RNA–Protein interactions for RNA: ENST00000312989.11

PPP1CA-201, Transcript of protein phosphatase 1 catalytic subunit alpha, humanhuman

TSL 1 (best) BASIC

Gene PPP1CA, Length 1,389 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPP1CA-201ENST00000312989 MCCD1P59942 119 aaPredicted RBP15.69■□□□□ 0.1
PPP1CA-201ENST00000312989 GPC5P78333 572 aa15.69■□□□□ 0.1
PPP1CA-201ENST00000312989 INTS6LQ5JSJ4 861 aaKnown RBP15.69■□□□□ 0.1
PPP1CA-201ENST00000312989 FAM78AQ5JUQ0 283 aa15.69■□□□□ 0.1
PPP1CA-201ENST00000312989 TANGO2Q6ICL3 276 aa15.69■□□□□ 0.1
PPP1CA-201ENST00000312989 PDZD4Q76G19 769 aaPredicted RBP15.69■□□□□ 0.1
PPP1CA-201ENST00000312989 TMEM86AQ8N2M4 240 aa15.69■□□□□ 0.1
PPP1CA-201ENST00000312989 SPATA18Q8TC71 538 aa15.69■□□□□ 0.1
PPP1CA-201ENST00000312989 PARD3BQ8TEW8 1205 aa15.69■□□□□ 0.1
PPP1CA-201ENST00000312989 CCDC127Q96BQ5 260 aa15.69■□□□□ 0.1
PPP1CA-201ENST00000312989 RSPRY1Q96DX4 576 aa15.69■□□□□ 0.1
PPP1CA-201ENST00000312989 ANKRD36BP1Q96IX9 119 aa15.69■□□□□ 0.1
PPP1CA-201ENST00000312989 ASB16Q96NS5 453 aa15.69■□□□□ 0.1
PPP1CA-201ENST00000312989 LPIN3Q9BQK8 851 aa15.69■□□□□ 0.1
PPP1CA-201ENST00000312989 ACBD6Q9BR61 282 aa15.69■□□□□ 0.1
PPP1CA-201ENST00000312989 LRRIQ3A6PVS8 624 aaPredicted RBP15.68■□□□□ 0.1
PPP1CA-201ENST00000312989 STAU1O95793 577 aaKnown RBP15.68■□□□□ 0.1
PPP1CA-201ENST00000312989 DLATP10515 647 aaKnown RBP15.68■□□□□ 0.1
PPP1CA-201ENST00000312989 HAPLN1P10915 354 aaPredicted RBP15.68■□□□□ 0.1
PPP1CA-201ENST00000312989 ACAT1P24752 427 aaKnown RBP15.68■□□□□ 0.1
PPP1CA-201ENST00000312989 GPR15P49685 360 aa15.68■□□□□ 0.1
PPP1CA-201ENST00000312989 DLG4P78352 724 aa15.68■□□□□ 0.1
PPP1CA-201ENST00000312989 TEAD2Q15562 447 aa15.68■□□□□ 0.1
PPP1CA-201ENST00000312989 NFIL3Q16649 462 aa15.68■□□□□ 0.1
PPP1CA-201ENST00000312989 STXBP5Q5T5C0 1151 aa15.68■□□□□ 0.1
PPP1CA-201ENST00000312989 TDRD10Q5VZ19 366 aaKnown RBP15.68■□□□□ 0.1
PPP1CA-201ENST00000312989 MTSS1LQ765P7 747 aa15.68■□□□□ 0.1
PPP1CA-201ENST00000312989 DPH6Q7L8W6 267 aa15.68■□□□□ 0.1
PPP1CA-201ENST00000312989 DNAJB7Q7Z6W7 309 aaPredicted RBP15.68■□□□□ 0.1
PPP1CA-201ENST00000312989 TMEM150AQ86TG1 271 aa15.68■□□□□ 0.1
PPP1CA-201ENST00000312989 METTL23Q86XA0 190 aa15.68■□□□□ 0.1
PPP1CA-201ENST00000312989 SUGP1Q8IWZ8 645 aaKnown RBP15.68■□□□□ 0.1
PPP1CA-201ENST00000312989 ADGRF2Q8IZF7 708 aa15.68■□□□□ 0.1
PPP1CA-201ENST00000312989 SIX5Q8N196 739 aa15.68■□□□□ 0.1
PPP1CA-201ENST00000312989 LEMD2Q8NC56 503 aa15.68■□□□□ 0.1
PPP1CA-201ENST00000312989 SPATA20Q8TB22 786 aa15.68■□□□□ 0.1
PPP1CA-201ENST00000312989 GOLGA5Q8TBA6 731 aa15.68■□□□□ 0.1
PPP1CA-201ENST00000312989 HPDLQ96IR7 371 aa15.68■□□□□ 0.1
PPP1CA-201ENST00000312989 ZNF512Q96ME7 567 aaPredicted RBP15.68■□□□□ 0.1
PPP1CA-201ENST00000312989 TRPV4Q9HBA0 871 aa15.68■□□□□ 0.1
PPP1CA-201ENST00000312989 ASAH2Q9NR71 780 aa15.68■□□□□ 0.1
PPP1CA-201ENST00000312989 DDX43Q9NXZ2 648 aaKnown RBP15.68■□□□□ 0.1
PPP1CA-201ENST00000312989 ZNF197O14709 1029 aa15.67■□□□□ 0.1
PPP1CA-201ENST00000312989 EXOC3O60645 756 aa15.67■□□□□ 0.1
PPP1CA-201ENST00000312989 VNN1O95497 513 aa15.67■□□□□ 0.1
PPP1CA-201ENST00000312989 TNNC2P02585 160 aa15.67■□□□□ 0.1
PPP1CA-201ENST00000312989 C4BPAP04003 597 aaKnown RBP15.67■□□□□ 0.1
PPP1CA-201ENST00000312989 NR3C1P04150 777 aa15.67■□□□□ 0.1
PPP1CA-201ENST00000312989 MYL4P12829 197 aa15.67■□□□□ 0.1
PPP1CA-201ENST00000312989 HMGA1P17096 107 aaKnown RBP15.67■□□□□ 0.1
PPP1CA-201ENST00000312989 AOC1P19801 751 aa15.67■□□□□ 0.1
PPP1CA-201ENST00000312989 LMO2P25791 158 aa15.67■□□□□ 0.1
PPP1CA-201ENST00000312989 SMARCB1Q12824 385 aa15.67■□□□□ 0.1
PPP1CA-201ENST00000312989 PLD1Q13393 1074 aa15.67■□□□□ 0.1
PPP1CA-201ENST00000312989 IQCEQ6IPM2 695 aa15.67■□□□□ 0.1
PPP1CA-201ENST00000312989 FAM171BQ6P995 826 aa15.67■□□□□ 0.1
PPP1CA-201ENST00000312989 THEM5Q8N1Q8 247 aa15.67■□□□□ 0.1
PPP1CA-201ENST00000312989 GUF1Q8N442 669 aaKnown RBP15.67■□□□□ 0.1
PPP1CA-201ENST00000312989 SPPL2BQ8TCT7 592 aa15.67■□□□□ 0.1
PPP1CA-201ENST00000312989 C2orf15Q8WU43 125 aaKnown RBP15.67■□□□□ 0.1
PPP1CA-201ENST00000312989 VRTNQ9H8Y1 702 aa15.67■□□□□ 0.1
PPP1CA-201ENST00000312989 CRTAC1Q9NQ79 661 aa15.67■□□□□ 0.1
PPP1CA-201ENST00000312989 ASB3Q9Y575 518 aa15.67■□□□□ 0.1
PPP1CA-201ENST00000312989 A0A1W2PRU2 124 aa15.66■□□□□ 0.1
PPP1CA-201ENST00000312989 MYBPHLA2RUH7 354 aa15.66■□□□□ 0.1
PPP1CA-201ENST00000312989 ARNTLO00327 626 aa15.66■□□□□ 0.1
PPP1CA-201ENST00000312989 HUS1O60921 280 aa15.66■□□□□ 0.1
PPP1CA-201ENST00000312989 ATP2C2O75185 946 aa15.66■□□□□ 0.1
PPP1CA-201ENST00000312989 PRPF40AO75400 957 aaKnown RBP15.66■□□□□ 0.1
PPP1CA-201ENST00000312989 WARSP23381 471 aaKnown RBP15.66■□□□□ 0.1
PPP1CA-201ENST00000312989 CLCN5P51795 746 aa15.66■□□□□ 0.1
PPP1CA-201ENST00000312989 EPHB3P54753 998 aa15.66■□□□□ 0.1
PPP1CA-201ENST00000312989 MYL6P60660 151 aa15.66■□□□□ 0.1
PPP1CA-201ENST00000312989 NHLH1Q02575 133 aa15.66■□□□□ 0.1
PPP1CA-201ENST00000312989 PNOCQ13519 176 aa15.66■□□□□ 0.1
PPP1CA-201ENST00000312989 MGAT5BQ3V5L5 792 aa15.66■□□□□ 0.1
PPP1CA-201ENST00000312989 CYP4A22Q5TCH4 519 aa15.66■□□□□ 0.1
PPP1CA-201ENST00000312989 ASTLQ6HA08 431 aaPredicted RBP15.66■□□□□ 0.1
PPP1CA-201ENST00000312989 SMYD4Q8IYR2 804 aaPredicted RBP15.66■□□□□ 0.1
PPP1CA-201ENST00000312989 STKLD1Q8NE28 680 aa15.66■□□□□ 0.1
PPP1CA-201ENST00000312989 ELSPBP1Q96BH3 223 aa15.66■□□□□ 0.1
PPP1CA-201ENST00000312989 LRRC3BQ96PB8 259 aa15.66■□□□□ 0.1
PPP1CA-201ENST00000312989 SEPT5Q99719 369 aaPredicted RBP15.66■□□□□ 0.1
PPP1CA-201ENST00000312989 MRPL45Q9BRJ2 306 aaKnown RBP15.66■□□□□ 0.1
PPP1CA-201ENST00000312989 DDX23Q9BUQ8 820 aaKnown RBP15.66■□□□□ 0.1
PPP1CA-201ENST00000312989 ARHGEF3Q9NR81 526 aa15.66■□□□□ 0.1
PPP1CA-201ENST00000312989 ABI2Q9NYB9 513 aaPredicted RBP15.66■□□□□ 0.1
PPP1CA-201ENST00000312989 DLGAP2Q9P1A6 1054 aa15.66■□□□□ 0.1
PPP1CA-201ENST00000312989 GTF3C4Q9UKN8 822 aa15.66■□□□□ 0.1
PPP1CA-201ENST00000312989 MAPK8IP1Q9UQF2 711 aa15.66■□□□□ 0.1
PPP1CA-201ENST00000312989 TCHHQ07283 1943 aa15.66■□□□□ 0.1
PPP1CA-201ENST00000312989 COL4A2P08572 1712 aa15.66■□□□□ 0.1
PPP1CA-201ENST00000312989 USP34Q70CQ2 3546 aa15.66■□□□□ 0.1
PPP1CA-201ENST00000312989 TACC1O75410 805 aa15.65■□□□□ 0.1
PPP1CA-201ENST00000312989 TADA3O75528 432 aa15.65■□□□□ 0.1
PPP1CA-201ENST00000312989 AKAP3O75969 853 aa15.65■□□□□ 0.1
PPP1CA-201ENST00000312989 TNNI1P19237 187 aa15.65■□□□□ 0.1
PPP1CA-201ENST00000312989 ALDH1A3P47895 512 aa15.65■□□□□ 0.1
PPP1CA-201ENST00000312989 TUFMP49411 452 aaKnown RBP15.65■□□□□ 0.1
PPP1CA-201ENST00000312989 CFAP221Q4G0U5 840 aa15.65■□□□□ 0.1
Retrieved 100 of 20,778 RNA–protein pairs in 29 ms