RNA–Protein interactions for RNA: ENST00000307017.8

USP38-201, Transcript of ubiquitin specific peptidase 38, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene USP38, Length 7,009 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP38-201ENST00000307017 PDE5AO76074 875 aa13.17□□□□□ -0.3
USP38-201ENST00000307017 BGNP21810 368 aa13.17□□□□□ -0.3
USP38-201ENST00000307017 EIF2B2P49770 351 aaKnown RBP13.17□□□□□ -0.3
USP38-201ENST00000307017 KLRC3Q07444 240 aa13.17□□□□□ -0.3
USP38-201ENST00000307017 OASLQ15646 514 aaKnown RBP13.17□□□□□ -0.3
USP38-201ENST00000307017 NEDD8Q15843 81 aa13.17□□□□□ -0.3
USP38-201ENST00000307017 SLC30A10Q6XR72 485 aa13.17□□□□□ -0.3
USP38-201ENST00000307017 HDHD2Q9H0R4 259 aa13.17□□□□□ -0.3
USP38-201ENST00000307017 RANBP17Q9H2T7 1088 aaKnown RBP13.17□□□□□ -0.3
USP38-201ENST00000307017 OSBPL3Q9H4L5 887 aa13.17□□□□□ -0.3
USP38-201ENST00000307017 KLF15Q9UIH9 416 aa13.17□□□□□ -0.3
USP38-201ENST00000307017 ABCA5Q8WWZ7 1642 aa13.17□□□□□ -0.3
USP38-201ENST00000307017 GSG1L2A8MUP6 293 aa13.17□□□□□ -0.3
USP38-201ENST00000307017 CYP7B1O75881 506 aa13.17□□□□□ -0.3
USP38-201ENST00000307017 GYPCP04921 128 aa13.17□□□□□ -0.3
USP38-201ENST00000307017 IRAK1P51617 712 aa13.17□□□□□ -0.3
USP38-201ENST00000307017 BMPR2Q13873 1038 aa13.17□□□□□ -0.3
USP38-201ENST00000307017 TEDDM1Q5T9Z0 273 aa13.17□□□□□ -0.3
USP38-201ENST00000307017 CYB5D1Q6P9G0 228 aa13.17□□□□□ -0.3
USP38-201ENST00000307017 TMC5Q6UXY8 1006 aa13.17□□□□□ -0.3
USP38-201ENST00000307017 PPP1R14AQ96A00 147 aa13.17□□□□□ -0.3
USP38-201ENST00000307017 CCT8L1PA6NM43 557 aa13.17□□□□□ -0.3
USP38-201ENST00000307017 PIAS1O75925 651 aa13.17□□□□□ -0.3
USP38-201ENST00000307017 SUPT20HL1Q3ZLR7 823 aa13.17□□□□□ -0.3
USP38-201ENST00000307017 C16orf89Q6UX73 402 aa13.17□□□□□ -0.3
USP38-201ENST00000307017 TPD52L3Q96J77 140 aa13.17□□□□□ -0.3
USP38-201ENST00000307017 C6orf62Q9GZU0 229 aaPredicted RBP13.17□□□□□ -0.3
USP38-201ENST00000307017 OSBPL5Q9H0X9 879 aaPredicted RBP13.17□□□□□ -0.3
USP38-201ENST00000307017 RHOBTB1O94844 696 aa13.17□□□□□ -0.3
USP38-201ENST00000307017 IREB2P48200 963 aaKnown RBP13.17□□□□□ -0.3
USP38-201ENST00000307017 GCLCP48506 637 aaPredicted RBP13.17□□□□□ -0.3
USP38-201ENST00000307017 BYSLQ13895 437 aaKnown RBP13.17□□□□□ -0.3
USP38-201ENST00000307017 CIAPIN1Q6FI81 312 aa13.17□□□□□ -0.3
USP38-201ENST00000307017 ST13P5Q8NFI4 369 aaPredicted RBP13.17□□□□□ -0.3
USP38-201ENST00000307017 ECSITQ9BQ95 431 aa13.17□□□□□ -0.3
USP38-201ENST00000307017 IARS2Q9NSE4 1012 aaKnown RBP13.17□□□□□ -0.3
USP38-201ENST00000307017 SLC9A8Q9Y2E8 581 aa13.17□□□□□ -0.3
USP38-201ENST00000307017 TRAF2Q12933 501 aa13.16□□□□□ -0.3
USP38-201ENST00000307017 GPAT2Q6NUI2 795 aa13.16□□□□□ -0.3
USP38-201ENST00000307017 IPCEF1Q8WWN9 437 aaPredicted RBP13.16□□□□□ -0.3
USP38-201ENST00000307017 NSL1Q96IY1 281 aa13.16□□□□□ -0.3
USP38-201ENST00000307017 APEX2Q9UBZ4 518 aa13.16□□□□□ -0.3
USP38-201ENST00000307017 CST8O60676 142 aa13.16□□□□□ -0.3
USP38-201ENST00000307017 NCAM1P13591 858 aa13.16□□□□□ -0.3
USP38-201ENST00000307017 NNMTP40261 264 aa13.16□□□□□ -0.3
USP38-201ENST00000307017 CAV1Q03135 178 aa13.16□□□□□ -0.3
USP38-201ENST00000307017 STX19Q8N4C7 294 aa13.16□□□□□ -0.3
USP38-201ENST00000307017 ANKARQ7Z5J8 1434 aa13.16□□□□□ -0.3
USP38-201ENST00000307017 ZSCAN5CA6NGD5 496 aaPredicted RBP13.16□□□□□ -0.3
USP38-201ENST00000307017 ATP9AO75110 1047 aa13.16□□□□□ -0.3
USP38-201ENST00000307017 GRAPQ13588 217 aa13.16□□□□□ -0.3
USP38-201ENST00000307017 NCOA4Q13772 614 aa13.16□□□□□ -0.3
USP38-201ENST00000307017 RBBP8NLQ8NC74 664 aaPredicted RBP13.16□□□□□ -0.3
USP38-201ENST00000307017 GRAPLQ8TC17 118 aaPredicted RBP13.16□□□□□ -0.3
USP38-201ENST00000307017 MAGEB5Q9BZ81 275 aa13.16□□□□□ -0.3
USP38-201ENST00000307017 GPRC5CQ9NQ84 441 aa13.16□□□□□ -0.3
USP38-201ENST00000307017 CHKBQ9Y259 395 aa13.16□□□□□ -0.3
USP38-201ENST00000307017 KRT87PA6NCN2 255 aa13.16□□□□□ -0.3
USP38-201ENST00000307017 KLRC1P26715 233 aa13.16□□□□□ -0.3
USP38-201ENST00000307017 PTGISQ16647 500 aa13.16□□□□□ -0.3
USP38-201ENST00000307017 TMEM179Q6ZVK1 233 aa13.16□□□□□ -0.3
USP38-201ENST00000307017 SYTL1Q8IYJ3 562 aa13.16□□□□□ -0.3
USP38-201ENST00000307017 ZNF669Q96BR6 464 aaPredicted RBP13.16□□□□□ -0.3
USP38-201ENST00000307017 NMRK2Q9NPI5 230 aa13.16□□□□□ -0.3
USP38-201ENST00000307017 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP13.16□□□□□ -0.3
USP38-201ENST00000307017 SURF1Q15526 300 aa13.16□□□□□ -0.3
USP38-201ENST00000307017 OTUD3Q5T2D3 398 aaPredicted RBP13.16□□□□□ -0.3
USP38-201ENST00000307017 TTC23LQ6PF05 361 aa13.16□□□□□ -0.3
USP38-201ENST00000307017 TRPC4APQ8TEL6 797 aa13.16□□□□□ -0.3
USP38-201ENST00000307017 C1orf232A0A0U1RR37 186 aa13.15□□□□□ -0.3
USP38-201ENST00000307017 UCHL3P15374 230 aa13.15□□□□□ -0.3
USP38-201ENST00000307017 SARSP49591 514 aaKnown RBP13.15□□□□□ -0.3
USP38-201ENST00000307017 CNGA2Q16280 664 aa13.15□□□□□ -0.3
USP38-201ENST00000307017 DALRD3Q5D0E6 543 aaKnown RBP13.15□□□□□ -0.3
USP38-201ENST00000307017 TLK2Q86UE8 772 aa13.15□□□□□ -0.3
USP38-201ENST00000307017 ABCG8Q9H221 673 aa13.15□□□□□ -0.3
USP38-201ENST00000307017 PIPSLA2A3N6 862 aa13.15□□□□□ -0.3
USP38-201ENST00000307017 TADA2AO75478 443 aa13.15□□□□□ -0.3
USP38-201ENST00000307017 C16orf72Q14CZ0 275 aa13.15□□□□□ -0.3
USP38-201ENST00000307017 RELTQ969Z4 430 aa13.15□□□□□ -0.3
USP38-201ENST00000307017 ARHGEF26Q96DR7 871 aa13.15□□□□□ -0.3
USP38-201ENST00000307017 FAM187AA6NFU0 413 aa13.15□□□□□ -0.3
USP38-201ENST00000307017 GSNP06396 782 aa13.15□□□□□ -0.3
USP38-201ENST00000307017 NCALDP61601 193 aa13.15□□□□□ -0.3
USP38-201ENST00000307017 SLC44A4Q53GD3 710 aa13.15□□□□□ -0.3
USP38-201ENST00000307017 RC3H1Q5TC82 1133 aaKnown RBP13.15□□□□□ -0.3
USP38-201ENST00000307017 TC2NQ8N9U0 490 aa13.15□□□□□ -0.3
USP38-201ENST00000307017 APPL2Q8NEU8 664 aa13.15□□□□□ -0.3
USP38-201ENST00000307017 DCAF4Q8WV16 495 aa13.15□□□□□ -0.3
USP38-201ENST00000307017 DAPK2Q9UIK4 370 aa13.15□□□□□ -0.3
USP38-201ENST00000307017 ALBP02768 609 aa13.15□□□□□ -0.3
USP38-201ENST00000307017 CLK2P49760 499 aaKnown RBP13.15□□□□□ -0.3
USP38-201ENST00000307017 KCNK10P57789 538 aa13.15□□□□□ -0.3
USP38-201ENST00000307017 DPYDQ12882 1025 aa13.15□□□□□ -0.3
USP38-201ENST00000307017 SNRNP35Q16560 246 aaKnown RBP13.15□□□□□ -0.3
USP38-201ENST00000307017 DUOXA2Q1HG44 320 aa13.15□□□□□ -0.3
USP38-201ENST00000307017 E2F7Q96AV8 911 aa13.15□□□□□ -0.3
USP38-201ENST00000307017 PHF21BQ96EK2 531 aa13.15□□□□□ -0.3
USP38-201ENST00000307017 TRIM54Q9BYV2 358 aa13.15□□□□□ -0.3
USP38-201ENST00000307017 SPRTNQ9H040 489 aaPredicted RBP13.15□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 25.4 ms