RNA–Protein interactions for RNA: ENST00000309246.9

TPT1-201, Transcript of tumor protein, translationally-controlled 1, humanhuman

TSL 1 (best) BASIC

Gene TPT1, Length 1,008 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPT1-201ENST00000309246 IKZF4Q9H2S9 585 aa13.18□□□□□ -0.3
TPT1-201ENST00000309246 GTSE1Q9NYZ3 720 aa13.18□□□□□ -0.3
TPT1-201ENST00000309246 CDV3Q9UKY7 258 aaKnown RBP13.18□□□□□ -0.3
TPT1-201ENST00000309246 SMC3Q9UQE7 1217 aa13.18□□□□□ -0.3
TPT1-201ENST00000309246 DERAQ9Y315 318 aa13.18□□□□□ -0.3
TPT1-201ENST00000309246 BOLA1Q9Y3E2 137 aa13.18□□□□□ -0.3
TPT1-201ENST00000309246 MYO16Q9Y6X6 1858 aa13.18□□□□□ -0.3
TPT1-201ENST00000309246 DMXL1Q9Y485 3027 aa13.17□□□□□ -0.3
TPT1-201ENST00000309246 MYBPHLA2RUH7 354 aa13.17□□□□□ -0.3
TPT1-201ENST00000309246 CYB561D2O14569 222 aa13.17□□□□□ -0.3
TPT1-201ENST00000309246 FGF19O95750 216 aa13.17□□□□□ -0.3
TPT1-201ENST00000309246 LONP1P36776 959 aaKnown RBP13.17□□□□□ -0.3
TPT1-201ENST00000309246 TAF6P49848 677 aa13.17□□□□□ -0.3
TPT1-201ENST00000309246 TNK2Q07912 1038 aa13.17□□□□□ -0.3
TPT1-201ENST00000309246 SRSF5Q13243 272 aaKnown RBP13.17□□□□□ -0.3
TPT1-201ENST00000309246 VEPH1Q14D04 833 aa13.17□□□□□ -0.3
TPT1-201ENST00000309246 PON2Q15165 354 aa13.17□□□□□ -0.3
TPT1-201ENST00000309246 ARHGAP29Q52LW3 1261 aa13.17□□□□□ -0.3
TPT1-201ENST00000309246 LARP1BQ659C4 914 aaKnown RBP13.17□□□□□ -0.3
TPT1-201ENST00000309246 HEATR6Q6AI08 1181 aaKnown RBP13.17□□□□□ -0.3
TPT1-201ENST00000309246 LAIR1Q6GTX8 287 aa13.17□□□□□ -0.3
TPT1-201ENST00000309246 RALGPS2Q86X27 583 aaPredicted RBP13.17□□□□□ -0.3
TPT1-201ENST00000309246 SFR1Q86XK3 245 aa13.17□□□□□ -0.3
TPT1-201ENST00000309246 GIPC2Q8TF65 315 aa13.17□□□□□ -0.3
TPT1-201ENST00000309246 SMG9Q9H0W8 520 aaKnown RBP13.17□□□□□ -0.3
TPT1-201ENST00000309246 ASB7Q9H672 318 aa13.17□□□□□ -0.3
TPT1-201ENST00000309246 TASP1Q9H6P5 420 aa13.17□□□□□ -0.3
TPT1-201ENST00000309246 IL21Q9HBE4 155 aa13.17□□□□□ -0.3
TPT1-201ENST00000309246 C2orf42Q9NWW7 574 aa13.17□□□□□ -0.3
TPT1-201ENST00000309246 DPP3Q9NY33 737 aa13.17□□□□□ -0.3
TPT1-201ENST00000309246 HSFX1Q9UBD0 423 aa13.17□□□□□ -0.3
TPT1-201ENST00000309246 AGO2Q9UKV8 859 aaKnown RBP13.17□□□□□ -0.3
TPT1-201ENST00000309246 DSEQ9UL01 958 aa13.17□□□□□ -0.3
TPT1-201ENST00000309246 KIAA1549LQ6ZVL6 1849 aa13.17□□□□□ -0.3
TPT1-201ENST00000309246 HELZP42694 1942 aaKnown RBP13.16□□□□□ -0.3
TPT1-201ENST00000309246 PRR5-ARHGAP8B1AHC4 643 aa13.16□□□□□ -0.3
TPT1-201ENST00000309246 K7ESF4 209 aa13.16□□□□□ -0.3
TPT1-201ENST00000309246 BMP15O95972 392 aa13.16□□□□□ -0.3
TPT1-201ENST00000309246 SDHBP21912 280 aa13.16□□□□□ -0.3
TPT1-201ENST00000309246 PAX3P23760 479 aa13.16□□□□□ -0.3
TPT1-201ENST00000309246 CDC25CP30307 473 aa13.16□□□□□ -0.3
TPT1-201ENST00000309246 HOXC13P31276 330 aa13.16□□□□□ -0.3
TPT1-201ENST00000309246 TUFMP49411 452 aaKnown RBP13.16□□□□□ -0.3
TPT1-201ENST00000309246 ARHGAP8P85298 464 aa13.16□□□□□ -0.3
TPT1-201ENST00000309246 SIM2Q14190 667 aaPredicted RBP13.16□□□□□ -0.3
TPT1-201ENST00000309246 SF3A1Q15459 793 aaKnown RBP13.16□□□□□ -0.3
TPT1-201ENST00000309246 DGKKQ5KSL6 1271 aa13.16□□□□□ -0.3
TPT1-201ENST00000309246 WSCD1Q658N2 575 aa13.16□□□□□ -0.3
TPT1-201ENST00000309246 C1orf228Q6PIY5 440 aa13.16□□□□□ -0.3
TPT1-201ENST00000309246 DYMQ7RTS9 669 aa13.16□□□□□ -0.3
TPT1-201ENST00000309246 LRRTM3Q86VH5 581 aa13.16□□□□□ -0.3
TPT1-201ENST00000309246 METTL23Q86XA0 190 aa13.16□□□□□ -0.3
TPT1-201ENST00000309246 EFCAB13Q8IY85 973 aa13.16□□□□□ -0.3
TPT1-201ENST00000309246 THEM5Q8N1Q8 247 aa13.16□□□□□ -0.3
TPT1-201ENST00000309246 CELF5Q8N6W0 485 aaKnown RBP13.16□□□□□ -0.3
TPT1-201ENST00000309246 BPIFB1Q8TDL5 484 aa13.16□□□□□ -0.3
TPT1-201ENST00000309246 GCNAQ96QF7 691 aa13.16□□□□□ -0.3
TPT1-201ENST00000309246 OBP2AQ9NY56 170 aa13.16□□□□□ -0.3
TPT1-201ENST00000309246 ABI2Q9NYB9 513 aaPredicted RBP13.16□□□□□ -0.3
TPT1-201ENST00000309246 C2CD2Q9Y426 696 aa13.16□□□□□ -0.3
TPT1-201ENST00000309246 DYNC1LI1Q9Y6G9 523 aaKnown RBP13.16□□□□□ -0.3
TPT1-201ENST00000309246 DCDC2BA2VCK2 349 aa13.15□□□□□ -0.3
TPT1-201ENST00000309246 TULP1O00294 542 aaPredicted RBP13.15□□□□□ -0.3
TPT1-201ENST00000309246 HRO43593 1189 aa13.15□□□□□ -0.3
TPT1-201ENST00000309246 HAPLN1P10915 354 aaPredicted RBP13.15□□□□□ -0.3
TPT1-201ENST00000309246 ABCD1P33897 745 aa13.15□□□□□ -0.3
TPT1-201ENST00000309246 TAF12Q16514 161 aa13.15□□□□□ -0.3
TPT1-201ENST00000309246 SLFN12LQ6IEE8 588 aa13.15□□□□□ -0.3
TPT1-201ENST00000309246 CRELD2Q6UXH1 353 aaPredicted RBP13.15□□□□□ -0.3
TPT1-201ENST00000309246 USP49Q70CQ1 688 aa13.15□□□□□ -0.3
TPT1-201ENST00000309246 BRAPQ7Z569 592 aa13.15□□□□□ -0.3
TPT1-201ENST00000309246 KRI1Q8N9T8 703 aaKnown RBP13.15□□□□□ -0.3
TPT1-201ENST00000309246 STKLD1Q8NE28 680 aa13.15□□□□□ -0.3
TPT1-201ENST00000309246 SPPL2BQ8TCT7 592 aa13.15□□□□□ -0.3
TPT1-201ENST00000309246 POMGNT1Q8WZA1 660 aa13.15□□□□□ -0.3
TPT1-201ENST00000309246 EPSTI1Q96J88 318 aa13.15□□□□□ -0.3
TPT1-201ENST00000309246 SLC46A2Q9BY10 475 aa13.15□□□□□ -0.3
TPT1-201ENST00000309246 CCSER1Q9C0I3 900 aa13.15□□□□□ -0.3
TPT1-201ENST00000309246 ST6GALNAC4Q9H4F1 302 aa13.15□□□□□ -0.3
TPT1-201ENST00000309246 STYXL1Q9Y6J8 313 aa13.15□□□□□ -0.3
TPT1-201ENST00000309246 SPTBN2O15020 2390 aa13.14□□□□□ -0.31
TPT1-201ENST00000309246 KPNA7A9QM74 516 aa13.14□□□□□ -0.31
TPT1-201ENST00000309246 PAPSS2O95340 614 aaPredicted RBP13.14□□□□□ -0.31
TPT1-201ENST00000309246 RETP07949 1114 aa13.14□□□□□ -0.31
TPT1-201ENST00000309246 WEE1P30291 646 aa13.14□□□□□ -0.31
TPT1-201ENST00000309246 ADSSP30520 456 aa13.14□□□□□ -0.31
TPT1-201ENST00000309246 GPR15P49685 360 aa13.14□□□□□ -0.31
TPT1-201ENST00000309246 MCM2P49736 904 aa13.14□□□□□ -0.31
TPT1-201ENST00000309246 WNT7BP56706 349 aa13.14□□□□□ -0.31
TPT1-201ENST00000309246 PLCB2Q00722 1185 aa13.14□□□□□ -0.31
TPT1-201ENST00000309246 CCINQ13939 588 aa13.14□□□□□ -0.31
TPT1-201ENST00000309246 ITPRIPL2Q3MIP1 535 aa13.14□□□□□ -0.31
TPT1-201ENST00000309246 SV2CQ496J9 727 aa13.14□□□□□ -0.31
TPT1-201ENST00000309246 ZNF720Q7Z2F6 126 aa13.14□□□□□ -0.31
TPT1-201ENST00000309246 ARHGAP30Q7Z6I6 1101 aaPredicted RBP13.14□□□□□ -0.31
TPT1-201ENST00000309246 LONP2Q86WA8 852 aa13.14□□□□□ -0.31
TPT1-201ENST00000309246 C2orf15Q8WU43 125 aaKnown RBP13.14□□□□□ -0.31
TPT1-201ENST00000309246 HVCN1Q96D96 273 aa13.14□□□□□ -0.31
TPT1-201ENST00000309246 RTKNQ9BST9 563 aa13.14□□□□□ -0.31
TPT1-201ENST00000309246 TMLHEQ9NVH6 421 aa13.14□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 19.7 ms