RNA–Protein interactions for RNA: ENST00000310112.7

SNCB-201, Transcript of synuclein beta, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SNCB, Length 1,383 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNCB-201ENST00000310112 TCRBV5S1A1TA0A578 114 aa25.03■■□□□ 1.6
SNCB-201ENST00000310112 O00370 1275 aa25.03■■□□□ 1.6
SNCB-201ENST00000310112 PSTPIP1O43586 416 aa25.03■■□□□ 1.6
SNCB-201ENST00000310112 SKIP12755 728 aa25.03■■□□□ 1.6
SNCB-201ENST00000310112 THPOP40225 353 aa25.03■■□□□ 1.6
SNCB-201ENST00000310112 TAF6P49848 677 aa25.03■■□□□ 1.6
SNCB-201ENST00000310112 ZNF268Q14587 947 aaPredicted RBP25.03■■□□□ 1.6
SNCB-201ENST00000310112 PTPROQ16827 1216 aa25.03■■□□□ 1.6
SNCB-201ENST00000310112 LONRF2Q1L5Z9 754 aa25.03■■□□□ 1.6
SNCB-201ENST00000310112 LCLAT1Q6UWP7 414 aa25.03■■□□□ 1.6
SNCB-201ENST00000310112 FAM43BQ6ZT52 329 aaPredicted RBP25.03■■□□□ 1.6
SNCB-201ENST00000310112 MRPL10Q7Z7H8 261 aaKnown RBP25.03■■□□□ 1.6
SNCB-201ENST00000310112 EIF1ADQ8N9N8 165 aaKnown RBP25.03■■□□□ 1.6
SNCB-201ENST00000310112 CCDC26Q8TAB7 109 aa25.03■■□□□ 1.6
SNCB-201ENST00000310112 MAIP1Q8WWC4 291 aa25.03■■□□□ 1.6
SNCB-201ENST00000310112 ZNF446Q9NWS9 450 aa25.03■■□□□ 1.6
SNCB-201ENST00000310112 CHORDC1Q9UHD1 332 aaPredicted RBP25.03■■□□□ 1.6
SNCB-201ENST00000310112 NOD1Q9Y239 953 aa25.03■■□□□ 1.6
SNCB-201ENST00000310112 SNX9Q9Y5X1 595 aa25.03■■□□□ 1.6
SNCB-201ENST00000310112 TMEM191CA6NGB0 347 aa25.02■■□□□ 1.6
SNCB-201ENST00000310112 ZNF623O75123 536 aa25.02■■□□□ 1.6
SNCB-201ENST00000310112 FGGP02679 453 aa25.02■■□□□ 1.6
SNCB-201ENST00000310112 SETSIPP0DME0 302 aa25.02■■□□□ 1.6
SNCB-201ENST00000310112 SNX16P57768 344 aa25.02■■□□□ 1.6
SNCB-201ENST00000310112 NFX1Q12986 1120 aaKnown RBP25.02■■□□□ 1.6
SNCB-201ENST00000310112 GLRA4Q5JXX5 417 aa25.02■■□□□ 1.6
SNCB-201ENST00000310112 BEND6Q5SZJ8 279 aaPredicted RBP25.02■■□□□ 1.6
SNCB-201ENST00000310112 CCNI2Q6ZMN8 369 aaPredicted RBP25.02■■□□□ 1.6
SNCB-201ENST00000310112 MAATS1Q7Z4T9 603 aa25.02■■□□□ 1.6
SNCB-201ENST00000310112 IFT20Q8IY31 132 aa25.02■■□□□ 1.6
SNCB-201ENST00000310112 ARRDC4Q8NCT1 418 aa25.02■■□□□ 1.6
SNCB-201ENST00000310112 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP25.02■■□□□ 1.6
SNCB-201ENST00000310112 WNT8BQ93098 351 aa25.02■■□□□ 1.6
SNCB-201ENST00000310112 BTBD6Q96KE9 485 aa25.02■■□□□ 1.6
SNCB-201ENST00000310112 RUNDC3BQ96NL0 473 aa25.02■■□□□ 1.6
SNCB-201ENST00000310112 TWNKQ96RR1 684 aa25.02■■□□□ 1.6
SNCB-201ENST00000310112 KRT12Q99456 494 aa25.02■■□□□ 1.6
SNCB-201ENST00000310112 RNF39Q9H2S5 420 aa25.02■■□□□ 1.6
SNCB-201ENST00000310112 KPNA7A9QM74 516 aa25.01■■□□□ 1.59
SNCB-201ENST00000310112 MICAL2O94851 1124 aa25.01■■□□□ 1.59
SNCB-201ENST00000310112 INHAP05111 366 aa25.01■■□□□ 1.59
SNCB-201ENST00000310112 GABRB2P47870 512 aa25.01■■□□□ 1.59
SNCB-201ENST00000310112 PIGHQ14442 188 aaPredicted RBP25.01■■□□□ 1.59
SNCB-201ENST00000310112 PPP1R15BQ5SWA1 713 aa25.01■■□□□ 1.59
SNCB-201ENST00000310112 LIMS2Q7Z4I7 341 aa25.01■■□□□ 1.59
SNCB-201ENST00000310112 RHOT1Q8IXI2 618 aa25.01■■□□□ 1.59
SNCB-201ENST00000310112 KRT35Q92764 455 aa25.01■■□□□ 1.59
SNCB-201ENST00000310112 C18orf8Q96DM3 657 aa25.01■■□□□ 1.59
SNCB-201ENST00000310112 PPP1R10Q96QC0 940 aaKnown RBP25.01■■□□□ 1.59
SNCB-201ENST00000310112 SLTMQ9NWH9 1034 aaKnown RBP eCLIP25.01■■□□□ 1.59
SNCB-201ENST00000310112 KLK14Q9P0G3 267 aa25.01■■□□□ 1.59
SNCB-201ENST00000310112 FAM170AA1A519 330 aa25■■□□□ 1.59
SNCB-201ENST00000310112 MYCNP04198 464 aaPredicted RBP25■■□□□ 1.59
SNCB-201ENST00000310112 CTSHP09668 335 aa25■■□□□ 1.59
SNCB-201ENST00000310112 PAX3P23760 479 aa25■■□□□ 1.59
SNCB-201ENST00000310112 RNASE9P60153 205 aaKnown RBP25■■□□□ 1.59
SNCB-201ENST00000310112 PAK2Q13177 524 aa25■■□□□ 1.59
SNCB-201ENST00000310112 TRIM71Q2Q1W2 868 aaKnown RBP25■■□□□ 1.59
SNCB-201ENST00000310112 LRRC38Q5VT99 294 aa25■■□□□ 1.59
SNCB-201ENST00000310112 HDXQ7Z353 690 aa25■■□□□ 1.59
SNCB-201ENST00000310112 TOP6BLQ8N6T0 577 aa25■■□□□ 1.59
SNCB-201ENST00000310112 NIPA2Q8N8Q9 360 aa25■■□□□ 1.59
SNCB-201ENST00000310112 IPO4Q8TEX9 1081 aaKnown RBP25■■□□□ 1.59
SNCB-201ENST00000310112 FNIP1Q8TF40 1166 aa25■■□□□ 1.59
SNCB-201ENST00000310112 CXCL16Q9H2A7 254 aa25■■□□□ 1.59
SNCB-201ENST00000310112 UBN1Q9NPG3 1134 aa25■■□□□ 1.59
SNCB-201ENST00000310112 RNF216Q9NWF9 866 aaPredicted RBP25■■□□□ 1.59
SNCB-201ENST00000310112 HMGXB4Q9UGU5 601 aa25■■□□□ 1.59
SNCB-201ENST00000310112 MTUS1Q9ULD2 1270 aa25■■□□□ 1.59
SNCB-201ENST00000310112 SIGLEC16A6NMB1 481 aa24.99■■□□□ 1.59
SNCB-201ENST00000310112 M0QYV0 167 aa24.99■■□□□ 1.59
SNCB-201ENST00000310112 GRK4P32298 578 aa24.99■■□□□ 1.59
SNCB-201ENST00000310112 SSTR3P32745 418 aaPredicted RBP24.99■■□□□ 1.59
SNCB-201ENST00000310112 ARHGAP17Q68EM7 881 aa24.99■■□□□ 1.59
SNCB-201ENST00000310112 DCUN1D2Q6PH85 259 aa24.99■■□□□ 1.59
SNCB-201ENST00000310112 SLC43A3Q8NBI5 491 aa24.99■■□□□ 1.59
SNCB-201ENST00000310112 PGBD4Q96DM1 585 aa24.99■■□□□ 1.59
SNCB-201ENST00000310112 L1RE1Q9UN81 338 aa24.99■■□□□ 1.59
SNCB-201ENST00000310112 SCN1AP35498 2009 aa24.98■■□□□ 1.59
SNCB-201ENST00000310112 PTGESO14684 152 aa24.98■■□□□ 1.59
SNCB-201ENST00000310112 PPEF2O14830 753 aa24.98■■□□□ 1.59
SNCB-201ENST00000310112 GPD2P43304 727 aa24.98■■□□□ 1.59
SNCB-201ENST00000310112 DSC3Q14574 896 aa24.98■■□□□ 1.59
SNCB-201ENST00000310112 PTPN20Q4JDL3 420 aa24.98■■□□□ 1.59
SNCB-201ENST00000310112 LHX8Q68G74 356 aa24.98■■□□□ 1.59
SNCB-201ENST00000310112 CRYBG2Q8N1P7 616 aa24.98■■□□□ 1.59
SNCB-201ENST00000310112 TMEM130Q8N3G9 435 aa24.98■■□□□ 1.59
SNCB-201ENST00000310112 APPL2Q8NEU8 664 aa24.98■■□□□ 1.59
SNCB-201ENST00000310112 GDF3Q9NR23 364 aa24.98■■□□□ 1.59
SNCB-201ENST00000310112 OGFRQ9NZT2 677 aa24.98■■□□□ 1.59
SNCB-201ENST00000310112 DMGDHQ9UI17 866 aaKnown RBP24.98■■□□□ 1.59
SNCB-201ENST00000310112 PADI3Q9ULW8 664 aa24.98■■□□□ 1.59
SNCB-201ENST00000310112 A0A0U1RQG5 324 aaPredicted RBP24.97■■□□□ 1.59
SNCB-201ENST00000310112 SART1O43290 800 aaKnown RBP24.97■■□□□ 1.59
SNCB-201ENST00000310112 HUS1O60921 280 aa24.97■■□□□ 1.59
SNCB-201ENST00000310112 CETN2P41208 172 aa24.97■■□□□ 1.59
SNCB-201ENST00000310112 ACAP1Q15027 740 aa24.97■■□□□ 1.59
SNCB-201ENST00000310112 SOWAHAQ2M3V2 549 aa24.97■■□□□ 1.59
SNCB-201ENST00000310112 KATNAL2Q8IYT4 538 aa24.97■■□□□ 1.59
SNCB-201ENST00000310112 STK32AQ8WU08 396 aa24.97■■□□□ 1.59
Retrieved 100 of 20,778 RNA–protein pairs in 28.1 ms