RNA–Protein interactions for RNA: ENST00000306085.10

TRIM56-201, Transcript of tripartite motif containing 56, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene TRIM56, Length 10,952 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM56-201ENST00000306085 HIST2H2ACQ16777 129 aaPredicted RBP13.93□□□□□ -0.18
TRIM56-201ENST00000306085 HIST2H2AA3Q6FI13 130 aa13.93□□□□□ -0.18
TRIM56-201ENST00000306085 LPCAT2Q7L5N7 544 aa13.93□□□□□ -0.18
TRIM56-201ENST00000306085 RBM15Q96T37 977 aaKnown RBP eCLIP13.93□□□□□ -0.183e-6■■■□□ 15
TRIM56-201ENST00000306085 TMEM138Q9NPI0 162 aa13.93□□□□□ -0.18
TRIM56-201ENST00000306085 ZNF668Q96K58 619 aaPredicted RBP13.93□□□□□ -0.18
TRIM56-201ENST00000306085 RAB6BQ9NRW1 208 aa13.93□□□□□ -0.18
TRIM56-201ENST00000306085 SYNPO2Q9UMS6 1093 aa13.93□□□□□ -0.18
TRIM56-201ENST00000306085 AGTP01019 485 aa13.93□□□□□ -0.18
TRIM56-201ENST00000306085 HSD3B2P26439 372 aa13.93□□□□□ -0.18
TRIM56-201ENST00000306085 NESP48681 1621 aa13.93□□□□□ -0.18
TRIM56-201ENST00000306085 FAM25EA8MYX2 175 aa13.93□□□□□ -0.18
TRIM56-201ENST00000306085 PGM3O95394 542 aa13.93□□□□□ -0.18
TRIM56-201ENST00000306085 HOXC9P31274 260 aa13.93□□□□□ -0.18
TRIM56-201ENST00000306085 RGS2P41220 211 aa13.93□□□□□ -0.18
TRIM56-201ENST00000306085 TMEM79Q9BSE2 394 aa13.93□□□□□ -0.18
TRIM56-201ENST00000306085 EPC1Q9H2F5 836 aa13.93□□□□□ -0.18
TRIM56-201ENST00000306085 TNPO2O14787 897 aaKnown RBP13.93□□□□□ -0.18
TRIM56-201ENST00000306085 EXTL3O43909 919 aa13.93□□□□□ -0.18
TRIM56-201ENST00000306085 MTFR1Q15390 333 aa13.93□□□□□ -0.18
TRIM56-201ENST00000306085 KCTD21Q4G0X4 260 aa13.93□□□□□ -0.18
TRIM56-201ENST00000306085 GPR63Q9BZJ6 419 aa13.93□□□□□ -0.18
TRIM56-201ENST00000306085 NCF1BA6NI72 391 aaPredicted RBP13.92□□□□□ -0.18
TRIM56-201ENST00000306085 NCF1CA8MVU1 366 aaPredicted RBP13.92□□□□□ -0.18
TRIM56-201ENST00000306085 FAM20BO75063 409 aa13.92□□□□□ -0.18
TRIM56-201ENST00000306085 CYP7B1O75881 506 aa13.92□□□□□ -0.18
TRIM56-201ENST00000306085 ATP1A1P05023 1023 aaKnown RBP13.92□□□□□ -0.18
TRIM56-201ENST00000306085 NCF1P14598 390 aaPredicted RBP13.92□□□□□ -0.18
TRIM56-201ENST00000306085 RCVRNP35243 200 aa13.92□□□□□ -0.18
TRIM56-201ENST00000306085 MTMR1Q13613 665 aa13.92□□□□□ -0.18
TRIM56-201ENST00000306085 COPG2Q9UBF2 871 aa13.92□□□□□ -0.18
TRIM56-201ENST00000306085 DYRK3O43781 588 aa13.92□□□□□ -0.18
TRIM56-201ENST00000306085 CAMK1Q14012 370 aa13.92□□□□□ -0.18
TRIM56-201ENST00000306085 UTS2BQ765I0 119 aa13.92□□□□□ -0.18
TRIM56-201ENST00000306085 MAGI1Q96QZ7 1491 aaPredicted RBP13.92□□□□□ -0.18
TRIM56-201ENST00000306085 ATAD3AQ9NVI7 634 aa13.92□□□□□ -0.18
TRIM56-201ENST00000306085 ZNF222Q9UK12 451 aa13.92□□□□□ -0.18
TRIM56-201ENST00000306085 IQGAP2Q13576 1575 aa13.92□□□□□ -0.18
TRIM56-201ENST00000306085 MEI4A8MW99 385 aa13.92□□□□□ -0.18
TRIM56-201ENST00000306085 TIMM44O43615 452 aa13.92□□□□□ -0.18
TRIM56-201ENST00000306085 MED26O95402 600 aa13.92□□□□□ -0.18
TRIM56-201ENST00000306085 EIF2S3LQ2VIR3 472 aaKnown RBP13.92□□□□□ -0.18
TRIM56-201ENST00000306085 SETD3Q86TU7 594 aaPredicted RBP13.92□□□□□ -0.18
TRIM56-201ENST00000306085 PNMA6FA0A0J9YX94 578 aa13.92□□□□□ -0.18
TRIM56-201ENST00000306085 HOXA7P31268 230 aaPredicted RBP13.92□□□□□ -0.18
TRIM56-201ENST00000306085 CCT8P50990 548 aa13.92□□□□□ -0.18
TRIM56-201ENST00000306085 CEBPGP53567 150 aa13.92□□□□□ -0.18
TRIM56-201ENST00000306085 MTM1Q13496 603 aa13.92□□□□□ -0.18
TRIM56-201ENST00000306085 POLD4Q9HCU8 107 aa13.92□□□□□ -0.18
TRIM56-201ENST00000306085 TRPC5OSA6NMA1 111 aa13.92□□□□□ -0.18
TRIM56-201ENST00000306085 JAK1P23458 1154 aa13.92□□□□□ -0.18
TRIM56-201ENST00000306085 IL5RAQ01344 420 aa13.92□□□□□ -0.18
TRIM56-201ENST00000306085 TAP1Q03518 808 aa13.92□□□□□ -0.18
TRIM56-201ENST00000306085 ZNF671Q8TAW3 534 aa13.92□□□□□ -0.18
TRIM56-201ENST00000306085 SPACA6W5XKT8 324 aa13.92□□□□□ -0.18
TRIM56-201ENST00000306085 HMBSP08397 361 aa13.92□□□□□ -0.18
TRIM56-201ENST00000306085 ANXA11P50995 505 aaKnown RBP13.92□□□□□ -0.18
TRIM56-201ENST00000306085 TAF13Q15543 124 aa13.92□□□□□ -0.18
TRIM56-201ENST00000306085 NLRP10Q86W26 655 aa13.92□□□□□ -0.18
TRIM56-201ENST00000306085 NMRK1Q9NWW6 199 aa13.92□□□□□ -0.18
TRIM56-201ENST00000306085 TGFBR2P37173 567 aa13.92□□□□□ -0.18
TRIM56-201ENST00000306085 CHRNDQ07001 517 aa13.92□□□□□ -0.18
TRIM56-201ENST00000306085 PROM2Q8N271 834 aa13.92□□□□□ -0.18
TRIM56-201ENST00000306085 KANSL2Q9H9L4 492 aa13.92□□□□□ -0.18
TRIM56-201ENST00000306085 COPRSQ9NQ92 184 aa13.92□□□□□ -0.18
TRIM56-201ENST00000306085 SLC30A1Q9Y6M5 507 aa13.92□□□□□ -0.18
TRIM56-201ENST00000306085 CD109Q6YHK3 1445 aa13.92□□□□□ -0.18
TRIM56-201ENST00000306085 GNG14A0A1W2PPG7 69 aa13.92□□□□□ -0.18
TRIM56-201ENST00000306085 ORC2Q13416 577 aaPredicted RBP13.92□□□□□ -0.18
TRIM56-201ENST00000306085 MMGT1Q8N4V1 131 aa13.92□□□□□ -0.18
TRIM56-201ENST00000306085 SLC10A4Q96EP9 437 aa13.92□□□□□ -0.18
TRIM56-201ENST00000306085 RNF112Q9ULX5 631 aa13.92□□□□□ -0.18
TRIM56-201ENST00000306085 PCNAP12004 261 aa13.92□□□□□ -0.18
TRIM56-201ENST00000306085 ETFBP38117 255 aa13.92□□□□□ -0.18
TRIM56-201ENST00000306085 APOL4Q9BPW4 351 aa13.92□□□□□ -0.18
TRIM56-201ENST00000306085 UBA2Q9UBT2 640 aaPredicted RBP13.92□□□□□ -0.18
TRIM56-201ENST00000306085 SRPRBQ9Y5M8 271 aaKnown RBP13.92□□□□□ -0.18
TRIM56-201ENST00000306085 ZNF804BA4D1E1 1349 aa13.91□□□□□ -0.18
TRIM56-201ENST00000306085 DSG3P32926 999 aa13.91□□□□□ -0.18
TRIM56-201ENST00000306085 NAIF1Q69YI7 327 aaPredicted RBP13.91□□□□□ -0.18
TRIM56-201ENST00000306085 SLC40A1Q9NP59 571 aa13.91□□□□□ -0.18
TRIM56-201ENST00000306085 CAMSAP3Q9P1Y5 1249 aaPredicted RBP13.91□□□□□ -0.18
TRIM56-201ENST00000306085 PPEF1O14829 653 aaPredicted RBP13.91□□□□□ -0.18
TRIM56-201ENST00000306085 MYL12AP19105 171 aa13.91□□□□□ -0.18
TRIM56-201ENST00000306085 TRIM72Q6ZMU5 477 aa13.91□□□□□ -0.18
TRIM56-201ENST00000306085 IPMKQ8NFU5 416 aa13.91□□□□□ -0.18
TRIM56-201ENST00000306085 KIF12Q96FN5 646 aa13.91□□□□□ -0.18
TRIM56-201ENST00000306085 CCSER1Q9C0I3 900 aa13.91□□□□□ -0.18
TRIM56-201ENST00000306085 SLC39A10Q9ULF5 831 aa13.91□□□□□ -0.18
TRIM56-201ENST00000306085 NR5A2O00482 541 aa13.91□□□□□ -0.18
TRIM56-201ENST00000306085 POLR3FQ9H1D9 316 aaPredicted RBP13.91□□□□□ -0.18
TRIM56-201ENST00000306085 TCEA3O75764 348 aa13.91□□□□□ -0.18
TRIM56-201ENST00000306085 ENO2P09104 434 aaPredicted RBP13.91□□□□□ -0.18
TRIM56-201ENST00000306085 SPATA2LQ8IUW3 424 aaPredicted RBP13.91□□□□□ -0.18
TRIM56-201ENST00000306085 PPP2R3CQ969Q6 453 aa13.91□□□□□ -0.18
TRIM56-201ENST00000306085 HMG20AQ9NP66 347 aa13.91□□□□□ -0.18
TRIM56-201ENST00000306085 MAP3K20Q9NYL2 800 aaKnown RBP13.91□□□□□ -0.18
TRIM56-201ENST00000306085 A8MXQ7 604 aa13.91□□□□□ -0.18
TRIM56-201ENST00000306085 DNAJC3Q13217 504 aa13.91□□□□□ -0.18
TRIM56-201ENST00000306085 SUPT20HL1Q3ZLR7 823 aa13.91□□□□□ -0.18
Retrieved 100 of 20,778 RNA–protein pairs in 40.5 ms