RNA–Protein interactions for RNA: ENST00000309279.11

CHD6-201, Transcript of chromodomain helicase DNA binding protein 6, humanhuman

TSL 1 (best) BASIC

Gene CHD6, Length 1,635 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD6-201ENST00000309279 PLAGL2Q9UPG8 496 aa8.84□□□□□ -0.99
CHD6-201ENST00000309279 PAXBP1Q9Y5B6 917 aa8.84□□□□□ -0.99
CHD6-201ENST00000309279 MAGED1Q9Y5V3 778 aaPredicted RBP8.84□□□□□ -0.99
CHD6-201ENST00000309279 ZNF233A6NK53 670 aa8.83□□□□□ -1
CHD6-201ENST00000309279 C5orf67F2Z3F1 127 aa8.83□□□□□ -1
CHD6-201ENST00000309279 MAPK13O15264 365 aa8.83□□□□□ -1
CHD6-201ENST00000309279 DDHD2O94830 711 aa8.83□□□□□ -1
CHD6-201ENST00000309279 AGR2O95994 175 aa8.83□□□□□ -1
CHD6-201ENST00000309279 POMCP01189 267 aa8.83□□□□□ -1
CHD6-201ENST00000309279 NR3C1P04150 777 aa8.83□□□□□ -1
CHD6-201ENST00000309279 THP07101 528 aa8.83□□□□□ -1
CHD6-201ENST00000309279 RPL13P26373 211 aaKnown RBP8.83□□□□□ -1
CHD6-201ENST00000309279 SCNN1GP51170 649 aa8.83□□□□□ -1
CHD6-201ENST00000309279 PMS1P54277 932 aaKnown RBP8.83□□□□□ -1
CHD6-201ENST00000309279 NLRP12P59046 1061 aa8.83□□□□□ -1
CHD6-201ENST00000309279 ERVK-21P61565 698 aa8.83□□□□□ -1
CHD6-201ENST00000309279 LRRC63Q05C16 580 aa8.83□□□□□ -1
CHD6-201ENST00000309279 ZBTB6Q15916 424 aa8.83□□□□□ -1
CHD6-201ENST00000309279 PAN2Q504Q3 1202 aaKnown RBP8.83□□□□□ -1
CHD6-201ENST00000309279 ANKRD40Q6AI12 368 aa8.83□□□□□ -1
CHD6-201ENST00000309279 CAVIN1Q6NZI2 390 aaKnown RBP8.83□□□□□ -1
CHD6-201ENST00000309279 ZNF280BQ86YH2 543 aa8.83□□□□□ -1
CHD6-201ENST00000309279 ZC3H3Q8IXZ2 948 aaKnown RBP8.83□□□□□ -1
CHD6-201ENST00000309279 COLGALT2Q8IYK4 626 aa8.83□□□□□ -1
CHD6-201ENST00000309279 C17orf50Q8WW18 174 aa8.83□□□□□ -1
CHD6-201ENST00000309279 P2RX5Q93086 422 aa8.83□□□□□ -1
CHD6-201ENST00000309279 SAAL1Q96ER3 474 aa8.83□□□□□ -1
CHD6-201ENST00000309279 MFSD14AQ96MC6 490 aa8.83□□□□□ -1
CHD6-201ENST00000309279 ZMAT2Q96NC0 199 aaKnown RBP8.83□□□□□ -1
CHD6-201ENST00000309279 FAM213AQ9BRX8 229 aa8.83□□□□□ -1
CHD6-201ENST00000309279 NKX2-4Q9H2Z4 354 aa8.83□□□□□ -1
CHD6-201ENST00000309279 NRDE2Q9H7Z3 1164 aa8.83□□□□□ -1
CHD6-201ENST00000309279 RWDD3Q9Y3V2 267 aa8.83□□□□□ -1
CHD6-201ENST00000309279 GOLGA8IPA6NC78 632 aa8.83□□□□□ -1
CHD6-201ENST00000309279 GOLGA8JA6NMD2 632 aa8.83□□□□□ -1
CHD6-201ENST00000309279 LACTBL1A8MY62 500 aa8.83□□□□□ -1
CHD6-201ENST00000309279 TOR1BO14657 336 aa8.83□□□□□ -1
CHD6-201ENST00000309279 B4GALT3O60512 393 aa8.83□□□□□ -1
CHD6-201ENST00000309279 EXOC3O60645 756 aa8.83□□□□□ -1
CHD6-201ENST00000309279 IL18RAPO95256 599 aa8.83□□□□□ -1
CHD6-201ENST00000309279 NR2F2P24468 414 aa8.83□□□□□ -1
CHD6-201ENST00000309279 BMPR1AP36894 532 aa8.83□□□□□ -1
CHD6-201ENST00000309279 HSD17B7P56937 341 aa8.83□□□□□ -1
CHD6-201ENST00000309279 FKBP3Q00688 224 aaKnown RBP8.83□□□□□ -1
CHD6-201ENST00000309279 RNASELQ05823 741 aaKnown RBP8.83□□□□□ -1
CHD6-201ENST00000309279 PPP2R3AQ06190 1150 aa8.83□□□□□ -1
CHD6-201ENST00000309279 ADAM9Q13443 819 aa8.83□□□□□ -1
CHD6-201ENST00000309279 TUSC3Q13454 348 aa8.83□□□□□ -1
CHD6-201ENST00000309279 SMC1AQ14683 1233 aaKnown RBP8.83□□□□□ -1
CHD6-201ENST00000309279 SNRNP35Q16560 246 aaKnown RBP8.83□□□□□ -1
CHD6-201ENST00000309279 TUSC1Q2TAM9 212 aa8.83□□□□□ -1
CHD6-201ENST00000309279 C11orf91Q3C1V1 193 aa8.83□□□□□ -1
CHD6-201ENST00000309279 DPCR1Q3MIW9 517 aa8.83□□□□□ -1
CHD6-201ENST00000309279 PPP1R15BQ5SWA1 713 aa8.83□□□□□ -1
CHD6-201ENST00000309279 ARMC4Q5T2S8 1044 aa8.83□□□□□ -1
CHD6-201ENST00000309279 TTI2Q6NXR4 508 aa8.83□□□□□ -1
CHD6-201ENST00000309279 TAX1BP1Q86VP1 789 aa8.83□□□□□ -1
CHD6-201ENST00000309279 CBWD2Q8IUF1 395 aa8.83□□□□□ -1
CHD6-201ENST00000309279 FAM200AQ8TCP9 573 aa8.83□□□□□ -1
CHD6-201ENST00000309279 LRCH3Q96II8 777 aa8.83□□□□□ -1
CHD6-201ENST00000309279 SAMD11Q96NU1 681 aa8.83□□□□□ -1
CHD6-201ENST00000309279 TGS1Q96RS0 853 aaKnown RBP8.83□□□□□ -1
CHD6-201ENST00000309279 TMEM175Q9BSA9 504 aa8.83□□□□□ -1
CHD6-201ENST00000309279 PLVAPQ9BX97 442 aa8.83□□□□□ -1
CHD6-201ENST00000309279 RBAKQ9NYW8 714 aaPredicted RBP8.83□□□□□ -1
CHD6-201ENST00000309279 HCSTQ9UBK5 93 aa8.83□□□□□ -1
CHD6-201ENST00000309279 PCSK1NQ9UHG2 260 aa8.83□□□□□ -1
CHD6-201ENST00000309279 PNMA8BQ9ULN7 279 aaPredicted RBP8.83□□□□□ -1
CHD6-201ENST00000309279 DERAQ9Y315 318 aa8.83□□□□□ -1
CHD6-201ENST00000309279 C2CD2Q9Y426 696 aa8.83□□□□□ -1
CHD6-201ENST00000309279 TRIM49BA6NDI0 452 aa8.82□□□□□ -1
CHD6-201ENST00000309279 CCP110O43303 1012 aa8.82□□□□□ -1
CHD6-201ENST00000309279 AKR1B10O60218 316 aa8.82□□□□□ -1
CHD6-201ENST00000309279 AKAP3O75969 853 aa8.82□□□□□ -1
CHD6-201ENST00000309279 LETM1O95202 739 aaPredicted RBP8.82□□□□□ -1
CHD6-201ENST00000309279 ALDH2P05091 517 aa8.82□□□□□ -1
CHD6-201ENST00000309279 RB1P06400 928 aa8.82□□□□□ -1
CHD6-201ENST00000309279 GALTP07902 379 aa8.82□□□□□ -1
CHD6-201ENST00000309279 LAG3P18627 525 aa8.82□□□□□ -1
CHD6-201ENST00000309279 CYP3A5P20815 502 aa8.82□□□□□ -1
CHD6-201ENST00000309279 RXRGP48443 463 aa8.82□□□□□ -1
CHD6-201ENST00000309279 ALDH7A1P49419 539 aaKnown RBP8.82□□□□□ -1
CHD6-201ENST00000309279 CASP4P49662 377 aa8.82□□□□□ -1
CHD6-201ENST00000309279 FXR1P51114 621 aaKnown RBP eCLIP8.82□□□□□ -1
CHD6-201ENST00000309279 CYP2J2P51589 502 aa8.82□□□□□ -1
CHD6-201ENST00000309279 WNT7BP56706 349 aa8.82□□□□□ -1
CHD6-201ENST00000309279 BCAR1P56945 870 aa8.82□□□□□ -1
CHD6-201ENST00000309279 PFKPQ01813 784 aa8.82□□□□□ -1
CHD6-201ENST00000309279 ENPEPQ07075 957 aa8.82□□□□□ -1
CHD6-201ENST00000309279 PAK1Q13153 545 aa8.82□□□□□ -1
CHD6-201ENST00000309279 SURF1Q15526 300 aa8.82□□□□□ -1
CHD6-201ENST00000309279 EPC2Q52LR7 807 aa8.82□□□□□ -1
CHD6-201ENST00000309279 GLRA4Q5JXX5 417 aa8.82□□□□□ -1
CHD6-201ENST00000309279 SWT1Q5T5J6 900 aaKnown RBP8.82□□□□□ -1
CHD6-201ENST00000309279 KCNT2Q6UVM3 1135 aa8.82□□□□□ -1
CHD6-201ENST00000309279 SPRED2Q7Z698 418 aa8.82□□□□□ -1
CHD6-201ENST00000309279 MILR1Q7Z6M3 343 aa8.82□□□□□ -1
CHD6-201ENST00000309279 RDH13Q8NBN7 331 aa8.82□□□□□ -1
CHD6-201ENST00000309279 KCT2Q8NC54 265 aa8.82□□□□□ -1
CHD6-201ENST00000309279 NELFBQ8WX92 580 aa8.82□□□□□ -1
Retrieved 100 of 20,778 RNA–protein pairs in 35.1 ms