RNA–Protein interactions for RNA: ENST00000309041.11

CEP290-201, Transcript of centrosomal protein 290, humanhuman

APPRIS ALT1 TSL 5 BASIC

Gene CEP290, Length 7,616 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CEP290-201ENST00000309041 XKR4Q5GH76 650 aa1.36□□□□□ -2.19
CEP290-201ENST00000309041 DDX59Q5T1V6 619 aaKnown RBP eCLIP1.36□□□□□ -2.19
CEP290-201ENST00000309041 CREB3L3Q68CJ9 461 aa1.36□□□□□ -2.19
CEP290-201ENST00000309041 SLFN12LQ6IEE8 588 aa1.36□□□□□ -2.19
CEP290-201ENST00000309041 PYHIN1Q6K0P9 492 aa1.36□□□□□ -2.19
CEP290-201ENST00000309041 CCDC129Q6ZRS4 1044 aa1.36□□□□□ -2.19
CEP290-201ENST00000309041 TRIM59Q8IWR1 403 aa1.36□□□□□ -2.19
CEP290-201ENST00000309041 AMOTL1Q8IY63 956 aa1.36□□□□□ -2.19
CEP290-201ENST00000309041 GPR135Q8IZ08 494 aa1.36□□□□□ -2.19
CEP290-201ENST00000309041 Q8N7P7 452 aa1.36□□□□□ -2.19
CEP290-201ENST00000309041 MGARPQ8TDB4 240 aa1.36□□□□□ -2.19
CEP290-201ENST00000309041 KHSRPQ92945 711 aaKnown RBP eCLIP1.36□□□□□ -2.192e-6■■■□□ 15.6
CEP290-201ENST00000309041 GLMNQ92990 594 aa1.36□□□□□ -2.19
CEP290-201ENST00000309041 ITFG2Q969R8 447 aa1.36□□□□□ -2.19
CEP290-201ENST00000309041 AJUBAQ96IF1 538 aa1.36□□□□□ -2.19
CEP290-201ENST00000309041 DEPDC7Q96QD5 511 aa1.36□□□□□ -2.19
CEP290-201ENST00000309041 RPS6KC1Q96S38 1066 aa1.36□□□□□ -2.19
CEP290-201ENST00000309041 UBAC1Q9BSL1 405 aa1.36□□□□□ -2.19
CEP290-201ENST00000309041 TNKS2Q9H2K2 1166 aa1.36□□□□□ -2.19
CEP290-201ENST00000309041 ADAM7Q9H2U9 754 aa1.36□□□□□ -2.19
CEP290-201ENST00000309041 ELAC1Q9H777 363 aaKnown RBP1.36□□□□□ -2.19
CEP290-201ENST00000309041 DONSONQ9NYP3 566 aa1.36□□□□□ -2.19
CEP290-201ENST00000309041 FKBPLQ9UIM3 349 aa1.36□□□□□ -2.19
CEP290-201ENST00000309041 PADI3Q9ULW8 664 aa1.36□□□□□ -2.19
CEP290-201ENST00000309041 MAB21L2Q9Y586 359 aa1.36□□□□□ -2.19
CEP290-201ENST00000309041 CHD1O14646 1710 aa1.36□□□□□ -2.19
CEP290-201ENST00000309041 ARAP1Q96P48 1450 aa1.36□□□□□ -2.19
CEP290-201ENST00000309041 RIC1Q4ADV7 1423 aa1.36□□□□□ -2.19
CEP290-201ENST00000309041 UGGT1Q9NYU2 1555 aa1.35□□□□□ -2.19
CEP290-201ENST00000309041 C9orf118A6NHY6 69 aa1.35□□□□□ -2.19
CEP290-201ENST00000309041 C6orf229H3BNL8 230 aa1.35□□□□□ -2.19
CEP290-201ENST00000309041 KCNQ3O43525 872 aa1.35□□□□□ -2.19
CEP290-201ENST00000309041 HTATSF1O43719 755 aaKnown RBP1.35□□□□□ -2.19
CEP290-201ENST00000309041 XYLBO75191 536 aa1.35□□□□□ -2.19
CEP290-201ENST00000309041 DXOO77932 396 aaKnown RBP1.35□□□□□ -2.19
CEP290-201ENST00000309041 SNAI1O95863 264 aaPredicted RBP1.35□□□□□ -2.19
CEP290-201ENST00000309041 GLI1P08151 1106 aa1.35□□□□□ -2.19
CEP290-201ENST00000309041 TNNI3P19429 210 aa1.35□□□□□ -2.19
CEP290-201ENST00000309041 GARSP41250 739 aaKnown RBP1.35□□□□□ -2.19
CEP290-201ENST00000309041 EVX1P49640 407 aa1.35□□□□□ -2.19
CEP290-201ENST00000309041 NRG3P56975 720 aa1.35□□□□□ -2.19
CEP290-201ENST00000309041 PRR5P85299 388 aa1.35□□□□□ -2.19
CEP290-201ENST00000309041 PITRM1Q5JRX3 1037 aa1.35□□□□□ -2.19
CEP290-201ENST00000309041 PTRHD1Q6GMV3 140 aaKnown RBP1.35□□□□□ -2.19
CEP290-201ENST00000309041 SLC30A6Q6NXT4 461 aa1.35□□□□□ -2.19
CEP290-201ENST00000309041 CLEC4GQ6UXB4 293 aa1.35□□□□□ -2.19
CEP290-201ENST00000309041 DBX2Q6ZNG2 339 aa1.35□□□□□ -2.19
CEP290-201ENST00000309041 SAMD7Q7Z3H4 446 aa1.35□□□□□ -2.19
CEP290-201ENST00000309041 LIX1Q8N485 282 aa1.35□□□□□ -2.19
CEP290-201ENST00000309041 SERBP1Q8NC51 408 aaKnown RBP eCLIP1.35□□□□□ -2.19
CEP290-201ENST00000309041 BBS10Q8TAM1 723 aa1.35□□□□□ -2.19
CEP290-201ENST00000309041 CFAP53Q96M91 514 aa1.35□□□□□ -2.19
CEP290-201ENST00000309041 NEK1Q96PY6 1258 aa1.35□□□□□ -2.19
CEP290-201ENST00000309041 PIGSQ96S52 555 aa1.35□□□□□ -2.19
CEP290-201ENST00000309041 HBEGFQ99075 208 aa1.35□□□□□ -2.19
CEP290-201ENST00000309041 ZKSCAN3Q9BRR0 538 aa1.35□□□□□ -2.19
CEP290-201ENST00000309041 GRIP2Q9C0E4 1043 aa1.35□□□□□ -2.19
CEP290-201ENST00000309041 PALD1Q9ULE6 856 aa1.35□□□□□ -2.19
CEP290-201ENST00000309041 EXOC7Q9UPT5 735 aa1.35□□□□□ -2.19
CEP290-201ENST00000309041 VIRMAQ69YN4 1812 aaKnown RBP1.35□□□□□ -2.19
CEP290-201ENST00000309041 WDR91A4D1P6 747 aa1.35□□□□□ -2.19
CEP290-201ENST00000309041 C16orf96A6NNT2 1141 aa1.35□□□□□ -2.19
CEP290-201ENST00000309041 MEFVO15553 781 aaPredicted RBP1.35□□□□□ -2.19
CEP290-201ENST00000309041 MAP3K7O43318 606 aa1.35□□□□□ -2.19
CEP290-201ENST00000309041 BUB1O43683 1085 aa1.35□□□□□ -2.19
CEP290-201ENST00000309041 PPP1R12BO60237 982 aaPredicted RBP1.35□□□□□ -2.19
CEP290-201ENST00000309041 SORBS3O60504 671 aa1.35□□□□□ -2.19
CEP290-201ENST00000309041 PIAS1O75925 651 aa1.35□□□□□ -2.19
CEP290-201ENST00000309041 PENKP01210 267 aaPredicted RBP1.35□□□□□ -2.19
CEP290-201ENST00000309041 H2AFXP16104 143 aaPredicted RBP1.35□□□□□ -2.19
CEP290-201ENST00000309041 PTGER1P34995 402 aa1.35□□□□□ -2.19
CEP290-201ENST00000309041 STAT1P42224 750 aa1.35□□□□□ -2.19
CEP290-201ENST00000309041 MTHFRP42898 656 aa1.35□□□□□ -2.19
CEP290-201ENST00000309041 NPTX2P47972 431 aa1.35□□□□□ -2.19
CEP290-201ENST00000309041 RAB7AP51149 207 aa1.35□□□□□ -2.19
CEP290-201ENST00000309041 KIF23Q02241 960 aaPredicted RBP1.35□□□□□ -2.19
CEP290-201ENST00000309041 EXOSC9Q06265 439 aaKnown RBP1.35□□□□□ -2.19
CEP290-201ENST00000309041 NIPAL4Q0D2K0 466 aa1.35□□□□□ -2.19
CEP290-201ENST00000309041 DDR2Q16832 855 aa1.35□□□□□ -2.19
CEP290-201ENST00000309041 TBC1D25Q3MII6 688 aa1.35□□□□□ -2.19
CEP290-201ENST00000309041 LRRC24Q50LG9 513 aa1.35□□□□□ -2.19
CEP290-201ENST00000309041 ATP6AP1LQ52LC2 224 aa1.35□□□□□ -2.19
CEP290-201ENST00000309041 EPC2Q52LR7 807 aa1.35□□□□□ -2.19
CEP290-201ENST00000309041 TM4SF20Q53R12 229 aa1.35□□□□□ -2.19
CEP290-201ENST00000309041 MAP1SQ66K74 1059 aaPredicted RBP1.35□□□□□ -2.19
CEP290-201ENST00000309041 DPY19L2P1Q6NXN4 242 aa1.35□□□□□ -2.19
CEP290-201ENST00000309041 FBXO38Q6PIJ6 1188 aa1.35□□□□□ -2.19
CEP290-201ENST00000309041 METAP1DQ6UB28 335 aaPredicted RBP1.35□□□□□ -2.19
CEP290-201ENST00000309041 SEPT14Q6ZU15 432 aa1.35□□□□□ -2.19
CEP290-201ENST00000309041 MAATS1Q7Z4T9 603 aa1.35□□□□□ -2.19
CEP290-201ENST00000309041 WDR53Q7Z5U6 358 aaPredicted RBP1.35□□□□□ -2.19
CEP290-201ENST00000309041 GRASPQ7Z6J2 395 aaPredicted RBP1.35□□□□□ -2.19
CEP290-201ENST00000309041 PNMA8AQ86V59 439 aaPredicted RBP1.35□□□□□ -2.19
CEP290-201ENST00000309041 MYPOPQ86VE0 399 aaPredicted RBP1.35□□□□□ -2.19
CEP290-201ENST00000309041 DGKHQ86XP1 1220 aa1.35□□□□□ -2.19
CEP290-201ENST00000309041 ZNF710Q8N1W2 664 aa1.35□□□□□ -2.19
CEP290-201ENST00000309041 C7orf57Q8NEG2 295 aa1.35□□□□□ -2.19
CEP290-201ENST00000309041 DENND1AQ8TEH3 1009 aa1.35□□□□□ -2.19
CEP290-201ENST00000309041 TBC1D5Q92609 795 aa1.35□□□□□ -2.19
CEP290-201ENST00000309041 RNF183Q96D59 192 aa1.35□□□□□ -2.19
Retrieved 100 of 20,778 RNA–protein pairs in 25.7 ms