RNA–Protein interactions for RNA: ENST00000303407.11

BRD3-201, Transcript of bromodomain containing 3, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene BRD3, Length 5,652 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRD3-201ENST00000303407 ELMO2Q96JJ3 720 aa17.11■□□□□ 0.33
BRD3-201ENST00000303407 AIPL1Q9NZN9 384 aa17.11■□□□□ 0.33
BRD3-201ENST00000303407 GZMAP12544 262 aa17.11■□□□□ 0.33
BRD3-201ENST00000303407 EFHC1Q5JVL4 640 aa17.11■□□□□ 0.33
BRD3-201ENST00000303407 ANGPTL8Q6UXH0 198 aa17.11■□□□□ 0.33
BRD3-201ENST00000303407 MTMR8Q96EF0 704 aa17.11■□□□□ 0.33
BRD3-201ENST00000303407 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP17.11■□□□□ 0.331e-6■■■□□ 19.2
BRD3-201ENST00000303407 UBR1Q8IWV7 1749 aa17.11■□□□□ 0.33
BRD3-201ENST00000303407 CCL15-CCL14A0A0B4J2E2 113 aa17.1■□□□□ 0.33
BRD3-201ENST00000303407 E2F8A0AVK6 867 aa17.1■□□□□ 0.33
BRD3-201ENST00000303407 CCL15Q16663 113 aa17.1■□□□□ 0.33
BRD3-201ENST00000303407 SLC5A5Q92911 643 aa17.1■□□□□ 0.33
BRD3-201ENST00000303407 ZBED2Q9BTP6 218 aa17.1■□□□□ 0.33
BRD3-201ENST00000303407 WHRNQ9P202 907 aa17.1■□□□□ 0.33
BRD3-201ENST00000303407 SIGLEC1Q9BZZ2 1709 aa17.1■□□□□ 0.33
BRD3-201ENST00000303407 FAM237AA0A1B0GTK4 181 aa17.1■□□□□ 0.33
BRD3-201ENST00000303407 EIF4E1BA6NMX2 242 aaKnown RBP17.1■□□□□ 0.33
BRD3-201ENST00000303407 SNRPAP09012 282 aaKnown RBP17.1■□□□□ 0.33
BRD3-201ENST00000303407 MAPTP10636 758 aaKnown RBP17.1■□□□□ 0.33
BRD3-201ENST00000303407 MCF2P10911 925 aa17.1■□□□□ 0.33
BRD3-201ENST00000303407 KRT35Q92764 455 aa17.1■□□□□ 0.33
BRD3-201ENST00000303407 MTMR9Q96QG7 549 aa17.1■□□□□ 0.33
BRD3-201ENST00000303407 CETPP11597 493 aa17.1■□□□□ 0.33
BRD3-201ENST00000303407 HOXD10P28358 340 aa17.1■□□□□ 0.33
BRD3-201ENST00000303407 OTOP1Q7RTM1 612 aa17.1■□□□□ 0.33
BRD3-201ENST00000303407 RRN3P2A6NIE6 340 aa17.1■□□□□ 0.33
BRD3-201ENST00000303407 CCT8L1PA6NM43 557 aa17.1■□□□□ 0.33
BRD3-201ENST00000303407 ARHGEF19Q8IW93 802 aa17.1■□□□□ 0.33
BRD3-201ENST00000303407 TSPYL2Q9H2G4 693 aaPredicted RBP17.1■□□□□ 0.33
BRD3-201ENST00000303407 MANSC1Q9H8J5 431 aa17.1■□□□□ 0.33
BRD3-201ENST00000303407 SEC23IPQ9Y6Y8 1000 aaKnown RBP17.1■□□□□ 0.33
BRD3-201ENST00000303407 GLI1P08151 1106 aa17.1■□□□□ 0.33
BRD3-201ENST00000303407 CYP2B6P20813 491 aa17.1■□□□□ 0.33
BRD3-201ENST00000303407 AMHR2Q16671 573 aa17.1■□□□□ 0.33
BRD3-201ENST00000303407 AGGF1Q8N302 714 aaeCLIP17.1■□□□□ 0.333e-12■■□□□ 12.6
BRD3-201ENST00000303407 ULK4Q96C45 1275 aa17.1■□□□□ 0.33
BRD3-201ENST00000303407 EGFL8Q99944 293 aa17.1■□□□□ 0.33
BRD3-201ENST00000303407 IFT172Q9UG01 1749 aa17.09■□□□□ 0.33
BRD3-201ENST00000303407 MYBPC2Q14324 1141 aa17.09■□□□□ 0.33
BRD3-201ENST00000303407 TEDDM1Q5T9Z0 273 aa17.09■□□□□ 0.33
BRD3-201ENST00000303407 APOBEC3HQ6NTF7 200 aaKnown RBP17.09■□□□□ 0.33
BRD3-201ENST00000303407 SPDYE1Q8NFV5 336 aaPredicted RBP17.09■□□□□ 0.33
BRD3-201ENST00000303407 SH3TC2Q8TF17 1288 aa17.09■□□□□ 0.33
BRD3-201ENST00000303407 CAVIN3Q969G5 261 aa17.09■□□□□ 0.33
BRD3-201ENST00000303407 TSC22D3Q99576 134 aa17.09■□□□□ 0.33
BRD3-201ENST00000303407 C20orf96Q9NUD7 363 aaPredicted RBP17.09■□□□□ 0.33
BRD3-201ENST00000303407 NEMP1O14524 444 aa17.09■□□□□ 0.33
BRD3-201ENST00000303407 PGK2P07205 417 aa17.09■□□□□ 0.33
BRD3-201ENST00000303407 CLCN3P51790 818 aa17.09■□□□□ 0.33
BRD3-201ENST00000303407 USP10Q14694 798 aaKnown RBP17.09■□□□□ 0.33
BRD3-201ENST00000303407 PDCD2LQ9BRP1 358 aa17.09■□□□□ 0.33
BRD3-201ENST00000303407 OSBPL1AQ9BXW6 950 aa17.09■□□□□ 0.33
BRD3-201ENST00000303407 PTPRN2Q92932 1015 aa17.09■□□□□ 0.33
BRD3-201ENST00000303407 CPB2Q96IY4 423 aa17.09■□□□□ 0.33
BRD3-201ENST00000303407 RMDN2Q96LZ7 410 aa17.09■□□□□ 0.33
BRD3-201ENST00000303407 SPON1Q9HCB6 807 aa17.09■□□□□ 0.33
BRD3-201ENST00000303407 TRAPPC3O43617 180 aa17.09■□□□□ 0.33
BRD3-201ENST00000303407 ANP32DO95626 131 aa17.09■□□□□ 0.33
BRD3-201ENST00000303407 RRM1P23921 792 aa17.09■□□□□ 0.33
BRD3-201ENST00000303407 MAPRE2Q15555 327 aa17.09■□□□□ 0.33
BRD3-201ENST00000303407 ANO4Q32M45 955 aa17.09■□□□□ 0.33
BRD3-201ENST00000303407 C4orf22Q6V702 233 aa17.09■□□□□ 0.33
BRD3-201ENST00000303407 ZFPM1Q8IX07 1006 aa17.09■□□□□ 0.33
BRD3-201ENST00000303407 LRRC34Q8IZ02 419 aa17.09■□□□□ 0.33
BRD3-201ENST00000303407 FRMD8P1Q9BZ68 369 aaPredicted RBP17.09■□□□□ 0.33
BRD3-201ENST00000303407 FAM8A1Q9UBU6 413 aa17.09■□□□□ 0.33
BRD3-201ENST00000303407 HMBSP08397 361 aa17.08■□□□□ 0.33
BRD3-201ENST00000303407 TAF6P49848 677 aa17.08■□□□□ 0.33
BRD3-201ENST00000303407 TFDP3Q5H9I0 405 aa17.08■□□□□ 0.33
BRD3-201ENST00000303407 KCNK18Q7Z418 384 aa17.08■□□□□ 0.33
BRD3-201ENST00000303407 FBXO16Q8IX29 292 aaPredicted RBP17.08■□□□□ 0.33
BRD3-201ENST00000303407 ZC3H15Q8WU90 426 aaKnown RBP17.08■□□□□ 0.33
BRD3-201ENST00000303407 TASP1Q9H6P5 420 aa17.08■□□□□ 0.33
BRD3-201ENST00000303407 NDFIP2Q9NV92 336 aa17.08■□□□□ 0.33
BRD3-201ENST00000303407 ATRNO75882 1429 aa17.08■□□□□ 0.33
BRD3-201ENST00000303407 POLBP06746 335 aa17.08■□□□□ 0.33
BRD3-201ENST00000303407 KCNT1Q5JUK3 1230 aa17.08■□□□□ 0.33
BRD3-201ENST00000303407 ZNF484Q5JVG2 852 aa17.08■□□□□ 0.33
BRD3-201ENST00000303407 WDR49Q8IV35 697 aa17.08■□□□□ 0.33
BRD3-201ENST00000303407 ICA1LQ8NDH6 482 aa17.08■□□□□ 0.33
BRD3-201ENST00000303407 TFB1MQ8WVM0 346 aaKnown RBP17.08■□□□□ 0.33
BRD3-201ENST00000303407 SNX19Q92543 992 aa17.08■□□□□ 0.33
BRD3-201ENST00000303407 KCNQ5Q9NR82 932 aa17.08■□□□□ 0.33
BRD3-201ENST00000303407 ARHGEF38Q9NXL2 777 aa17.08■□□□□ 0.33
BRD3-201ENST00000303407 LMCD1Q9NZU5 365 aa17.08■□□□□ 0.33
BRD3-201ENST00000303407 DMGDHQ9UI17 866 aaKnown RBP17.08■□□□□ 0.33
BRD3-201ENST00000303407 MON2Q7Z3U7 1717 aa17.08■□□□□ 0.32
BRD3-201ENST00000303407 TADA2AO75478 443 aa17.08■□□□□ 0.32
BRD3-201ENST00000303407 C11orf63Q6NUN7 778 aa17.08■□□□□ 0.32
BRD3-201ENST00000303407 CCDC124Q96CT7 223 aaKnown RBP17.08■□□□□ 0.32
BRD3-201ENST00000303407 MTO1Q9Y2Z2 717 aaKnown RBP17.08■□□□□ 0.32
BRD3-201ENST00000303407 SIPA1L2Q9P2F8 1722 aaPredicted RBP17.08■□□□□ 0.32
BRD3-201ENST00000303407 PNPLA4P41247 253 aa17.08■□□□□ 0.32
BRD3-201ENST00000303407 LRRC8EQ6NSJ5 796 aa17.08■□□□□ 0.32
BRD3-201ENST00000303407 KIF2BQ8N4N8 673 aa17.08■□□□□ 0.32
BRD3-201ENST00000303407 FAM163AQ96GL9 167 aaPredicted RBP17.08■□□□□ 0.32
BRD3-201ENST00000303407 KLK14Q9P0G3 267 aa17.08■□□□□ 0.32
BRD3-201ENST00000303407 GRIK5Q16478 980 aa17.07■□□□□ 0.32
BRD3-201ENST00000303407 IL17AQ16552 155 aa17.07■□□□□ 0.32
BRD3-201ENST00000303407 GLRA4Q5JXX5 417 aa17.07■□□□□ 0.32
Retrieved 100 of 20,778 RNA–protein pairs in 27.4 ms