RNA–Protein interactions for RNA: ENST00000319420.3

SHISA2-201, Transcript of shisa family member 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SHISA2, Length 2,860 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHISA2-201ENST00000319420 PLXNA1Q9UIW2 1896 aa16.88■□□□□ 0.29
SHISA2-201ENST00000319420 MYADML2A6NDP7 307 aa16.87■□□□□ 0.29
SHISA2-201ENST00000319420 H0YGN5 161 aa16.87■□□□□ 0.29
SHISA2-201ENST00000319420 IL18RAPO95256 599 aa16.87■□□□□ 0.29
SHISA2-201ENST00000319420 PGK1P00558 417 aa16.87■□□□□ 0.29
SHISA2-201ENST00000319420 HOXA11P31270 313 aaPredicted RBP16.87■□□□□ 0.29
SHISA2-201ENST00000319420 RFC1P35251 1148 aaPredicted RBP16.87■□□□□ 0.29
SHISA2-201ENST00000319420 PSMC1P62191 440 aaKnown RBP16.87■□□□□ 0.29
SHISA2-201ENST00000319420 ZNF467Q7Z7K2 595 aaPredicted RBP16.87■□□□□ 0.29
SHISA2-201ENST00000319420 RAB17Q9H0T7 212 aa16.87■□□□□ 0.29
SHISA2-201ENST00000319420 NFS1Q9Y697 457 aa16.87■□□□□ 0.29
SHISA2-201ENST00000319420 SCN4AP35499 1836 aa16.87■□□□□ 0.29
SHISA2-201ENST00000319420 A0A1B0GUA9 196 aa16.87■□□□□ 0.29
SHISA2-201ENST00000319420 MYBL1P10243 752 aa16.87■□□□□ 0.29
SHISA2-201ENST00000319420 PTGIRP43119 386 aa16.87■□□□□ 0.29
SHISA2-201ENST00000319420 NDST1P52848 882 aa16.87■□□□□ 0.29
SHISA2-201ENST00000319420 ENPEPQ07075 957 aa16.87■□□□□ 0.29
SHISA2-201ENST00000319420 DUPD1Q68J44 220 aa16.87■□□□□ 0.29
SHISA2-201ENST00000319420 TRIM72Q6ZMU5 477 aa16.87■□□□□ 0.29
SHISA2-201ENST00000319420 C7orf31Q8N865 590 aa16.87■□□□□ 0.29
SHISA2-201ENST00000319420 JOSD2Q8TAC2 188 aa16.87■□□□□ 0.29
SHISA2-201ENST00000319420 EMID1Q96A84 441 aaPredicted RBP16.87■□□□□ 0.29
SHISA2-201ENST00000319420 RNF39Q9H2S5 420 aa16.87■□□□□ 0.29
SHISA2-201ENST00000319420 AVENQ9NQS1 362 aaPredicted RBP16.87■□□□□ 0.29
SHISA2-201ENST00000319420 SAE1Q9UBE0 346 aaPredicted RBP16.87■□□□□ 0.29
SHISA2-201ENST00000319420 COILP38432 576 aaPredicted RBP16.87■□□□□ 0.29
SHISA2-201ENST00000319420 IRAK1P51617 712 aa16.87■□□□□ 0.29
SHISA2-201ENST00000319420 CRHR2Q13324 411 aa16.87■□□□□ 0.29
SHISA2-201ENST00000319420 CDO1Q16878 200 aa16.87■□□□□ 0.29
SHISA2-201ENST00000319420 PHF13Q86YI8 300 aaPredicted RBP16.87■□□□□ 0.29
SHISA2-201ENST00000319420 DDX27Q96GQ7 796 aaKnown RBP16.87■□□□□ 0.29
SHISA2-201ENST00000319420 PWWP2AQ96N64 755 aa16.87■□□□□ 0.29
SHISA2-201ENST00000319420 GCOM2Q9BZD3 368 aaPredicted RBP16.87■□□□□ 0.29
SHISA2-201ENST00000319420 C10orf88Q9H8K7 445 aa16.87■□□□□ 0.29
SHISA2-201ENST00000319420 TLDC2A0PJX2 215 aa16.86■□□□□ 0.29
SHISA2-201ENST00000319420 PDGFRBP09619 1106 aa16.86■□□□□ 0.29
SHISA2-201ENST00000319420 ZNF252P-AS1Q0IIN9 211 aa16.86■□□□□ 0.29
SHISA2-201ENST00000319420 PLEKHA7Q6IQ23 1121 aa16.86■□□□□ 0.29
SHISA2-201ENST00000319420 B4GALNT4Q76KP1 1039 aa16.86■□□□□ 0.29
SHISA2-201ENST00000319420 TMC3Q7Z5M5 1100 aa16.86■□□□□ 0.29
SHISA2-201ENST00000319420 ACOT1Q86TX2 421 aa16.86■□□□□ 0.29
SHISA2-201ENST00000319420 SAPCD2Q86UD0 394 aa16.86■□□□□ 0.29
SHISA2-201ENST00000319420 CNPY4Q8N129 248 aa16.86■□□□□ 0.29
SHISA2-201ENST00000319420 UBR7Q8N806 425 aa16.86■□□□□ 0.29
SHISA2-201ENST00000319420 SLC4A11Q8NBS3 891 aa16.86■□□□□ 0.29
SHISA2-201ENST00000319420 AP5M1Q9H0R1 490 aa16.86■□□□□ 0.29
SHISA2-201ENST00000319420 CNTN6Q9UQ52 1028 aa16.86■□□□□ 0.29
SHISA2-201ENST00000319420 LRRD1A4D1F6 860 aa16.86■□□□□ 0.29
SHISA2-201ENST00000319420 KRT1P04264 644 aa16.86■□□□□ 0.29
SHISA2-201ENST00000319420 ZNF865P0CJ78 1059 aaPredicted RBP16.86■□□□□ 0.29
SHISA2-201ENST00000319420 CHRNA3P32297 505 aa16.86■□□□□ 0.29
SHISA2-201ENST00000319420 PTPN11Q06124 597 aaPredicted RBP16.86■□□□□ 0.29
SHISA2-201ENST00000319420 C1QBPQ07021 282 aaKnown RBP16.86■□□□□ 0.29
SHISA2-201ENST00000319420 NFX1Q12986 1120 aaKnown RBP16.86■□□□□ 0.29
SHISA2-201ENST00000319420 SIX1Q15475 284 aaPredicted RBP16.86■□□□□ 0.29
SHISA2-201ENST00000319420 CXCL17Q6UXB2 119 aa16.86■□□□□ 0.29
SHISA2-201ENST00000319420 RHOT1Q8IXI2 618 aa16.86■□□□□ 0.29
SHISA2-201ENST00000319420 KCNN1Q92952 543 aa16.86■□□□□ 0.29
SHISA2-201ENST00000319420 PLVAPQ9BX97 442 aa16.86■□□□□ 0.29
SHISA2-201ENST00000319420 RASAL2Q9UJF2 1139 aa16.86■□□□□ 0.29
SHISA2-201ENST00000319420 GNEQ9Y223 722 aaKnown RBP16.86■□□□□ 0.29
SHISA2-201ENST00000319420 SCINQ9Y6U3 715 aa16.86■□□□□ 0.29
SHISA2-201ENST00000319420 LOC102724159A0A0B4J2E5 919 aa16.85■□□□□ 0.29
SHISA2-201ENST00000319420 A6NJR5 290 aa16.85■□□□□ 0.29
SHISA2-201ENST00000319420 TULP2O00295 520 aa16.85■□□□□ 0.29
SHISA2-201ENST00000319420 RECQL4O94761 1208 aa16.85■□□□□ 0.29
SHISA2-201ENST00000319420 PSMA2P25787 234 aa16.85■□□□□ 0.29
SHISA2-201ENST00000319420 CTNNA2P26232 953 aa16.85■□□□□ 0.29
SHISA2-201ENST00000319420 CTGFP29279 349 aa16.85■□□□□ 0.29
SHISA2-201ENST00000319420 KRT17Q04695 432 aa16.85■□□□□ 0.29
SHISA2-201ENST00000319420 PDCLQ13371 301 aa16.85■□□□□ 0.29
SHISA2-201ENST00000319420 PWP2Q15269 919 aaKnown RBP16.85■□□□□ 0.29
SHISA2-201ENST00000319420 GNASQ5JWF2 1037 aa16.85■□□□□ 0.29
SHISA2-201ENST00000319420 MORN1Q5T089 497 aa16.85■□□□□ 0.29
SHISA2-201ENST00000319420 EIF1ADQ8N9N8 165 aaKnown RBP16.85■□□□□ 0.29
SHISA2-201ENST00000319420 CAPS2Q9BXY5 557 aa16.85■□□□□ 0.29
SHISA2-201ENST00000319420 METTL5Q9NRN9 209 aaKnown RBP16.85■□□□□ 0.29
SHISA2-201ENST00000319420 ZDHHC18Q9NUE0 388 aa16.85■□□□□ 0.29
SHISA2-201ENST00000319420 CALCOCO1Q9P1Z2 691 aa16.85■□□□□ 0.29
SHISA2-201ENST00000319420 KRT3P12035 628 aa16.85■□□□□ 0.29
SHISA2-201ENST00000319420 GNGT1P63211 74 aa16.85■□□□□ 0.29
SHISA2-201ENST00000319420 PLCB3Q01970 1234 aa16.85■□□□□ 0.29
SHISA2-201ENST00000319420 IFFO1Q0D2I5 559 aa16.85■□□□□ 0.29
SHISA2-201ENST00000319420 MTM1Q13496 603 aa16.85■□□□□ 0.29
SHISA2-201ENST00000319420 GSTA5Q7RTV2 222 aa16.85■□□□□ 0.29
SHISA2-201ENST00000319420 TMEM176AQ96HP8 235 aa16.85■□□□□ 0.29
SHISA2-201ENST00000319420 NFKBIZQ9BYH8 718 aa16.85■□□□□ 0.29
SHISA2-201ENST00000319420 ADAMTS10Q9H324 1103 aa16.85■□□□□ 0.29
SHISA2-201ENST00000319420 MGAMO43451 1857 aa16.85■□□□□ 0.29
SHISA2-201ENST00000319420 LAMA3Q16787 3333 aa16.84■□□□□ 0.29
SHISA2-201ENST00000319420 SHOX2O60902 331 aaPredicted RBP16.84■□□□□ 0.29
SHISA2-201ENST00000319420 GPR32O75388 356 aa16.84■□□□□ 0.29
SHISA2-201ENST00000319420 MICAL2O94851 1124 aa16.84■□□□□ 0.29
SHISA2-201ENST00000319420 ECEL1O95672 775 aa16.84■□□□□ 0.29
SHISA2-201ENST00000319420 F2P00734 622 aa16.84■□□□□ 0.29
SHISA2-201ENST00000319420 ERBB2P04626 1255 aa16.84■□□□□ 0.29
SHISA2-201ENST00000319420 YARSP54577 528 aaKnown RBP16.84■□□□□ 0.29
SHISA2-201ENST00000319420 ZNF844Q08AG5 666 aa16.84■□□□□ 0.29
SHISA2-201ENST00000319420 RAB6CQ53S08 254 aa16.84■□□□□ 0.29
SHISA2-201ENST00000319420 RGMBQ6NW40 437 aa16.84■□□□□ 0.29
Retrieved 100 of 20,778 RNA–protein pairs in 16.1 ms