RNA–Protein interactions for RNA: ENST00000317677.9

CPNE1-201, Transcript of copine 1, humanhuman

TSL 1 (best) BASIC

Gene CPNE1, Length 1,961 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE1-201ENST00000317677 PIK3R5Q8WYR1 880 aa13.85□□□□□ -0.19
CPNE1-201ENST00000317677 ADAMTS10Q9H324 1103 aa13.85□□□□□ -0.19
CPNE1-201ENST00000317677 CDHR5Q9HBB8 845 aa13.85□□□□□ -0.19
CPNE1-201ENST00000317677 CHORDC1Q9UHD1 332 aaPredicted RBP13.85□□□□□ -0.19
CPNE1-201ENST00000317677 TNPO2O14787 897 aaKnown RBP13.85□□□□□ -0.19
CPNE1-201ENST00000317677 ATMINO43313 823 aaPredicted RBP13.85□□□□□ -0.19
CPNE1-201ENST00000317677 KIF4AO95239 1232 aa13.85□□□□□ -0.19
CPNE1-201ENST00000317677 LINGO3P0C6S8 592 aa13.85□□□□□ -0.19
CPNE1-201ENST00000317677 HOXD10P28358 340 aa13.85□□□□□ -0.19
CPNE1-201ENST00000317677 PDE6CP51160 858 aa13.85□□□□□ -0.19
CPNE1-201ENST00000317677 MYL6P60660 151 aa13.85□□□□□ -0.19
CPNE1-201ENST00000317677 ADAM17P78536 824 aa13.85□□□□□ -0.19
CPNE1-201ENST00000317677 TMEM62Q0P6H9 643 aa13.85□□□□□ -0.19
CPNE1-201ENST00000317677 BYSLQ13895 437 aaKnown RBP13.85□□□□□ -0.19
CPNE1-201ENST00000317677 WDR44Q5JSH3 913 aa13.85□□□□□ -0.19
CPNE1-201ENST00000317677 IFT20Q8IY31 132 aa13.85□□□□□ -0.19
CPNE1-201ENST00000317677 CTNNBL1Q8WYA6 563 aaPredicted RBP13.85□□□□□ -0.19
CPNE1-201ENST00000317677 ZNF570Q96NI8 536 aa13.85□□□□□ -0.19
CPNE1-201ENST00000317677 GDF3Q9NR23 364 aa13.85□□□□□ -0.19
CPNE1-201ENST00000317677 PAPOLBQ9NRJ5 636 aaKnown RBP13.85□□□□□ -0.19
CPNE1-201ENST00000317677 CNTN6Q9UQ52 1028 aa13.85□□□□□ -0.19
CPNE1-201ENST00000317677 TRIP11Q15643 1979 aa13.84□□□□□ -0.19
CPNE1-201ENST00000317677 MBLAC1A4D2B0 266 aaPredicted RBP13.84□□□□□ -0.19
CPNE1-201ENST00000317677 B4GALT4O60513 344 aa13.84□□□□□ -0.19
CPNE1-201ENST00000317677 GPR32O75388 356 aa13.84□□□□□ -0.19
CPNE1-201ENST00000317677 GZMAP12544 262 aa13.84□□□□□ -0.19
CPNE1-201ENST00000317677 TMOD1P28289 359 aa13.84□□□□□ -0.19
CPNE1-201ENST00000317677 MTA1Q13330 715 aa13.84□□□□□ -0.19
CPNE1-201ENST00000317677 TCEAL1Q15170 157 aa13.84□□□□□ -0.19
CPNE1-201ENST00000317677 KIZQ2M2Z5 673 aa13.84□□□□□ -0.19
CPNE1-201ENST00000317677 CCDC181Q5TID7 509 aa13.84□□□□□ -0.19
CPNE1-201ENST00000317677 NT5DC3Q86UY8 548 aa13.84□□□□□ -0.19
CPNE1-201ENST00000317677 GALNT15Q8N3T1 639 aa13.84□□□□□ -0.19
CPNE1-201ENST00000317677 EIF1ADQ8N9N8 165 aaKnown RBP13.84□□□□□ -0.19
CPNE1-201ENST00000317677 NLRP7Q8WX94 980 aa13.84□□□□□ -0.19
CPNE1-201ENST00000317677 SOCS4Q8WXH5 440 aa13.84□□□□□ -0.19
CPNE1-201ENST00000317677 EZH1Q92800 747 aaPredicted RBP13.84□□□□□ -0.19
CPNE1-201ENST00000317677 XYLT2Q9H1B5 865 aa13.84□□□□□ -0.19
CPNE1-201ENST00000317677 TMBIM4Q9HC24 238 aa13.84□□□□□ -0.19
CPNE1-201ENST00000317677 BAIAP2L1Q9UHR4 511 aa13.84□□□□□ -0.19
CPNE1-201ENST00000317677 SLC12A6Q9UHW9 1150 aa13.84□□□□□ -0.19
CPNE1-201ENST00000317677 GABRQQ9UN88 632 aa13.84□□□□□ -0.19
CPNE1-201ENST00000317677 CITO14578 2027 aa13.84□□□□□ -0.19
CPNE1-201ENST00000317677 MYADML2A6NDP7 307 aa13.83□□□□□ -0.19
CPNE1-201ENST00000317677 PDLIM1O00151 329 aa13.83□□□□□ -0.19
CPNE1-201ENST00000317677 NFICP08651 508 aa13.83□□□□□ -0.19
CPNE1-201ENST00000317677 STAG3L1P0CL83 205 aa13.83□□□□□ -0.19
CPNE1-201ENST00000317677 SETSIPP0DME0 302 aa13.83□□□□□ -0.19
CPNE1-201ENST00000317677 MCF2P10911 925 aa13.83□□□□□ -0.19
CPNE1-201ENST00000317677 IMPDH2P12268 514 aa13.83□□□□□ -0.19
CPNE1-201ENST00000317677 AP3M2P53677 418 aa13.83□□□□□ -0.19
CPNE1-201ENST00000317677 ZNF200P98182 395 aaPredicted RBP13.83□□□□□ -0.19
CPNE1-201ENST00000317677 LMNB2Q03252 620 aa13.83□□□□□ -0.19
CPNE1-201ENST00000317677 MFSD10Q14728 455 aa13.83□□□□□ -0.19
CPNE1-201ENST00000317677 TMEM132AQ24JP5 1023 aa13.83□□□□□ -0.19
CPNE1-201ENST00000317677 GKAP1Q5VSY0 366 aaPredicted RBP13.83□□□□□ -0.19
CPNE1-201ENST00000317677 TRIM74Q86UV6 250 aa13.83□□□□□ -0.19
CPNE1-201ENST00000317677 TRIM73Q86UV7 250 aa13.83□□□□□ -0.19
CPNE1-201ENST00000317677 CXorf38Q8TB03 319 aa13.83□□□□□ -0.19
CPNE1-201ENST00000317677 FAM49AQ9H0Q0 323 aaPredicted RBP13.83□□□□□ -0.19
CPNE1-201ENST00000317677 SIX4Q9UIU6 781 aa13.83□□□□□ -0.19
CPNE1-201ENST00000317677 RALGAPA2Q2PPJ7 1873 aa13.83□□□□□ -0.2
CPNE1-201ENST00000317677 RRN3P2A6NIE6 340 aa13.83□□□□□ -0.2
CPNE1-201ENST00000317677 CCT8L1PA6NM43 557 aa13.83□□□□□ -0.2
CPNE1-201ENST00000317677 LACTBL1A8MY62 500 aa13.83□□□□□ -0.2
CPNE1-201ENST00000317677 UNGP13051 313 aaPredicted RBP13.83□□□□□ -0.2
CPNE1-201ENST00000317677 CCND1P24385 295 aa13.83□□□□□ -0.2
CPNE1-201ENST00000317677 PSMC4P43686 418 aa13.83□□□□□ -0.2
CPNE1-201ENST00000317677 PSEN2P49810 448 aa13.83□□□□□ -0.2
CPNE1-201ENST00000317677 ZNF132P52740 706 aa13.83□□□□□ -0.2
CPNE1-201ENST00000317677 HADHBP55084 474 aaKnown RBP13.83□□□□□ -0.2
CPNE1-201ENST00000317677 TFAMQ00059 246 aaKnown RBP13.83□□□□□ -0.2
CPNE1-201ENST00000317677 PAK2Q13177 524 aa13.83□□□□□ -0.2
CPNE1-201ENST00000317677 IFI16Q16666 785 aaKnown RBP13.83□□□□□ -0.2
CPNE1-201ENST00000317677 DUOXA2Q1HG44 320 aa13.83□□□□□ -0.2
CPNE1-201ENST00000317677 CLEC16AQ2KHT3 1053 aa13.83□□□□□ -0.2
CPNE1-201ENST00000317677 SLC10A6Q3KNW5 377 aa13.83□□□□□ -0.2
CPNE1-201ENST00000317677 HIBCHQ6NVY1 386 aaPredicted RBP13.83□□□□□ -0.2
CPNE1-201ENST00000317677 WHAMMQ8TF30 809 aa13.83□□□□□ -0.2
CPNE1-201ENST00000317677 FAM81BQ96LP2 452 aa13.83□□□□□ -0.2
CPNE1-201ENST00000317677 CXCL16Q9H2A7 254 aa13.83□□□□□ -0.2
CPNE1-201ENST00000317677 ZFATQ9P243 1243 aa13.83□□□□□ -0.2
CPNE1-201ENST00000317677 SLC12A4Q9UP95 1085 aa13.83□□□□□ -0.2
CPNE1-201ENST00000317677 KIAA0100Q14667 2235 aaKnown RBP13.82□□□□□ -0.2
CPNE1-201ENST00000317677 NRCAMQ92823 1304 aa13.82□□□□□ -0.2
CPNE1-201ENST00000317677 MYL3P08590 195 aa13.82□□□□□ -0.2
CPNE1-201ENST00000317677 FCGRTP55899 365 aa13.82□□□□□ -0.2
CPNE1-201ENST00000317677 GPC5P78333 572 aa13.82□□□□□ -0.2
CPNE1-201ENST00000317677 RPS6KA1Q15418 735 aa13.82□□□□□ -0.2
CPNE1-201ENST00000317677 SURF1Q15526 300 aa13.82□□□□□ -0.2
CPNE1-201ENST00000317677 TMEM270Q6UE05 265 aa13.82□□□□□ -0.2
CPNE1-201ENST00000317677 ZNF410Q86VK4 478 aa13.82□□□□□ -0.2
CPNE1-201ENST00000317677 CPNE8Q86YQ8 564 aa13.82□□□□□ -0.2
CPNE1-201ENST00000317677 RBM12BQ8IXT5 1001 aaKnown RBP13.82□□□□□ -0.2
CPNE1-201ENST00000317677 RBBP8NLQ8NC74 664 aaPredicted RBP13.82□□□□□ -0.2
CPNE1-201ENST00000317677 TBC1D31Q96DN5 1066 aa13.82□□□□□ -0.2
CPNE1-201ENST00000317677 HES6Q96HZ4 224 aa13.82□□□□□ -0.2
CPNE1-201ENST00000317677 RPF1Q9H9Y2 349 aaKnown RBP13.82□□□□□ -0.2
CPNE1-201ENST00000317677 PPANQ9NQ55 473 aaKnown RBP13.82□□□□□ -0.2
CPNE1-201ENST00000317677 RNF14Q9UBS8 474 aa13.82□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 13.6 ms