RNA–Protein interactions for RNA: ENST00000306042.9

PTPRE-202, Transcript of protein tyrosine phosphatase, receptor type E, humanhuman

TSL 1 (best) BASIC

Gene PTPRE, Length 4,957 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRE-202ENST00000306042 APOL1O14791 398 aa9.74□□□□□ -0.85
PTPRE-202ENST00000306042 BUB1BO60566 1050 aaPredicted RBP9.74□□□□□ -0.85
PTPRE-202ENST00000306042 ACRP10323 421 aa9.74□□□□□ -0.85
PTPRE-202ENST00000306042 ZNF200P98182 395 aaPredicted RBP9.74□□□□□ -0.85
PTPRE-202ENST00000306042 GUCY2DQ02846 1103 aa9.74□□□□□ -0.85
PTPRE-202ENST00000306042 KRT71Q3SY84 523 aa9.74□□□□□ -0.85
PTPRE-202ENST00000306042 RAPH1Q70E73 1250 aa9.74□□□□□ -0.85
PTPRE-202ENST00000306042 EFHBQ8N7U6 833 aa9.74□□□□□ -0.85
PTPRE-202ENST00000306042 TMEM161BQ8NDZ6 487 aa9.74□□□□□ -0.85
PTPRE-202ENST00000306042 ATRIPQ8WXE1 791 aa9.74□□□□□ -0.85
PTPRE-202ENST00000306042 CDK5RAP1Q96SZ6 601 aaKnown RBP9.74□□□□□ -0.85
PTPRE-202ENST00000306042 MAGEB5Q9BZ81 275 aa9.74□□□□□ -0.85
PTPRE-202ENST00000306042 VAV3Q9UKW4 847 aa9.74□□□□□ -0.85
PTPRE-202ENST00000306042 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP9.74□□□□□ -0.85
PTPRE-202ENST00000306042 SLC12A8A0AV02 714 aa9.74□□□□□ -0.85
PTPRE-202ENST00000306042 CCDC66A2RUB6 948 aa9.74□□□□□ -0.85
PTPRE-202ENST00000306042 M0QYT0 321 aa9.74□□□□□ -0.85
PTPRE-202ENST00000306042 NCAM2O15394 837 aa9.74□□□□□ -0.85
PTPRE-202ENST00000306042 CXCL14O95715 111 aa9.74□□□□□ -0.85
PTPRE-202ENST00000306042 PAMP19021 973 aa9.74□□□□□ -0.85
PTPRE-202ENST00000306042 MX2P20592 715 aa9.74□□□□□ -0.85
PTPRE-202ENST00000306042 PAX3P23760 479 aa9.74□□□□□ -0.85
PTPRE-202ENST00000306042 BST2Q10589 180 aaKnown RBP9.74□□□□□ -0.85
PTPRE-202ENST00000306042 ZNF177Q13360 481 aaPredicted RBP9.74□□□□□ -0.85
PTPRE-202ENST00000306042 SCLYQ96I15 445 aa9.74□□□□□ -0.85
PTPRE-202ENST00000306042 WNT8AQ9H1J5 351 aa9.74□□□□□ -0.85
PTPRE-202ENST00000306042 WDCPQ9H6R7 721 aa9.74□□□□□ -0.85
PTPRE-202ENST00000306042 CDC23Q9UJX2 597 aa9.74□□□□□ -0.85
PTPRE-202ENST00000306042 TRAF3IP3Q9Y228 551 aa9.74□□□□□ -0.85
PTPRE-202ENST00000306042 F5H5T6 163 aa9.73□□□□□ -0.85
PTPRE-202ENST00000306042 B4GALT5O43286 388 aa9.73□□□□□ -0.85
PTPRE-202ENST00000306042 ZNF189O75820 626 aaPredicted RBP9.73□□□□□ -0.85
PTPRE-202ENST00000306042 F9P00740 461 aa9.73□□□□□ -0.85
PTPRE-202ENST00000306042 INHBAP08476 426 aa9.73□□□□□ -0.85
PTPRE-202ENST00000306042 ARF4P18085 180 aaPredicted RBP9.73□□□□□ -0.85
PTPRE-202ENST00000306042 RPL9P32969 192 aaKnown RBP9.73□□□□□ -0.85
PTPRE-202ENST00000306042 NDST1P52848 882 aa9.73□□□□□ -0.85
PTPRE-202ENST00000306042 SLC18A3Q16572 532 aa9.73□□□□□ -0.85
PTPRE-202ENST00000306042 BBS9Q3SYG4 887 aa9.73□□□□□ -0.85
PTPRE-202ENST00000306042 MICALCLQ6ZW33 695 aa9.73□□□□□ -0.85
PTPRE-202ENST00000306042 RBM23Q86U06 439 aaKnown RBP9.73□□□□□ -0.85
PTPRE-202ENST00000306042 NOP9Q86U38 636 aaKnown RBP9.73□□□□□ -0.85
PTPRE-202ENST00000306042 ATPAF2Q8N5M1 289 aa9.73□□□□□ -0.85
PTPRE-202ENST00000306042 RNF10Q8N5U6 811 aaKnown RBP9.73□□□□□ -0.85
PTPRE-202ENST00000306042 DBF4BQ8NFT6 615 aa9.73□□□□□ -0.85
PTPRE-202ENST00000306042 DDI1Q8WTU0 396 aa9.73□□□□□ -0.85
PTPRE-202ENST00000306042 SMARCD1Q96GM5 515 aa9.73□□□□□ -0.85
PTPRE-202ENST00000306042 TLE6Q9H808 572 aa9.73□□□□□ -0.85
PTPRE-202ENST00000306042 DMAP1Q9NPF5 467 aaPredicted RBP9.73□□□□□ -0.85
PTPRE-202ENST00000306042 METTL5Q9NRN9 209 aaKnown RBP9.73□□□□□ -0.85
PTPRE-202ENST00000306042 ITGB4P16144 1822 aa9.73□□□□□ -0.85
PTPRE-202ENST00000306042 NT5C1B-RDH14C9J2C7 533 aa9.73□□□□□ -0.85
PTPRE-202ENST00000306042 SETSIPP0DME0 302 aa9.73□□□□□ -0.85
PTPRE-202ENST00000306042 HPDP32754 393 aaPredicted RBP9.73□□□□□ -0.85
PTPRE-202ENST00000306042 KPNA1P52294 538 aaPredicted RBP9.73□□□□□ -0.85
PTPRE-202ENST00000306042 GTF2BQ00403 316 aa9.73□□□□□ -0.85
PTPRE-202ENST00000306042 ZNF792Q3KQV3 632 aa9.73□□□□□ -0.85
PTPRE-202ENST00000306042 PABPC1LQ4VXU2 614 aaKnown RBP9.73□□□□□ -0.85
PTPRE-202ENST00000306042 RABGAP1LQ5R372 815 aa9.73□□□□□ -0.85
PTPRE-202ENST00000306042 TTI2Q6NXR4 508 aa9.73□□□□□ -0.85
PTPRE-202ENST00000306042 LLGL2Q6P1M3 1020 aa9.73□□□□□ -0.85
PTPRE-202ENST00000306042 KIAA0895Q8NCT3 520 aa9.73□□□□□ -0.85
PTPRE-202ENST00000306042 FBXO22Q8NEZ5 403 aa9.73□□□□□ -0.85
PTPRE-202ENST00000306042 FAM114A2Q9NRY5 505 aa9.73□□□□□ -0.85
PTPRE-202ENST00000306042 RTN3O95197 1032 aaPredicted RBP9.73□□□□□ -0.85
PTPRE-202ENST00000306042 SPATA31C1P0DKV0 1188 aa9.73□□□□□ -0.85
PTPRE-202ENST00000306042 YWHAQP27348 245 aa9.73□□□□□ -0.85
PTPRE-202ENST00000306042 TKTL1P51854 596 aa9.73□□□□□ -0.85
PTPRE-202ENST00000306042 PID1Q7Z2X4 250 aa9.73□□□□□ -0.85
PTPRE-202ENST00000306042 TSEN34Q9BSV6 310 aaKnown RBP9.73□□□□□ -0.85
PTPRE-202ENST00000306042 AP1M1Q9BXS5 423 aa9.73□□□□□ -0.85
PTPRE-202ENST00000306042 PFDN4Q9NQP4 134 aa9.73□□□□□ -0.85
PTPRE-202ENST00000306042 AGPAT5Q9NUQ2 364 aa9.73□□□□□ -0.85
PTPRE-202ENST00000306042 MAFBQ9Y5Q3 323 aaPredicted RBP9.73□□□□□ -0.85
PTPRE-202ENST00000306042 C5P01031 1676 aa9.73□□□□□ -0.85
PTPRE-202ENST00000306042 CHD4Q14839 1912 aa9.73□□□□□ -0.85
PTPRE-202ENST00000306042 SSU72P8A0A1W2PR75 194 aa9.73□□□□□ -0.85
PTPRE-202ENST00000306042 PON1P27169 355 aa9.73□□□□□ -0.85
PTPRE-202ENST00000306042 CTNNA1P35221 906 aaKnown RBP9.73□□□□□ -0.85
PTPRE-202ENST00000306042 GALCP54803 685 aa9.73□□□□□ -0.85
PTPRE-202ENST00000306042 MAP7D1Q3KQU3 841 aa9.73□□□□□ -0.85
PTPRE-202ENST00000306042 DCLRE1AQ6PJP8 1040 aa9.73□□□□□ -0.85
PTPRE-202ENST00000306042 PXYLP1Q8TE99 480 aa9.73□□□□□ -0.85
PTPRE-202ENST00000306042 GIPC2Q8TF65 315 aa9.73□□□□□ -0.85
PTPRE-202ENST00000306042 NIFKQ9BYG3 293 aaKnown RBP9.73□□□□□ -0.85
PTPRE-202ENST00000306042 ARHGAP39Q9C0H5 1083 aa9.73□□□□□ -0.85
PTPRE-202ENST00000306042 TMEM117Q9H0C3 514 aa9.73□□□□□ -0.85
PTPRE-202ENST00000306042 ANGPTL3Q9Y5C1 460 aa9.73□□□□□ -0.85
PTPRE-202ENST00000306042 CASZ1Q86V15 1759 aa9.73□□□□□ -0.85
PTPRE-202ENST00000306042 SNED1Q8TER0 1413 aa9.72□□□□□ -0.85
PTPRE-202ENST00000306042 FOXN3O00409 490 aaPredicted RBP9.72□□□□□ -0.85
PTPRE-202ENST00000306042 DYNC1I1O14576 645 aa9.72□□□□□ -0.85
PTPRE-202ENST00000306042 PLTPP55058 493 aa9.72□□□□□ -0.85
PTPRE-202ENST00000306042 DRP2Q13474 957 aa9.72□□□□□ -0.85
PTPRE-202ENST00000306042 PSMD5Q16401 504 aa9.72□□□□□ -0.85
PTPRE-202ENST00000306042 PLPP4Q5VZY2 271 aa9.72□□□□□ -0.85
PTPRE-202ENST00000306042 CSGALNACT1Q8TDX6 532 aa9.72□□□□□ -0.85
PTPRE-202ENST00000306042 MTMR8Q96EF0 704 aa9.72□□□□□ -0.85
PTPRE-202ENST00000306042 NUDCD1Q96RS6 583 aa9.72□□□□□ -0.85
PTPRE-202ENST00000306042 CERS4Q9HA82 394 aa9.72□□□□□ -0.85
Retrieved 100 of 20,778 RNA–protein pairs in 54.7 ms