RNA–Protein interactions for RNA: ENST00000308077.9

PTCD2-201, Transcript of pentatricopeptide repeat domain 2, humanhuman

TSL 1 (best)

Gene PTCD2, Length 2,195 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCD2-201ENST00000308077 WNT8AQ9H1J5 351 aa7.42□□□□□ -1.22
PTCD2-201ENST00000308077 TSPYL2Q9H2G4 693 aaPredicted RBP7.42□□□□□ -1.22
PTCD2-201ENST00000308077 OSGEPQ9NPF4 335 aa7.42□□□□□ -1.22
PTCD2-201ENST00000308077 PUF60Q9UHX1 559 aaKnown RBP7.42□□□□□ -1.22
PTCD2-201ENST00000308077 TSC2P49815 1807 aa7.41□□□□□ -1.22
PTCD2-201ENST00000308077 UQCRHLA0A096LP55 91 aa7.41□□□□□ -1.22
PTCD2-201ENST00000308077 MED19A0JLT2 244 aaPredicted RBP7.41□□□□□ -1.22
PTCD2-201ENST00000308077 GRID2IPA4D2P6 1211 aa7.41□□□□□ -1.22
PTCD2-201ENST00000308077 KPNA7A9QM74 516 aa7.41□□□□□ -1.22
PTCD2-201ENST00000308077 HCRTO43612 131 aa7.41□□□□□ -1.22
PTCD2-201ENST00000308077 TACC1O75410 805 aa7.41□□□□□ -1.22
PTCD2-201ENST00000308077 PALMO75781 387 aa7.41□□□□□ -1.22
PTCD2-201ENST00000308077 POMCP01189 267 aa7.41□□□□□ -1.22
PTCD2-201ENST00000308077 UQCRHP07919 91 aa7.41□□□□□ -1.22
PTCD2-201ENST00000308077 PAEPP09466 180 aa7.41□□□□□ -1.22
PTCD2-201ENST00000308077 SKIP12755 728 aa7.41□□□□□ -1.22
PTCD2-201ENST00000308077 TAF6P49848 677 aa7.41□□□□□ -1.22
PTCD2-201ENST00000308077 LILRA4P59901 499 aa7.41□□□□□ -1.22
PTCD2-201ENST00000308077 FAM189BP81408 668 aa7.41□□□□□ -1.22
PTCD2-201ENST00000308077 AMPD2Q01433 879 aa7.41□□□□□ -1.22
PTCD2-201ENST00000308077 CENPCQ03188 943 aa7.41□□□□□ -1.22
PTCD2-201ENST00000308077 NAA30Q147X3 362 aaPredicted RBP7.41□□□□□ -1.22
PTCD2-201ENST00000308077 C1orf53Q5VUE5 145 aa7.41□□□□□ -1.22
PTCD2-201ENST00000308077 NAA35Q5VZE5 725 aa7.41□□□□□ -1.22
PTCD2-201ENST00000308077 SLC24A5Q71RS6 500 aa7.41□□□□□ -1.22
PTCD2-201ENST00000308077 UBE2Q1Q7Z7E8 422 aa7.41□□□□□ -1.22
PTCD2-201ENST00000308077 HOMEZQ8IX15 550 aa7.41□□□□□ -1.22
PTCD2-201ENST00000308077 C3orf58Q8NDZ4 430 aa7.41□□□□□ -1.22
PTCD2-201ENST00000308077 TRIM58Q8NG06 486 aa7.41□□□□□ -1.22
PTCD2-201ENST00000308077 TPCN2Q8NHX9 752 aa7.41□□□□□ -1.22
PTCD2-201ENST00000308077 KBTBD7Q8WVZ9 684 aa7.41□□□□□ -1.22
PTCD2-201ENST00000308077 CTNNBL1Q8WYA6 563 aaPredicted RBP7.41□□□□□ -1.22
PTCD2-201ENST00000308077 RFFLQ8WZ73 363 aa7.41□□□□□ -1.22
PTCD2-201ENST00000308077 RABGGTAQ92696 567 aa7.41□□□□□ -1.22
PTCD2-201ENST00000308077 PGBD4Q96DM1 585 aa7.41□□□□□ -1.22
PTCD2-201ENST00000308077 TMEM176AQ96HP8 235 aa7.41□□□□□ -1.22
PTCD2-201ENST00000308077 TOX2Q96NM4 488 aa7.41□□□□□ -1.22
PTCD2-201ENST00000308077 PAAF1Q9BRP4 392 aa7.41□□□□□ -1.22
PTCD2-201ENST00000308077 PPP1R12CQ9BZL4 782 aa7.41□□□□□ -1.22
PTCD2-201ENST00000308077 HIPK3Q9H422 1215 aa7.41□□□□□ -1.22
PTCD2-201ENST00000308077 L2HGDHQ9H9P8 463 aa7.41□□□□□ -1.22
PTCD2-201ENST00000308077 SLC38A7Q9NVC3 462 aa7.41□□□□□ -1.22
PTCD2-201ENST00000308077 GDAP2Q9NXN4 497 aa7.41□□□□□ -1.22
PTCD2-201ENST00000308077 THEGQ9P2T0 379 aa7.41□□□□□ -1.22
PTCD2-201ENST00000308077 CHORDC1Q9UHD1 332 aaPredicted RBP7.41□□□□□ -1.22
PTCD2-201ENST00000308077 BARX2Q9UMQ3 279 aaPredicted RBP7.41□□□□□ -1.22
PTCD2-201ENST00000308077 COG5Q9UP83 839 aa7.41□□□□□ -1.22
PTCD2-201ENST00000308077 PCDHGC5Q9Y5F6 944 aa7.41□□□□□ -1.22
PTCD2-201ENST00000308077 MICAL3Q7RTP6 2002 aa7.4□□□□□ -1.22
PTCD2-201ENST00000308077 CTAGE9A4FU28 777 aa7.4□□□□□ -1.22
PTCD2-201ENST00000308077 CASTOR2A6NHX0 329 aa7.4□□□□□ -1.22
PTCD2-201ENST00000308077 DCDC2CA8MYV0 355 aa7.4□□□□□ -1.22
PTCD2-201ENST00000308077 PODXLO00592 558 aa7.4□□□□□ -1.22
PTCD2-201ENST00000308077 INPPL1O15357 1258 aa7.4□□□□□ -1.22
PTCD2-201ENST00000308077 B4GALT3O60512 393 aa7.4□□□□□ -1.22
PTCD2-201ENST00000308077 URI1O94763 535 aaPredicted RBP7.4□□□□□ -1.22
PTCD2-201ENST00000308077 FGFR1P11362 822 aa7.4□□□□□ -1.22
PTCD2-201ENST00000308077 CYP2C18P33260 490 aa7.4□□□□□ -1.22
PTCD2-201ENST00000308077 PNPLA4P41247 253 aa7.4□□□□□ -1.22
PTCD2-201ENST00000308077 CLCNKBP51801 687 aa7.4□□□□□ -1.22
PTCD2-201ENST00000308077 NAP1L1P55209 391 aaKnown RBP7.4□□□□□ -1.22
PTCD2-201ENST00000308077 CCL23P55773 120 aa7.4□□□□□ -1.22
PTCD2-201ENST00000308077 SV2CQ496J9 727 aa7.4□□□□□ -1.22
PTCD2-201ENST00000308077 C2CD6Q53TS8 623 aa7.4□□□□□ -1.22
PTCD2-201ENST00000308077 CLLU1OSQ5K130 101 aa7.4□□□□□ -1.22
PTCD2-201ENST00000308077 LLGL2Q6P1M3 1020 aa7.4□□□□□ -1.22
PTCD2-201ENST00000308077 MON1BQ7L1V2 547 aa7.4□□□□□ -1.22
PTCD2-201ENST00000308077 MCOLN2Q8IZK6 566 aa7.4□□□□□ -1.22
PTCD2-201ENST00000308077 LRRC57Q8N9N7 239 aa7.4□□□□□ -1.22
PTCD2-201ENST00000308077 SLC35G2Q8TBE7 412 aa7.4□□□□□ -1.22
PTCD2-201ENST00000308077 GOLPH3Q9H4A6 298 aa7.4□□□□□ -1.22
PTCD2-201ENST00000308077 FAM124BQ9H5Z6 455 aaPredicted RBP7.4□□□□□ -1.22
PTCD2-201ENST00000308077 TBX21Q9UL17 535 aa7.4□□□□□ -1.22
PTCD2-201ENST00000308077 PCDHGC3Q9UN70 934 aa7.4□□□□□ -1.22
PTCD2-201ENST00000308077 L1RE1Q9UN81 338 aa7.4□□□□□ -1.22
PTCD2-201ENST00000308077 INPP5FQ9Y2H2 1132 aa7.4□□□□□ -1.22
PTCD2-201ENST00000308077 FLNBO75369 2602 aaKnown RBP7.4□□□□□ -1.22
PTCD2-201ENST00000308077 ASH1LQ9NR48 2969 aaKnown RBP7.4□□□□□ -1.23
PTCD2-201ENST00000308077 SPTBN4Q9H254 2564 aa7.4□□□□□ -1.23
PTCD2-201ENST00000308077 ENPP3O14638 875 aa7.4□□□□□ -1.23
PTCD2-201ENST00000308077 NCK2O43639 380 aa7.4□□□□□ -1.23
PTCD2-201ENST00000308077 EOMESO95936 686 aa7.4□□□□□ -1.23
PTCD2-201ENST00000308077 FTCDO95954 541 aa7.4□□□□□ -1.23
PTCD2-201ENST00000308077 CXCL10P02778 98 aa7.4□□□□□ -1.23
PTCD2-201ENST00000308077 CYP1A2P05177 515 aa7.4□□□□□ -1.23
PTCD2-201ENST00000308077 CD19P15391 556 aa7.4□□□□□ -1.23
PTCD2-201ENST00000308077 FOSL2P15408 326 aa7.4□□□□□ -1.23
PTCD2-201ENST00000308077 CDH5P33151 784 aaPredicted RBP7.4□□□□□ -1.23
PTCD2-201ENST00000308077 NOP2P46087 812 aaKnown RBP7.4□□□□□ -1.23
PTCD2-201ENST00000308077 GPC5P78333 572 aa7.4□□□□□ -1.23
PTCD2-201ENST00000308077 PTP4A2Q12974 167 aa7.4□□□□□ -1.23
PTCD2-201ENST00000308077 GRIK3Q13003 919 aa7.4□□□□□ -1.23
PTCD2-201ENST00000308077 TCEAL1Q15170 157 aa7.4□□□□□ -1.23
PTCD2-201ENST00000308077 UPP1Q16831 310 aa7.4□□□□□ -1.23
PTCD2-201ENST00000308077 LRRC26Q2I0M4 334 aa7.4□□□□□ -1.23
PTCD2-201ENST00000308077 PAPD7Q5XG87 772 aaKnown RBP7.4□□□□□ -1.23
PTCD2-201ENST00000308077 DENND1BQ6P3S1 775 aa7.4□□□□□ -1.23
PTCD2-201ENST00000308077 CD300LGQ6UXG3 332 aa7.4□□□□□ -1.23
PTCD2-201ENST00000308077 TRIM72Q6ZMU5 477 aa7.4□□□□□ -1.23
PTCD2-201ENST00000308077 OSTM1Q86WC4 334 aa7.4□□□□□ -1.23
Retrieved 100 of 20,778 RNA–protein pairs in 25.8 ms