RNA–Protein interactions for RNA: ENST00000314759.5

SKA3-202, Transcript of spindle and kinetochore associated complex subunit 3, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene SKA3, Length 2,919 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SKA3-202ENST00000314759 GOLGA8SH3BPF8 625 aa14.16□□□□□ -0.14
SKA3-202ENST00000314759 GOLGA8MH3BSY2 632 aa14.16□□□□□ -0.14
SKA3-202ENST00000314759 TJP3O95049 919 aa14.16□□□□□ -0.14
SKA3-202ENST00000314759 EIF2AK2P19525 551 aaKnown RBP14.16□□□□□ -0.14
SKA3-202ENST00000314759 ADRA1DP25100 572 aa14.16□□□□□ -0.14
SKA3-202ENST00000314759 CAP2P40123 477 aa14.16□□□□□ -0.14
SKA3-202ENST00000314759 RASA2Q15283 850 aa14.16□□□□□ -0.14
SKA3-202ENST00000314759 SGSM1Q2NKQ1 1148 aa14.16□□□□□ -0.14
SKA3-202ENST00000314759 TMEM270Q6UE05 265 aa14.16□□□□□ -0.14
SKA3-202ENST00000314759 DSTYKQ6XUX3 929 aa14.16□□□□□ -0.14
SKA3-202ENST00000314759 PHF13Q86YI8 300 aaPredicted RBP14.16□□□□□ -0.14
SKA3-202ENST00000314759 ZNF276Q8N554 614 aa14.16□□□□□ -0.14
SKA3-202ENST00000314759 RBBP8NLQ8NC74 664 aaPredicted RBP14.16□□□□□ -0.14
SKA3-202ENST00000314759 FEZF2Q8TBJ5 459 aa14.16□□□□□ -0.14
SKA3-202ENST00000314759 SPIRE2Q8WWL2 714 aa14.16□□□□□ -0.14
SKA3-202ENST00000314759 HAUS1Q96CS2 278 aa14.16□□□□□ -0.14
SKA3-202ENST00000314759 ZNF333Q96JL9 665 aa14.16□□□□□ -0.14
SKA3-202ENST00000314759 SENP7Q9BQF6 1050 aa14.16□□□□□ -0.14
SKA3-202ENST00000314759 LNPEPQ9UIQ6 1025 aa14.16□□□□□ -0.14
SKA3-202ENST00000314759 CLRN2A0PK11 232 aa14.16□□□□□ -0.14
SKA3-202ENST00000314759 WDR91A4D1P6 747 aa14.16□□□□□ -0.14
SKA3-202ENST00000314759 RTN3O95197 1032 aaPredicted RBP14.16□□□□□ -0.14
SKA3-202ENST00000314759 MARK3P27448 753 aa14.16□□□□□ -0.14
SKA3-202ENST00000314759 GNA15P30679 374 aa14.16□□□□□ -0.14
SKA3-202ENST00000314759 CETN2P41208 172 aa14.16□□□□□ -0.14
SKA3-202ENST00000314759 EFTUD2Q15029 972 aaKnown RBP eCLIP14.16□□□□□ -0.141e-8■■■■■ 36.9
SKA3-202ENST00000314759 OASLQ15646 514 aaKnown RBP14.16□□□□□ -0.14
SKA3-202ENST00000314759 ZACNQ401N2 412 aa14.16□□□□□ -0.14
SKA3-202ENST00000314759 TDRD10Q5VZ19 366 aaKnown RBP14.16□□□□□ -0.14
SKA3-202ENST00000314759 CENPUQ71F23 418 aa14.16□□□□□ -0.14
SKA3-202ENST00000314759 TMEM121Q9BTD3 319 aa14.16□□□□□ -0.14
SKA3-202ENST00000314759 C12orf65Q9H3J6 166 aaKnown RBP14.16□□□□□ -0.14
SKA3-202ENST00000314759 APOBEC3GQ9HC16 384 aaKnown RBP14.16□□□□□ -0.14
SKA3-202ENST00000314759 WDR35Q9P2L0 1181 aa14.16□□□□□ -0.14
SKA3-202ENST00000314759 DCTN4Q9UJW0 460 aa14.16□□□□□ -0.14
SKA3-202ENST00000314759 SCINQ9Y6U3 715 aa14.16□□□□□ -0.14
SKA3-202ENST00000314759 SRCAPQ6ZRS2 3230 aa14.16□□□□□ -0.14
SKA3-202ENST00000314759 COL2A1P02458 1487 aaPredicted RBP14.16□□□□□ -0.14
SKA3-202ENST00000314759 WDR64B1ANS9 1081 aa14.15□□□□□ -0.14
SKA3-202ENST00000314759 IRF6O14896 467 aa14.15□□□□□ -0.14
SKA3-202ENST00000314759 NVLO15381 856 aaKnown RBP14.15□□□□□ -0.14
SKA3-202ENST00000314759 C4BPAP04003 597 aaKnown RBP14.15□□□□□ -0.14
SKA3-202ENST00000314759 KRT1P04264 644 aa14.15□□□□□ -0.14
SKA3-202ENST00000314759 TNNI1P19237 187 aa14.15□□□□□ -0.14
SKA3-202ENST00000314759 GARTP22102 1010 aa14.15□□□□□ -0.14
SKA3-202ENST00000314759 GEMIN4P57678 1058 aaKnown RBP14.15□□□□□ -0.14
SKA3-202ENST00000314759 CLDN10P78369 228 aa14.15□□□□□ -0.14
SKA3-202ENST00000314759 GAD2Q05329 585 aa14.15□□□□□ -0.14
SKA3-202ENST00000314759 OVGP1Q12889 678 aa14.15□□□□□ -0.14
SKA3-202ENST00000314759 TSNAXIP1Q2TAA8 658 aa14.15□□□□□ -0.14
SKA3-202ENST00000314759 CMPK2Q5EBM0 449 aa14.15□□□□□ -0.14
SKA3-202ENST00000314759 EFHC2Q5JST6 749 aa14.15□□□□□ -0.14
SKA3-202ENST00000314759 TXNRD3NBQ6F5E7 133 aa14.15□□□□□ -0.14
SKA3-202ENST00000314759 TRIM72Q6ZMU5 477 aa14.15□□□□□ -0.14
SKA3-202ENST00000314759 TAS1R3Q7RTX0 852 aa14.15□□□□□ -0.14
SKA3-202ENST00000314759 RFWD2Q8NHY2 731 aa14.15□□□□□ -0.14
SKA3-202ENST00000314759 SYTL5Q8TDW5 730 aaPredicted RBP14.15□□□□□ -0.14
SKA3-202ENST00000314759 SH3TC2Q8TF17 1288 aa14.15□□□□□ -0.14
SKA3-202ENST00000314759 ACSF2Q96CM8 615 aaPredicted RBP14.15□□□□□ -0.14
SKA3-202ENST00000314759 RBM41Q96IZ5 413 aaKnown RBP14.15□□□□□ -0.14
SKA3-202ENST00000314759 TAAR1Q96RJ0 339 aa14.15□□□□□ -0.14
SKA3-202ENST00000314759 SAR1AQ9NR31 198 aa14.15□□□□□ -0.14
SKA3-202ENST00000314759 PARVAQ9NVD7 372 aa14.15□□□□□ -0.14
SKA3-202ENST00000314759 ZNF219Q9P2Y4 722 aaPredicted RBP14.15□□□□□ -0.14
SKA3-202ENST00000314759 RABGEF1Q9UJ41 708 aa14.15□□□□□ -0.14
SKA3-202ENST00000314759 DRG1Q9Y295 367 aaKnown RBP14.15□□□□□ -0.14
SKA3-202ENST00000314759 PCDHB4Q9Y5E5 795 aa14.15□□□□□ -0.14
SKA3-202ENST00000314759 CLUHO75153 1309 aa14.15□□□□□ -0.14
SKA3-202ENST00000314759 PTPRJQ12913 1337 aa14.15□□□□□ -0.14
SKA3-202ENST00000314759 ZWINTO95229 277 aa14.15□□□□□ -0.14
SKA3-202ENST00000314759 VNN1O95497 513 aa14.15□□□□□ -0.14
SKA3-202ENST00000314759 IFNB1P01574 187 aa14.15□□□□□ -0.14
SKA3-202ENST00000314759 PIK3CAP42336 1068 aa14.15□□□□□ -0.14
SKA3-202ENST00000314759 ZNF252P-AS1Q0IIN9 211 aa14.15□□□□□ -0.14
SKA3-202ENST00000314759 FYB2Q5VWT5 728 aa14.15□□□□□ -0.14
SKA3-202ENST00000314759 C4orf50Q6ZRC1 276 aa14.15□□□□□ -0.14
SKA3-202ENST00000314759 CDAN1Q8IWY9 1227 aa14.15□□□□□ -0.14
SKA3-202ENST00000314759 CPXCR1Q8N123 301 aa14.15□□□□□ -0.14
SKA3-202ENST00000314759 SAMD3Q8N6K7 520 aa14.15□□□□□ -0.14
SKA3-202ENST00000314759 BICD1Q96G01 975 aa14.15□□□□□ -0.14
SKA3-202ENST00000314759 CADM1Q9BY67 442 aaKnown RBP14.15□□□□□ -0.14
SKA3-202ENST00000314759 DCLRE1BQ9H816 532 aa14.15□□□□□ -0.14
SKA3-202ENST00000314759 HOMER2Q9NSB8 354 aa14.15□□□□□ -0.14
SKA3-202ENST00000314759 IP6K2Q9UHH9 426 aa14.15□□□□□ -0.14
SKA3-202ENST00000314759 RPL26L1Q9UNX3 145 aaKnown RBP14.15□□□□□ -0.14
SKA3-202ENST00000314759 SHOC2Q9UQ13 582 aa14.15□□□□□ -0.14
SKA3-202ENST00000314759 F8VP50 259 aa14.14□□□□□ -0.15
SKA3-202ENST00000314759 SMAPO00193 183 aa14.14□□□□□ -0.15
SKA3-202ENST00000314759 ABLIM1O14639 778 aa14.14□□□□□ -0.15
SKA3-202ENST00000314759 MYCLP12524 364 aaPredicted RBP14.14□□□□□ -0.15
SKA3-202ENST00000314759 SSTR1P30872 391 aa14.14□□□□□ -0.15
SKA3-202ENST00000314759 JAK3P52333 1124 aa14.14□□□□□ -0.15
SKA3-202ENST00000314759 VCPP55072 806 aaKnown RBP14.14□□□□□ -0.15
SKA3-202ENST00000314759 POLE2P56282 527 aa14.14□□□□□ -0.15
SKA3-202ENST00000314759 C1QBPQ07021 282 aaKnown RBP14.14□□□□□ -0.15
SKA3-202ENST00000314759 CUL2Q13617 745 aa14.14□□□□□ -0.15
SKA3-202ENST00000314759 TFDP1Q14186 410 aa14.14□□□□□ -0.15
SKA3-202ENST00000314759 SPOCD1Q6ZMY3 1216 aa14.14□□□□□ -0.15
SKA3-202ENST00000314759 FBXO41Q8TF61 875 aa14.14□□□□□ -0.15
SKA3-202ENST00000314759 CEP170P1Q96L14 293 aa14.14□□□□□ -0.15
Retrieved 100 of 20,778 RNA–protein pairs in 36.8 ms