RNA–Protein interactions for RNA: ENST00000314355.6

CKS2-201, Transcript of CDC28 protein kinase regulatory subunit 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CKS2, Length 613 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CKS2-201ENST00000314355 HEPACAM2A8MVW5 462 aa13.64□□□□□ -0.23
CKS2-201ENST00000314355 CLSTN1O94985 981 aa13.64□□□□□ -0.23
CKS2-201ENST00000314355 CSH1P0DML2 217 aa13.64□□□□□ -0.23
CKS2-201ENST00000314355 CSH2P0DML3 217 aa13.64□□□□□ -0.23
CKS2-201ENST00000314355 HAPLN1P10915 354 aaPredicted RBP13.64□□□□□ -0.23
CKS2-201ENST00000314355 CD72P21854 359 aa13.64□□□□□ -0.23
CKS2-201ENST00000314355 VIPR2P41587 438 aa13.64□□□□□ -0.23
CKS2-201ENST00000314355 SHC4Q6S5L8 630 aa13.64□□□□□ -0.23
CKS2-201ENST00000314355 SPATA2LQ8IUW3 424 aaPredicted RBP13.64□□□□□ -0.23
CKS2-201ENST00000314355 ARID3BQ8IVW6 561 aaPredicted RBP13.64□□□□□ -0.23
CKS2-201ENST00000314355 TOP6BLQ8N6T0 577 aa13.64□□□□□ -0.23
CKS2-201ENST00000314355 C1orf127Q8N9H9 656 aa13.64□□□□□ -0.23
CKS2-201ENST00000314355 RDH13Q8NBN7 331 aa13.64□□□□□ -0.23
CKS2-201ENST00000314355 OR10T2Q8NGX3 314 aa13.64□□□□□ -0.23
CKS2-201ENST00000314355 SHKBP1Q8TBC3 707 aa13.64□□□□□ -0.23
CKS2-201ENST00000314355 ZNF507Q8TCN5 953 aa13.64□□□□□ -0.23
CKS2-201ENST00000314355 GIPC2Q8TF65 315 aa13.64□□□□□ -0.23
CKS2-201ENST00000314355 FAM3CQ92520 227 aa13.64□□□□□ -0.23
CKS2-201ENST00000314355 MSANTD3Q96H12 275 aa13.64□□□□□ -0.23
CKS2-201ENST00000314355 ZSWIM3Q96MP5 696 aa13.64□□□□□ -0.23
CKS2-201ENST00000314355 TMEM209Q96SK2 561 aa13.64□□□□□ -0.23
CKS2-201ENST00000314355 HINFPQ9BQA5 517 aa13.64□□□□□ -0.23
CKS2-201ENST00000314355 DDX23Q9BUQ8 820 aaKnown RBP13.64□□□□□ -0.23
CKS2-201ENST00000314355 IKZF4Q9H2S9 585 aa13.64□□□□□ -0.23
CKS2-201ENST00000314355 TASP1Q9H6P5 420 aa13.64□□□□□ -0.23
CKS2-201ENST00000314355 C8orf33Q9H7E9 229 aaPredicted RBP13.64□□□□□ -0.23
CKS2-201ENST00000314355 HSPBP1Q9NZL4 362 aa13.64□□□□□ -0.23
CKS2-201ENST00000314355 PCDHA7Q9UN72 937 aa13.64□□□□□ -0.23
CKS2-201ENST00000314355 ATP6V1DQ9Y5K8 247 aa13.64□□□□□ -0.23
CKS2-201ENST00000314355 UBE4BO95155 1302 aa13.64□□□□□ -0.23
CKS2-201ENST00000314355 PDCD11Q14690 1871 aaKnown RBP13.63□□□□□ -0.23
CKS2-201ENST00000314355 PRR23AA6NEV1 266 aa13.63□□□□□ -0.23
CKS2-201ENST00000314355 CHADO15335 359 aa13.63□□□□□ -0.23
CKS2-201ENST00000314355 KIF20AO95235 890 aa13.63□□□□□ -0.23
CKS2-201ENST00000314355 LMNAP02545 664 aaKnown RBP13.63□□□□□ -0.23
CKS2-201ENST00000314355 AVPR1AP37288 418 aa13.63□□□□□ -0.23
CKS2-201ENST00000314355 AFMP43652 599 aa13.63□□□□□ -0.23
CKS2-201ENST00000314355 RPS9P46781 194 aaKnown RBP13.63□□□□□ -0.23
CKS2-201ENST00000314355 MLLT6P55198 1093 aaPredicted RBP13.63□□□□□ -0.23
CKS2-201ENST00000314355 PLCB2Q00722 1185 aa13.63□□□□□ -0.23
CKS2-201ENST00000314355 TRPC3Q13507 836 aa13.63□□□□□ -0.23
CKS2-201ENST00000314355 MAPRE1Q15691 268 aaKnown RBP13.63□□□□□ -0.23
CKS2-201ENST00000314355 E2F4Q16254 413 aa13.63□□□□□ -0.23
CKS2-201ENST00000314355 ARHGAP29Q52LW3 1261 aa13.63□□□□□ -0.23
CKS2-201ENST00000314355 CNNM4Q6P4Q7 775 aa13.63□□□□□ -0.23
CKS2-201ENST00000314355 VITQ6UXI7 678 aa13.63□□□□□ -0.23
CKS2-201ENST00000314355 C4orf50Q6ZRC1 276 aa13.63□□□□□ -0.23
CKS2-201ENST00000314355 WDR49Q8IV35 697 aa13.63□□□□□ -0.23
CKS2-201ENST00000314355 FSIP1Q8NA03 581 aa13.63□□□□□ -0.23
CKS2-201ENST00000314355 XXYLT1Q8NBI6 393 aa13.63□□□□□ -0.23
CKS2-201ENST00000314355 GOLGA5Q8TBA6 731 aa13.63□□□□□ -0.23
CKS2-201ENST00000314355 ATRIPQ8WXE1 791 aa13.63□□□□□ -0.23
CKS2-201ENST00000314355 MRPS31Q92665 395 aaKnown RBP13.63□□□□□ -0.23
CKS2-201ENST00000314355 EXOC4Q96A65 974 aa13.63□□□□□ -0.23
CKS2-201ENST00000314355 CCDC34Q96HJ3 373 aa13.63□□□□□ -0.23
CKS2-201ENST00000314355 HPDLQ96IR7 371 aa13.63□□□□□ -0.23
CKS2-201ENST00000314355 MMS19Q96T76 1030 aa13.63□□□□□ -0.23
CKS2-201ENST00000314355 DNAJC25Q9H1X3 360 aa13.63□□□□□ -0.23
CKS2-201ENST00000314355 CRISPLD1Q9H336 500 aa13.63□□□□□ -0.23
CKS2-201ENST00000314355 INTS13Q9NVM9 706 aa13.63□□□□□ -0.23
CKS2-201ENST00000314355 GDAP2Q9NXN4 497 aa13.63□□□□□ -0.23
CKS2-201ENST00000314355 OBP2AQ9NY56 170 aa13.63□□□□□ -0.23
CKS2-201ENST00000314355 FBXO4Q9UKT5 387 aa13.63□□□□□ -0.23
CKS2-201ENST00000314355 NDRG2Q9UN36 371 aaKnown RBP13.63□□□□□ -0.23
CKS2-201ENST00000314355 MAGED2Q9UNF1 606 aaPredicted RBP13.63□□□□□ -0.23
CKS2-201ENST00000314355 CLIC2O15247 247 aa13.62□□□□□ -0.23
CKS2-201ENST00000314355 KINO60870 393 aaKnown RBP13.62□□□□□ -0.23
CKS2-201ENST00000314355 PHACTR2O75167 634 aa13.62□□□□□ -0.23
CKS2-201ENST00000314355 MOSPD3O75425 235 aa13.62□□□□□ -0.23
CKS2-201ENST00000314355 SOAT2O75908 522 aa13.62□□□□□ -0.23
CKS2-201ENST00000314355 SP9P0CG40 484 aa13.62□□□□□ -0.23
CKS2-201ENST00000314355 DLATP10515 647 aaKnown RBP13.62□□□□□ -0.23
CKS2-201ENST00000314355 DDX6P26196 483 aaKnown RBP eCLIP13.62□□□□□ -0.231e-8■■■□□ 16.8
CKS2-201ENST00000314355 KRT85P78386 507 aa13.62□□□□□ -0.23
CKS2-201ENST00000314355 AMPD2Q01433 879 aa13.62□□□□□ -0.23
CKS2-201ENST00000314355 CSTF1Q05048 431 aaKnown RBP13.62□□□□□ -0.23
CKS2-201ENST00000314355 PSMD2Q13200 908 aa13.62□□□□□ -0.23
CKS2-201ENST00000314355 SNRNP35Q16560 246 aaKnown RBP13.62□□□□□ -0.23
CKS2-201ENST00000314355 ZNF528Q3MIS6 628 aa13.62□□□□□ -0.23
CKS2-201ENST00000314355 CC2D1AQ6P1N0 951 aaPredicted RBP13.62□□□□□ -0.23
CKS2-201ENST00000314355 TMC8Q8IU68 726 aa13.62□□□□□ -0.23
CKS2-201ENST00000314355 NELFCDQ8IXH7 590 aa13.62□□□□□ -0.23
CKS2-201ENST00000314355 PDCL2Q8N4E4 241 aa13.62□□□□□ -0.23
CKS2-201ENST00000314355 CELF5Q8N6W0 485 aaKnown RBP13.62□□□□□ -0.23
CKS2-201ENST00000314355 SECISBP2LQ93073 1101 aaKnown RBP13.62□□□□□ -0.23
CKS2-201ENST00000314355 LPIN3Q9BQK8 851 aa13.62□□□□□ -0.23
CKS2-201ENST00000314355 IER2Q9BTL4 223 aa13.62□□□□□ -0.23
CKS2-201ENST00000314355 PI4K2AQ9BTU6 479 aa13.62□□□□□ -0.23
CKS2-201ENST00000314355 LRRC3Q9BY71 257 aa13.62□□□□□ -0.23
CKS2-201ENST00000314355 MTMR12Q9C0I1 747 aa13.62□□□□□ -0.23
CKS2-201ENST00000314355 BLZF1Q9H2G9 400 aa13.62□□□□□ -0.23
CKS2-201ENST00000314355 EHD2Q9NZN4 543 aa13.62□□□□□ -0.23
CKS2-201ENST00000314355 DLGAP2Q9P1A6 1054 aa13.62□□□□□ -0.23
CKS2-201ENST00000314355 MAGEC2Q9UBF1 373 aaPredicted RBP13.62□□□□□ -0.23
CKS2-201ENST00000314355 USP25Q9UHP3 1055 aa13.62□□□□□ -0.23
CKS2-201ENST00000314355 RCOR1Q9UKL0 485 aa13.62□□□□□ -0.23
CKS2-201ENST00000314355 PIAS3Q9Y6X2 628 aa13.62□□□□□ -0.23
CKS2-201ENST00000314355 TRIOO75962 3097 aa13.61□□□□□ -0.23
CKS2-201ENST00000314355 SOBPA7XYQ1 873 aa13.61□□□□□ -0.23
CKS2-201ENST00000314355 EXOC3O60645 756 aa13.61□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 20.1 ms