RNA–Protein interactions for RNA: ENST00000318007.9

PDLIM5-202, Transcript of PDZ and LIM domain 5, humanhuman

TSL 1 (best) BASIC

Gene PDLIM5, Length 1,960 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM5-202ENST00000318007 STXBP5LQ9Y2K9 1186 aa16.41■□□□□ 0.22
PDLIM5-202ENST00000318007 TSC2P49815 1807 aa16.41■□□□□ 0.22
PDLIM5-202ENST00000318007 VWA8A3KMH1 1905 aa16.41■□□□□ 0.22
PDLIM5-202ENST00000318007 TMEM189-UBE2V1I3L0A0 370 aa16.4■□□□□ 0.22
PDLIM5-202ENST00000318007 M0QZQ0 153 aa16.4■□□□□ 0.22
PDLIM5-202ENST00000318007 FERP16591 822 aa16.4■□□□□ 0.22
PDLIM5-202ENST00000318007 EIF4A3P38919 411 aaKnown RBP16.4■□□□□ 0.22
PDLIM5-202ENST00000318007 YWHAEP62258 255 aaKnown RBP16.4■□□□□ 0.22
PDLIM5-202ENST00000318007 MLLT1Q03111 559 aaPredicted RBP16.4■□□□□ 0.22
PDLIM5-202ENST00000318007 GFPT1Q06210 699 aaPredicted RBP16.4■□□□□ 0.22
PDLIM5-202ENST00000318007 METTL23Q86XA0 190 aa16.4■□□□□ 0.22
PDLIM5-202ENST00000318007 PALB2Q86YC2 1186 aa16.4■□□□□ 0.22
PDLIM5-202ENST00000318007 TMEM139Q8IV31 216 aa16.4■□□□□ 0.22
PDLIM5-202ENST00000318007 TDHQ8IZJ6 230 aa16.4■□□□□ 0.22
PDLIM5-202ENST00000318007 OR10T2Q8NGX3 314 aa16.4■□□□□ 0.22
PDLIM5-202ENST00000318007 TRIM44Q96DX7 344 aaPredicted RBP16.4■□□□□ 0.22
PDLIM5-202ENST00000318007 PANX2Q96RD6 677 aa16.4■□□□□ 0.22
PDLIM5-202ENST00000318007 ZSWIM1Q9BR11 485 aa16.4■□□□□ 0.22
PDLIM5-202ENST00000318007 DESI2Q9BSY9 194 aa16.4■□□□□ 0.22
PDLIM5-202ENST00000318007 EDEM3Q9BZQ6 932 aa16.4■□□□□ 0.22
PDLIM5-202ENST00000318007 PDCL3Q9H2J4 239 aa16.4■□□□□ 0.22
PDLIM5-202ENST00000318007 NHEJ1Q9H9Q4 299 aaPredicted RBP16.4■□□□□ 0.22
PDLIM5-202ENST00000318007 SPG21Q9NZD8 308 aa16.4■□□□□ 0.22
PDLIM5-202ENST00000318007 AIPL1Q9NZN9 384 aa16.4■□□□□ 0.22
PDLIM5-202ENST00000318007 ADAMTS1Q9UHI8 967 aa16.4■□□□□ 0.22
PDLIM5-202ENST00000318007 GTF3C4Q9UKN8 822 aa16.4■□□□□ 0.22
PDLIM5-202ENST00000318007 ADORA2BP29275 332 aa16.4■□□□□ 0.22
PDLIM5-202ENST00000318007 CCZ1BP86790 482 aa16.4■□□□□ 0.22
PDLIM5-202ENST00000318007 CCZ1P86791 482 aaPredicted RBP16.4■□□□□ 0.22
PDLIM5-202ENST00000318007 INCA1Q0VD86 236 aa16.4■□□□□ 0.22
PDLIM5-202ENST00000318007 MDH1BQ5I0G3 518 aa16.4■□□□□ 0.22
PDLIM5-202ENST00000318007 VPS52Q8N1B4 723 aa16.4■□□□□ 0.22
PDLIM5-202ENST00000318007 RIN2Q8WYP3 895 aaPredicted RBP16.4■□□□□ 0.22
PDLIM5-202ENST00000318007 FAM81BQ96LP2 452 aa16.4■□□□□ 0.22
PDLIM5-202ENST00000318007 PGLYRP2Q96PD5 576 aa16.4■□□□□ 0.22
PDLIM5-202ENST00000318007 RTP3Q9BQQ7 232 aa16.4■□□□□ 0.22
PDLIM5-202ENST00000318007 RHOBTB2Q9BYZ6 727 aa16.4■□□□□ 0.22
PDLIM5-202ENST00000318007 NKX2-4Q9H2Z4 354 aa16.4■□□□□ 0.22
PDLIM5-202ENST00000318007 AAASQ9NRG9 546 aa16.4■□□□□ 0.22
PDLIM5-202ENST00000318007 PCDHGC5Q9Y5F6 944 aa16.4■□□□□ 0.22
PDLIM5-202ENST00000318007 C5orf42Q9H799 3197 aa16.39■□□□□ 0.21
PDLIM5-202ENST00000318007 CLDN5O00501 218 aa16.39■□□□□ 0.21
PDLIM5-202ENST00000318007 TACC1O75410 805 aa16.39■□□□□ 0.21
PDLIM5-202ENST00000318007 SERPING1P05155 500 aa16.39■□□□□ 0.21
PDLIM5-202ENST00000318007 CYP27A1Q02318 531 aa16.39■□□□□ 0.21
PDLIM5-202ENST00000318007 RAD9BQ6WBX8 426 aa16.39■□□□□ 0.21
PDLIM5-202ENST00000318007 JAKMIP2Q96AA8 810 aa16.39■□□□□ 0.21
PDLIM5-202ENST00000318007 NUCKS1Q9H1E3 243 aaKnown RBP16.39■□□□□ 0.21
PDLIM5-202ENST00000318007 PCDHB8Q9UN66 801 aa16.39■□□□□ 0.21
PDLIM5-202ENST00000318007 GTF3C5Q9Y5Q8 519 aaPredicted RBP16.39■□□□□ 0.21
PDLIM5-202ENST00000318007 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP16.39■□□□□ 0.212e-8■■■■□ 25.8
PDLIM5-202ENST00000318007 SPTBN5Q9NRC6 3674 aaKnown RBP16.39■□□□□ 0.21
PDLIM5-202ENST00000318007 MYBPHLA2RUH7 354 aa16.38■□□□□ 0.21
PDLIM5-202ENST00000318007 WARSP23381 471 aaKnown RBP16.38■□□□□ 0.21
PDLIM5-202ENST00000318007 ZNF132P52740 706 aa16.38■□□□□ 0.21
PDLIM5-202ENST00000318007 CTXN3Q4LDR2 81 aa16.38■□□□□ 0.21
PDLIM5-202ENST00000318007 C2CD6Q53TS8 623 aa16.38■□□□□ 0.21
PDLIM5-202ENST00000318007 PPP1R26Q5T8A7 1209 aaPredicted RBP16.38■□□□□ 0.21
PDLIM5-202ENST00000318007 CYP26C1Q6V0L0 522 aa16.38■□□□□ 0.21
PDLIM5-202ENST00000318007 B3GALNT2Q8NCR0 500 aa16.38■□□□□ 0.21
PDLIM5-202ENST00000318007 SP7Q8TDD2 431 aaPredicted RBP16.38■□□□□ 0.21
PDLIM5-202ENST00000318007 CLP1Q92989 425 aaKnown RBP16.38■□□□□ 0.21
PDLIM5-202ENST00000318007 CCDC42Q96M95 316 aa16.38■□□□□ 0.21
PDLIM5-202ENST00000318007 SYT15Q9BQS2 421 aa16.38■□□□□ 0.21
PDLIM5-202ENST00000318007 TTPALQ9BTX7 342 aa16.38■□□□□ 0.21
PDLIM5-202ENST00000318007 NOCTQ9UK39 431 aaKnown RBP16.38■□□□□ 0.21
PDLIM5-202ENST00000318007 TFR2Q9UP52 801 aa16.38■□□□□ 0.21
PDLIM5-202ENST00000318007 NLRC5Q86WI3 1866 aa16.38■□□□□ 0.21
PDLIM5-202ENST00000318007 PLXNA4Q9HCM2 1894 aa16.38■□□□□ 0.21
PDLIM5-202ENST00000318007 PIK3R2O00459 728 aa16.38■□□□□ 0.21
PDLIM5-202ENST00000318007 GABRDO14764 452 aa16.38■□□□□ 0.21
PDLIM5-202ENST00000318007 AKR1B10O60218 316 aa16.38■□□□□ 0.21
PDLIM5-202ENST00000318007 KCNA4P22459 653 aa16.38■□□□□ 0.21
PDLIM5-202ENST00000318007 RGS19P49795 217 aa16.38■□□□□ 0.21
PDLIM5-202ENST00000318007 MEA1Q16626 185 aa16.38■□□□□ 0.21
PDLIM5-202ENST00000318007 PPP2R2DQ66LE6 453 aa16.38■□□□□ 0.21
PDLIM5-202ENST00000318007 RSPO2Q6UXX9 243 aaPredicted RBP16.38■□□□□ 0.21
PDLIM5-202ENST00000318007 TOGARAM2Q6ZUX3 1019 aa16.38■□□□□ 0.21
PDLIM5-202ENST00000318007 TMEM86AQ8N2M4 240 aa16.38■□□□□ 0.21
PDLIM5-202ENST00000318007 UBA3Q8TBC4 463 aa16.38■□□□□ 0.21
PDLIM5-202ENST00000318007 SLC2A14Q8TDB8 520 aa16.38■□□□□ 0.21
PDLIM5-202ENST00000318007 ZNF606Q8WXB4 792 aa16.38■□□□□ 0.21
PDLIM5-202ENST00000318007 ARNTL2Q8WYA1 636 aa16.38■□□□□ 0.21
PDLIM5-202ENST00000318007 CRTAC1Q9NQ79 661 aa16.38■□□□□ 0.21
PDLIM5-202ENST00000318007 MYO6Q9UM54 1294 aa16.38■□□□□ 0.21
PDLIM5-202ENST00000318007 PRUNE2Q8WUY3 3088 aa16.38■□□□□ 0.21
PDLIM5-202ENST00000318007 HSFX4A0A1B0GTS1 333 aaPredicted RBP16.37■□□□□ 0.21
PDLIM5-202ENST00000318007 HSFX3A0A1B0GWH4 333 aaPredicted RBP16.37■□□□□ 0.21
PDLIM5-202ENST00000318007 CPB1P15086 417 aa16.37■□□□□ 0.21
PDLIM5-202ENST00000318007 LHX1P48742 406 aa16.37■□□□□ 0.21
PDLIM5-202ENST00000318007 KIF11P52732 1056 aa16.37■□□□□ 0.21
PDLIM5-202ENST00000318007 USP41Q3LFD5 358 aa16.37■□□□□ 0.21
PDLIM5-202ENST00000318007 SLC39A12Q504Y0 691 aa16.37■□□□□ 0.21
PDLIM5-202ENST00000318007 LIMS2Q7Z4I7 341 aa16.37■□□□□ 0.21
PDLIM5-202ENST00000318007 LRRTM3Q86VH5 581 aa16.37■□□□□ 0.21
PDLIM5-202ENST00000318007 ACRBPQ8NEB7 543 aa16.37■□□□□ 0.21
PDLIM5-202ENST00000318007 LNX1Q8TBB1 728 aaPredicted RBP16.37■□□□□ 0.21
PDLIM5-202ENST00000318007 AGPAT1Q99943 283 aa16.37■□□□□ 0.21
PDLIM5-202ENST00000318007 MED10Q9BTT4 135 aa16.37■□□□□ 0.21
PDLIM5-202ENST00000318007 TMLHEQ9NVH6 421 aa16.37■□□□□ 0.21
Retrieved 100 of 20,778 RNA–protein pairs in 29.3 ms