A-201ENST00000320578 RHOT1Q8IXI2 618 aa18.88■□□□□ 0.61
RAB39A-201ENST00000320578 STK32AQ8WU08 396 aa18.88■□□□□ 0.61
RAB39A-201ENST00000320578 PGBD4Q96DM1 585 aa18.88■□□□□ 0.61
RAB39A-201ENST00000320578 KRT12Q99456 494 aa18.88■□□□□ 0.61
RAB39A-201ENST00000320578 TRIM7Q9C029 511 aa18.88■□□□□ 0.61
RAB39A-201ENST00000320578 SLTMQ9NWH9 1034 aaKnown RBP eCLIP18.88■□□□□ 0.61
RAB39A-201ENST00000320578 CYTH4Q9UIA0 394 aa18.88■□□□□ 0.61
RAB39A-201ENST00000320578 TRIP11Q15643 1979 aa18.88■□□□□ 0.61
RAB39A-201ENST00000320578 A0A1W2PQ45 241 aaPredicted RBP18.87■□□□□ 0.61
RAB39A-201ENST00000320578 A0A1W2PQY0 241 aa18.87■□□□□ 0.61
RAB39A-201ENST00000320578 M0QYV0 167 aa18.87■□□□□ 0.61
RAB39A-201ENST00000320578 THP07101 528 aa18.87■□□□□ 0.61
RAB39A-201ENST00000320578 GHRP10912 638 aa18.87■□□□□ 0.61
RAB39A-201ENST00000320578 WARSP23381 471 aaKnown RBP18.87■□□□□ 0.61
RAB39A-201ENST00000320578 RPL9P32969 192 aaKnown RBP18.87■□□□□ 0.61
RAB39A-201ENST00000320578 MARCKSL1P49006 195 aa18.87■□□□□ 0.61
RAB39A-201ENST00000320578 LLGL2Q6P1M3 1020 aa18.87■□□□□ 0.61
Retrieved 100 of 20,778 RNA–protein pairs in 195.4 ms