RNA–Protein interactions for RNA: ENST00000320081.9

CLIP4-201, Transcript of CAP-Gly domain containing linker protein family member 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CLIP4, Length 4,293 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLIP4-201ENST00000320081 L3MBTL1Q9Y468 752 aa17.27■□□□□ 0.36
CLIP4-201ENST00000320081 ASTN1O14525 1302 aa17.27■□□□□ 0.36
CLIP4-201ENST00000320081 A0A087WZ62 844 aa17.27■□□□□ 0.35
CLIP4-201ENST00000320081 F8VP50 259 aa17.27■□□□□ 0.35
CLIP4-201ENST00000320081 H3BRJ5 948 aa17.27■□□□□ 0.35
CLIP4-201ENST00000320081 SULT1E1P49888 294 aa17.27■□□□□ 0.35
CLIP4-201ENST00000320081 MXD4Q14582 209 aaPredicted RBP17.27■□□□□ 0.35
CLIP4-201ENST00000320081 MFSD7Q6UXD7 560 aa17.27■□□□□ 0.35
CLIP4-201ENST00000320081 C1orf186Q6ZWK4 172 aa17.27■□□□□ 0.35
CLIP4-201ENST00000320081 LNX1Q8TBB1 728 aaPredicted RBP17.27■□□□□ 0.35
CLIP4-201ENST00000320081 ZNF606Q8WXB4 792 aa17.27■□□□□ 0.35
CLIP4-201ENST00000320081 FDXACB1Q9BRP7 624 aaPredicted RBP17.27■□□□□ 0.35
CLIP4-201ENST00000320081 PSMC3IPQ9P2W1 217 aaPredicted RBP17.27■□□□□ 0.35
CLIP4-201ENST00000320081 PBX1P40424 430 aa17.27■□□□□ 0.35
CLIP4-201ENST00000320081 RBP5P82980 135 aa17.27■□□□□ 0.35
CLIP4-201ENST00000320081 CUL3Q13618 768 aa17.27■□□□□ 0.35
CLIP4-201ENST00000320081 AGBL2Q5U5Z8 902 aa17.27■□□□□ 0.35
CLIP4-201ENST00000320081 AMIGO3Q86WK7 504 aa17.27■□□□□ 0.35
CLIP4-201ENST00000320081 FBXO36Q8NEA4 188 aa17.27■□□□□ 0.35
CLIP4-201ENST00000320081 ADRB2P07550 413 aa17.26■□□□□ 0.35
CLIP4-201ENST00000320081 PIGHQ14442 188 aaPredicted RBP17.26■□□□□ 0.35
CLIP4-201ENST00000320081 MAP3K21Q5TCX8 1036 aa17.26■□□□□ 0.35
CLIP4-201ENST00000320081 ALG3Q92685 438 aa17.26■□□□□ 0.35
CLIP4-201ENST00000320081 FAM163AQ96GL9 167 aaPredicted RBP17.26■□□□□ 0.35
CLIP4-201ENST00000320081 NEURL4Q96JN8 1562 aa17.26■□□□□ 0.35
CLIP4-201ENST00000320081 AMPD2Q01433 879 aa17.26■□□□□ 0.35
CLIP4-201ENST00000320081 GOLGA7BQ2TAP0 167 aa17.26■□□□□ 0.35
CLIP4-201ENST00000320081 CYB5D1Q6P9G0 228 aa17.26■□□□□ 0.35
CLIP4-201ENST00000320081 RASSF3Q86WH2 238 aa17.26■□□□□ 0.35
CLIP4-201ENST00000320081 IFNEQ86WN2 208 aa17.26■□□□□ 0.35
CLIP4-201ENST00000320081 CCDC60Q8IWA6 550 aaPredicted RBP17.26■□□□□ 0.35
CLIP4-201ENST00000320081 SLC7A14Q8TBB6 771 aa17.26■□□□□ 0.35
CLIP4-201ENST00000320081 TRIM56Q9BRZ2 755 aaKnown RBP17.26■□□□□ 0.35
CLIP4-201ENST00000320081 SMARCAD1Q9H4L7 1026 aa17.26■□□□□ 0.35
CLIP4-201ENST00000320081 B2RBV5 119 aa17.26■□□□□ 0.35
CLIP4-201ENST00000320081 DDNO94850 711 aaPredicted RBP17.26■□□□□ 0.35
CLIP4-201ENST00000320081 EEF1B2P24534 225 aaKnown RBP17.26■□□□□ 0.35
CLIP4-201ENST00000320081 NR1H3Q13133 447 aa17.26■□□□□ 0.35
CLIP4-201ENST00000320081 KRT80Q6KB66 452 aa17.26■□□□□ 0.35
CLIP4-201ENST00000320081 ISLR2Q6UXK2 745 aa17.26■□□□□ 0.35
CLIP4-201ENST00000320081 RBM46Q8TBY0 533 aaKnown RBP17.26■□□□□ 0.35
CLIP4-201ENST00000320081 LUC7L3O95232 432 aaKnown RBP17.25■□□□□ 0.35
CLIP4-201ENST00000320081 MT-CO1P00395 513 aa17.25■□□□□ 0.35
CLIP4-201ENST00000320081 ZNF286BP0CG31 522 aa17.25■□□□□ 0.35
CLIP4-201ENST00000320081 PTENP60484 403 aa17.25■□□□□ 0.35
CLIP4-201ENST00000320081 VPS39Q96JC1 886 aa17.25■□□□□ 0.35
CLIP4-201ENST00000320081 KCNMB3Q9NPA1 279 aa17.25■□□□□ 0.35
CLIP4-201ENST00000320081 RARGP13631 454 aa17.25■□□□□ 0.35
CLIP4-201ENST00000320081 YWHAHQ04917 246 aaPredicted RBP17.25■□□□□ 0.35
CLIP4-201ENST00000320081 MOXD1Q6UVY6 613 aa17.25■□□□□ 0.35
CLIP4-201ENST00000320081 LAYNQ6UX15 382 aa17.25■□□□□ 0.35
CLIP4-201ENST00000320081 CERKQ8TCT0 537 aa17.25■□□□□ 0.35
CLIP4-201ENST00000320081 DDX20Q9UHI6 824 aaKnown RBP17.25■□□□□ 0.35
CLIP4-201ENST00000320081 DNPEPQ9ULA0 475 aa17.25■□□□□ 0.35
CLIP4-201ENST00000320081 TGFB1I1O43294 461 aa17.25■□□□□ 0.35
CLIP4-201ENST00000320081 CYP2C9P11712 490 aa17.25■□□□□ 0.35
CLIP4-201ENST00000320081 ACO1P21399 889 aaKnown RBP17.25■□□□□ 0.35
CLIP4-201ENST00000320081 TPI1P60174 286 aa17.25■□□□□ 0.35
CLIP4-201ENST00000320081 STYK1Q6J9G0 422 aa17.25■□□□□ 0.35
CLIP4-201ENST00000320081 FAM117BQ6P1L5 589 aa17.25■□□□□ 0.35
CLIP4-201ENST00000320081 EPS8L1Q8TE68 723 aa17.25■□□□□ 0.35
CLIP4-201ENST00000320081 L3MBTL3Q96JM7 780 aaPredicted RBP17.25■□□□□ 0.35
CLIP4-201ENST00000320081 MRPL46Q9H2W6 279 aaKnown RBP17.25■□□□□ 0.35
CLIP4-201ENST00000320081 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP17.25■□□□□ 0.35
CLIP4-201ENST00000320081 LRFN2Q9ULH4 789 aa17.25■□□□□ 0.35
CLIP4-201ENST00000320081 NAALADL1Q9UQQ1 740 aa17.25■□□□□ 0.35
CLIP4-201ENST00000320081 OGTO15294 1046 aa17.24■□□□□ 0.35
CLIP4-201ENST00000320081 BANF1O75531 89 aa17.24■□□□□ 0.35
CLIP4-201ENST00000320081 DNAJC18Q9H819 358 aa17.24■□□□□ 0.35
CLIP4-201ENST00000320081 STOML1Q9UBI4 398 aa17.24■□□□□ 0.35
CLIP4-201ENST00000320081 SUPT20HL2P0C7V6 817 aa17.24■□□□□ 0.35
CLIP4-201ENST00000320081 ENO3P13929 434 aaPredicted RBP17.24■□□□□ 0.35
CLIP4-201ENST00000320081 ABCG1P45844 678 aa17.24■□□□□ 0.35
CLIP4-201ENST00000320081 PRAMEP78395 509 aa17.24■□□□□ 0.35
CLIP4-201ENST00000320081 PCNX4Q63HM2 1172 aa17.24■□□□□ 0.35
CLIP4-201ENST00000320081 COPS5Q92905 334 aa17.24■□□□□ 0.35
CLIP4-201ENST00000320081 ZNF669Q96BR6 464 aaPredicted RBP17.24■□□□□ 0.35
CLIP4-201ENST00000320081 hCG_2014768A0A024R1R8 64 aa17.24■□□□□ 0.35
CLIP4-201ENST00000320081 AIM2O14862 343 aa17.24■□□□□ 0.35
CLIP4-201ENST00000320081 ANXA13P27216 316 aa17.24■□□□□ 0.35
CLIP4-201ENST00000320081 SCTRP47872 440 aa17.24■□□□□ 0.35
CLIP4-201ENST00000320081 CES3Q6UWW8 571 aa17.24■□□□□ 0.35
CLIP4-201ENST00000320081 GMCL1P1Q8NEA9 526 aa17.24■□□□□ 0.35
CLIP4-201ENST00000320081 ADAM32Q8TC27 787 aa17.24■□□□□ 0.35
CLIP4-201ENST00000320081 PRG3Q9Y2Y8 225 aaPredicted RBP17.24■□□□□ 0.35
CLIP4-201ENST00000320081 DLG5Q8TDM6 1919 aa17.24■□□□□ 0.35
CLIP4-201ENST00000320081 KDM4FA0A1W2PPD8 638 aa17.24■□□□□ 0.35
CLIP4-201ENST00000320081 ZBBXA8MT70 800 aa17.24■□□□□ 0.35
CLIP4-201ENST00000320081 C19orf81C9J6K1 198 aa17.24■□□□□ 0.35
CLIP4-201ENST00000320081 SKAP2O75563 359 aaPredicted RBP17.24■□□□□ 0.35
CLIP4-201ENST00000320081 GLRBP48167 497 aa17.24■□□□□ 0.35
CLIP4-201ENST00000320081 CHI3L2Q15782 390 aa17.24■□□□□ 0.35
CLIP4-201ENST00000320081 BZW1Q7L1Q6 419 aaKnown RBP17.24■□□□□ 0.35
CLIP4-201ENST00000320081 SLC25A41Q8N5S1 370 aa17.24■□□□□ 0.35
CLIP4-201ENST00000320081 CEP120Q8N960 986 aa17.24■□□□□ 0.35
CLIP4-201ENST00000320081 SHISA4Q96DD7 197 aa17.24■□□□□ 0.35
CLIP4-201ENST00000320081 SGSM3Q96HU1 749 aa17.24■□□□□ 0.35
CLIP4-201ENST00000320081 TMEM237Q96Q45 408 aa17.24■□□□□ 0.35
CLIP4-201ENST00000320081 FDX1P10109 184 aa17.23■□□□□ 0.35
CLIP4-201ENST00000320081 ACAT1P24752 427 aaKnown RBP17.23■□□□□ 0.35
Retrieved 100 of 20,778 RNA–protein pairs in 22.5 ms