RNA–Protein interactions for RNA: ENST00000310546.2

SPSB4-201, Transcript of splA/ryanodine receptor domain and SOCS box containing 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SPSB4, Length 2,908 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPSB4-201ENST00000310546 RAP1GDS1P52306 607 aa18.97■□□□□ 0.63
SPSB4-201ENST00000310546 NOP14P78316 857 aaKnown RBP18.97■□□□□ 0.63
SPSB4-201ENST00000310546 BMT2Q1RMZ1 405 aa18.97■□□□□ 0.63
SPSB4-201ENST00000310546 LPCAT4Q643R3 524 aa18.97■□□□□ 0.63
SPSB4-201ENST00000310546 NOP9Q86U38 636 aaKnown RBP18.97■□□□□ 0.63
SPSB4-201ENST00000310546 MAP7D3Q8IWC1 876 aa18.97■□□□□ 0.63
SPSB4-201ENST00000310546 ULK2Q8IYT8 1036 aa18.97■□□□□ 0.63
SPSB4-201ENST00000310546 ZCCHC9Q8N567 271 aaKnown RBP18.97■□□□□ 0.63
SPSB4-201ENST00000310546 PYDC1Q8WXC3 89 aa18.97■□□□□ 0.63
SPSB4-201ENST00000310546 OXNAD1Q96HP4 312 aaPredicted RBP18.97■□□□□ 0.63
SPSB4-201ENST00000310546 MKNK1Q9BUB5 465 aa18.97■□□□□ 0.63
SPSB4-201ENST00000310546 SLC7A8Q9UHI5 535 aa18.97■□□□□ 0.63
SPSB4-201ENST00000310546 ANAPC7Q9UJX3 599 aa18.97■□□□□ 0.63
SPSB4-201ENST00000310546 MTO1Q9Y2Z2 717 aaKnown RBP18.97■□□□□ 0.63
SPSB4-201ENST00000310546 PPP1R11O60927 126 aaPredicted RBP18.96■□□□□ 0.63
SPSB4-201ENST00000310546 DUS1LQ6P1R4 473 aaKnown RBP18.96■□□□□ 0.63
SPSB4-201ENST00000310546 KCTD1Q719H9 257 aa18.96■□□□□ 0.63
SPSB4-201ENST00000310546 SLC47A2Q86VL8 602 aa18.96■□□□□ 0.63
SPSB4-201ENST00000310546 TMPRSS6Q8IU80 811 aa18.96■□□□□ 0.63
SPSB4-201ENST00000310546 BBOF1Q8ND07 529 aa18.96■□□□□ 0.63
SPSB4-201ENST00000310546 MTBPQ96DY7 904 aa18.96■□□□□ 0.63
SPSB4-201ENST00000310546 FAM237BA0A1B0GVD1 139 aa18.96■□□□□ 0.63
SPSB4-201ENST00000310546 hCG_1984214I3L0E3 225 aa18.96■□□□□ 0.63
SPSB4-201ENST00000310546 MAGEB3O15480 346 aa18.96■□□□□ 0.63
SPSB4-201ENST00000310546 CYP26A1O43174 497 aa18.96■□□□□ 0.63
SPSB4-201ENST00000310546 RGS2P41220 211 aa18.96■□□□□ 0.63
SPSB4-201ENST00000310546 GALK1P51570 392 aa18.96■□□□□ 0.63
SPSB4-201ENST00000310546 ARL4CP56559 192 aa18.96■□□□□ 0.63
SPSB4-201ENST00000310546 ACTR3P61158 418 aa18.96■□□□□ 0.63
SPSB4-201ENST00000310546 DLG1Q12959 904 aa18.96■□□□□ 0.63
SPSB4-201ENST00000310546 PDIA2Q13087 525 aaKnown RBP18.96■□□□□ 0.63
SPSB4-201ENST00000310546 MTMR2Q13614 643 aa18.96■□□□□ 0.63
SPSB4-201ENST00000310546 TRMT5Q32P41 509 aaKnown RBP18.96■□□□□ 0.63
SPSB4-201ENST00000310546 PRR16Q569H4 304 aa18.96■□□□□ 0.63
SPSB4-201ENST00000310546 SFT2D3Q587I9 215 aa18.96■□□□□ 0.63
SPSB4-201ENST00000310546 TTBK2Q6IQ55 1244 aa18.96■□□□□ 0.63
SPSB4-201ENST00000310546 RNF168Q8IYW5 571 aaPredicted RBP18.96■□□□□ 0.63
SPSB4-201ENST00000310546 ZNF713Q8N859 430 aaPredicted RBP18.96■□□□□ 0.63
SPSB4-201ENST00000310546 CEP70Q8NHQ1 597 aa18.96■□□□□ 0.63
SPSB4-201ENST00000310546 NEDD1Q8NHV4 660 aa18.96■□□□□ 0.63
SPSB4-201ENST00000310546 CIDEBQ9UHD4 219 aa18.96■□□□□ 0.63
SPSB4-201ENST00000310546 SMIM31A0A1B0GVY4 71 aa18.95■□□□□ 0.62
SPSB4-201ENST00000310546 PIK3CDO00329 1044 aa18.95■□□□□ 0.62
SPSB4-201ENST00000310546 SUPT3HO75486 399 aa18.95■□□□□ 0.62
SPSB4-201ENST00000310546 SPATA31C1P0DKV0 1188 aa18.95■□□□□ 0.62
SPSB4-201ENST00000310546 SMARCA1P28370 1054 aa18.95■□□□□ 0.62
SPSB4-201ENST00000310546 GJC1P36383 396 aa18.95■□□□□ 0.62
SPSB4-201ENST00000310546 ADARP55265 1226 aaKnown RBP18.95■□□□□ 0.62
SPSB4-201ENST00000310546 MMEL1Q495T6 779 aa18.95■□□□□ 0.62
SPSB4-201ENST00000310546 STRIP1Q5VSL9 837 aa18.95■□□□□ 0.62
SPSB4-201ENST00000310546 KLC3Q6P597 504 aa18.95■□□□□ 0.62
SPSB4-201ENST00000310546 RBM44Q6ZP01 1051 aaKnown RBP18.95■□□□□ 0.62
SPSB4-201ENST00000310546 SH3BP5LQ7L8J4 393 aa18.95■□□□□ 0.62
SPSB4-201ENST00000310546 NET1Q7Z628 596 aaPredicted RBP18.95■□□□□ 0.62
SPSB4-201ENST00000310546 TDRPQ86YL5 185 aa18.95■□□□□ 0.62
SPSB4-201ENST00000310546 DGCR14Q96DF8 476 aaKnown RBP18.95■□□□□ 0.62
SPSB4-201ENST00000310546 ARHGEF4Q9NR80 690 aa18.95■□□□□ 0.62
SPSB4-201ENST00000310546 PSMC3IPQ9P2W1 217 aaPredicted RBP18.95■□□□□ 0.62
SPSB4-201ENST00000310546 BANF1O75531 89 aa18.95■□□□□ 0.62
SPSB4-201ENST00000310546 MTA2O94776 668 aa18.95■□□□□ 0.62
SPSB4-201ENST00000310546 FAM13AO94988 1023 aa18.95■□□□□ 0.62
SPSB4-201ENST00000310546 ZSCAN5DPP0CG00 497 aa18.95■□□□□ 0.62
SPSB4-201ENST00000310546 NT5C2P49902 561 aa18.95■□□□□ 0.62
SPSB4-201ENST00000310546 DLG4P78352 724 aa18.95■□□□□ 0.62
SPSB4-201ENST00000310546 MPP3Q13368 585 aa18.95■□□□□ 0.62
SPSB4-201ENST00000310546 KRT72Q14CN4 511 aa18.95■□□□□ 0.62
SPSB4-201ENST00000310546 RELL1Q8IUW5 271 aa18.95■□□□□ 0.62
SPSB4-201ENST00000310546 ANKMY2Q8IV38 441 aa18.95■□□□□ 0.62
SPSB4-201ENST00000310546 EPS8L1Q8TE68 723 aa18.95■□□□□ 0.62
SPSB4-201ENST00000310546 CATSPER2Q96P56 530 aa18.95■□□□□ 0.62
SPSB4-201ENST00000310546 FAM198AQ9UFP1 575 aa18.95■□□□□ 0.62
SPSB4-201ENST00000310546 MAGEC1O60732 1142 aa18.94■□□□□ 0.62
SPSB4-201ENST00000310546 DNAJC6O75061 913 aa18.94■□□□□ 0.62
SPSB4-201ENST00000310546 DLDP09622 509 aaKnown RBP18.94■□□□□ 0.62
SPSB4-201ENST00000310546 MAPK4P31152 587 aa18.94■□□□□ 0.62
SPSB4-201ENST00000310546 AQP4P55087 323 aa18.94■□□□□ 0.62
SPSB4-201ENST00000310546 CBX3Q13185 183 aa18.94■□□□□ 0.62
SPSB4-201ENST00000310546 MTM1Q13496 603 aa18.94■□□□□ 0.62
SPSB4-201ENST00000310546 EFTUD2Q15029 972 aaKnown RBP eCLIP18.94■□□□□ 0.62
SPSB4-201ENST00000310546 TCEAL1Q15170 157 aa18.94■□□□□ 0.62
SPSB4-201ENST00000310546 ZNF276Q8N554 614 aa18.94■□□□□ 0.62
SPSB4-201ENST00000310546 GLIS1Q8NBF1 620 aa18.94■□□□□ 0.62
SPSB4-201ENST00000310546 LZICQ8WZA0 190 aa18.94■□□□□ 0.62
SPSB4-201ENST00000310546 YIPF2Q9BWQ6 316 aa18.94■□□□□ 0.62
SPSB4-201ENST00000310546 SCN9AQ15858 1988 aa18.94■□□□□ 0.62
SPSB4-201ENST00000310546 GOLGA8SH3BPF8 625 aa18.94■□□□□ 0.62
SPSB4-201ENST00000310546 GOLGA8MH3BSY2 632 aa18.94■□□□□ 0.62
SPSB4-201ENST00000310546 ZNF189O75820 626 aaPredicted RBP18.94■□□□□ 0.62
SPSB4-201ENST00000310546 VCLP18206 1134 aa18.94■□□□□ 0.62
SPSB4-201ENST00000310546 ASPHQ12797 758 aa18.94■□□□□ 0.62
SPSB4-201ENST00000310546 ZYXQ15942 572 aaKnown RBP18.94■□□□□ 0.62
SPSB4-201ENST00000310546 TMEM259Q4ZIN3 620 aa18.94■□□□□ 0.62
SPSB4-201ENST00000310546 PDSS2Q86YH6 399 aa18.94■□□□□ 0.62
SPSB4-201ENST00000310546 ERMNQ8TAM6 284 aa18.94■□□□□ 0.62
SPSB4-201ENST00000310546 BUD23O43709 281 aaKnown RBP18.94■□□□□ 0.62
SPSB4-201ENST00000310546 CLK2P49760 499 aaKnown RBP18.94■□□□□ 0.62
SPSB4-201ENST00000310546 BFSP1Q12934 665 aa18.94■□□□□ 0.62
SPSB4-201ENST00000310546 ANKRD23Q86SG2 305 aa18.94■□□□□ 0.62
SPSB4-201ENST00000310546 TREML1Q86YW5 311 aa18.94■□□□□ 0.62
SPSB4-201ENST00000310546 ADGRF4Q8IZF3 695 aa18.94■□□□□ 0.62
Retrieved 100 of 20,778 RNA–protein pairs in 24.7 ms