RNA–Protein interactions for RNA: ENST00000301732.9

ABCA3-201, Transcript of ATP binding cassette subfamily A member 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene ABCA3, Length 6,609 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ABCA3-201ENST00000301732 KCNK10P57789 538 aa12.88□□□□□ -0.35
ABCA3-201ENST00000301732 MAPRE2Q15555 327 aa12.88□□□□□ -0.35
ABCA3-201ENST00000301732 POP1Q99575 1024 aaKnown RBP12.88□□□□□ -0.35
ABCA3-201ENST00000301732 DNAJC7Q99615 494 aa12.88□□□□□ -0.35
ABCA3-201ENST00000301732 TOPORSQ9NS56 1045 aaPredicted RBP12.88□□□□□ -0.35
ABCA3-201ENST00000301732 APEX2Q9UBZ4 518 aa12.88□□□□□ -0.35
ABCA3-201ENST00000301732 BGNP21810 368 aa12.87□□□□□ -0.35
ABCA3-201ENST00000301732 POU5F2Q8N7G0 328 aa12.87□□□□□ -0.35
ABCA3-201ENST00000301732 RBBP8NLQ8NC74 664 aaPredicted RBP12.87□□□□□ -0.35
ABCA3-201ENST00000301732 GRAMD1AQ96CP6 724 aa12.87□□□□□ -0.35
ABCA3-201ENST00000301732 CNGB3Q9NQW8 809 aa12.87□□□□□ -0.35
ABCA3-201ENST00000301732 DAPK2Q9UIK4 370 aa12.87□□□□□ -0.35
ABCA3-201ENST00000301732 COPG1Q9Y678 874 aaKnown RBP12.87□□□□□ -0.35
ABCA3-201ENST00000301732 GSG1L2A8MUP6 293 aa12.87□□□□□ -0.35
ABCA3-201ENST00000301732 RAP1GAPP47736 663 aa12.87□□□□□ -0.35
ABCA3-201ENST00000301732 DAB2IPQ5VWQ8 1189 aa12.87□□□□□ -0.35
ABCA3-201ENST00000301732 BLOC1S5Q8TDH9 187 aa12.87□□□□□ -0.35
ABCA3-201ENST00000301732 SCN3BQ9NY72 215 aa12.87□□□□□ -0.35
ABCA3-201ENST00000301732 SELENONQ9NZV5 590 aa12.87□□□□□ -0.35
ABCA3-201ENST00000301732 ZNF212Q9UDV6 495 aa12.87□□□□□ -0.35
ABCA3-201ENST00000301732 DNALI1O14645 258 aaPredicted RBP12.87□□□□□ -0.35
ABCA3-201ENST00000301732 NQO1P15559 274 aaKnown RBP12.87□□□□□ -0.35
ABCA3-201ENST00000301732 CORO7P57737 925 aa12.87□□□□□ -0.35
ABCA3-201ENST00000301732 DUOXA2Q1HG44 320 aa12.87□□□□□ -0.35
ABCA3-201ENST00000301732 PAN2Q504Q3 1202 aaKnown RBP12.87□□□□□ -0.35
ABCA3-201ENST00000301732 RC3H1Q5TC82 1133 aaKnown RBP12.87□□□□□ -0.35
ABCA3-201ENST00000301732 LUZP2Q86TE4 346 aa12.87□□□□□ -0.35
ABCA3-201ENST00000301732 KBTBD2Q8IY47 623 aa12.87□□□□□ -0.35
ABCA3-201ENST00000301732 TRPC4APQ8TEL6 797 aa12.87□□□□□ -0.35
ABCA3-201ENST00000301732 OTUB1Q96FW1 271 aaPredicted RBP12.87□□□□□ -0.35
ABCA3-201ENST00000301732 DHX36Q9H2U1 1008 aaKnown RBP12.87□□□□□ -0.35
ABCA3-201ENST00000301732 IMPAD1Q9NX62 359 aa12.87□□□□□ -0.35
ABCA3-201ENST00000301732 ARMCX1Q9P291 453 aa12.87□□□□□ -0.35
ABCA3-201ENST00000301732 MINPP1Q9UNW1 487 aa12.87□□□□□ -0.35
ABCA3-201ENST00000301732 ITSN2Q9NZM3 1697 aa12.87□□□□□ -0.35
ABCA3-201ENST00000301732 ABCC10Q5T3U5 1492 aa12.87□□□□□ -0.35
ABCA3-201ENST00000301732 P4HBP07237 508 aaKnown RBP12.87□□□□□ -0.35
ABCA3-201ENST00000301732 DNAL1Q4LDG9 190 aa12.87□□□□□ -0.35
ABCA3-201ENST00000301732 APPL2Q8NEU8 664 aa12.87□□□□□ -0.35
ABCA3-201ENST00000301732 TUBGCP3Q96CW5 907 aa12.87□□□□□ -0.35
ABCA3-201ENST00000301732 BPIFA3Q9BQP9 254 aa12.87□□□□□ -0.35
ABCA3-201ENST00000301732 PARVBQ9HBI1 364 aa12.87□□□□□ -0.35
ABCA3-201ENST00000301732 STAU2Q9NUL3 570 aaKnown RBP eCLIP12.87□□□□□ -0.35
ABCA3-201ENST00000301732 UTP6Q9NYH9 597 aaKnown RBP12.87□□□□□ -0.35
ABCA3-201ENST00000301732 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP12.87□□□□□ -0.35
ABCA3-201ENST00000301732 ALG6Q9Y672 507 aa12.87□□□□□ -0.35
ABCA3-201ENST00000301732 TBC1D12O60347 775 aa12.87□□□□□ -0.35
ABCA3-201ENST00000301732 NPTXRO95502 500 aa12.87□□□□□ -0.35
ABCA3-201ENST00000301732 HIST1H2AGP0C0S8 130 aaPredicted RBP12.87□□□□□ -0.35
ABCA3-201ENST00000301732 HIST1H2ADP20671 130 aa12.87□□□□□ -0.35
ABCA3-201ENST00000301732 TMEM179Q6ZVK1 233 aa12.87□□□□□ -0.35
ABCA3-201ENST00000301732 NLRP9Q7RTR0 991 aa12.87□□□□□ -0.35
ABCA3-201ENST00000301732 ARHGEF26Q96DR7 871 aa12.87□□□□□ -0.35
ABCA3-201ENST00000301732 HIST1H2AHQ96KK5 128 aa12.87□□□□□ -0.35
ABCA3-201ENST00000301732 CATSPER2Q96P56 530 aa12.87□□□□□ -0.35
ABCA3-201ENST00000301732 HIST1H2AJQ99878 128 aa12.87□□□□□ -0.35
ABCA3-201ENST00000301732 H2AFJQ9BTM1 129 aa12.87□□□□□ -0.35
ABCA3-201ENST00000301732 OSBPL8Q9BZF1 889 aa12.87□□□□□ -0.35
ABCA3-201ENST00000301732 AP1G2O75843 785 aa12.86□□□□□ -0.35
ABCA3-201ENST00000301732 RHOBTB1O94844 696 aa12.86□□□□□ -0.35
ABCA3-201ENST00000301732 UBOX5O94941 541 aa12.86□□□□□ -0.35
ABCA3-201ENST00000301732 TTC39BQ5VTQ0 682 aaPredicted RBP12.86□□□□□ -0.35
ABCA3-201ENST00000301732 GPAT2Q6NUI2 795 aa12.86□□□□□ -0.35
ABCA3-201ENST00000301732 SPATA2LQ8IUW3 424 aaPredicted RBP12.86□□□□□ -0.35
ABCA3-201ENST00000301732 HASPINQ8TF76 798 aa12.86□□□□□ -0.35
ABCA3-201ENST00000301732 QTRT2Q9H974 415 aaKnown RBP12.86□□□□□ -0.35
ABCA3-201ENST00000301732 CYP7B1O75881 506 aa12.86□□□□□ -0.35
ABCA3-201ENST00000301732 COPAP53621 1224 aa12.86□□□□□ -0.35
ABCA3-201ENST00000301732 NCOA4Q13772 614 aa12.86□□□□□ -0.35
ABCA3-201ENST00000301732 SUPT20HL1Q3ZLR7 823 aa12.86□□□□□ -0.35
ABCA3-201ENST00000301732 ELMOD1Q8N336 334 aa12.86□□□□□ -0.35
ABCA3-201ENST00000301732 HDHD2Q9H0R4 259 aa12.86□□□□□ -0.35
ABCA3-201ENST00000301732 RPAP3Q9H6T3 665 aaPredicted RBP12.86□□□□□ -0.35
ABCA3-201ENST00000301732 DYRK4Q9NR20 520 aa12.86□□□□□ -0.35
ABCA3-201ENST00000301732 ATP10DQ9P241 1426 aa12.86□□□□□ -0.35
ABCA3-201ENST00000301732 EFCAB14O75071 495 aa12.86□□□□□ -0.35
ABCA3-201ENST00000301732 CDH16O75309 829 aa12.86□□□□□ -0.35
ABCA3-201ENST00000301732 PRKCBP05771 671 aa12.86□□□□□ -0.35
ABCA3-201ENST00000301732 TBXAS1P24557 533 aaPredicted RBP12.86□□□□□ -0.35
ABCA3-201ENST00000301732 PSMB9P28065 219 aa12.86□□□□□ -0.35
ABCA3-201ENST00000301732 FMO5P49326 533 aa12.86□□□□□ -0.35
ABCA3-201ENST00000301732 RSBN1Q5VWQ0 802 aaPredicted RBP12.86□□□□□ -0.35
ABCA3-201ENST00000301732 TYW3Q6IPR3 259 aaKnown RBP12.86□□□□□ -0.35
ABCA3-201ENST00000301732 SYTL1Q8IYJ3 562 aa12.86□□□□□ -0.35
ABCA3-201ENST00000301732 PDLIM2Q96JY6 352 aa12.86□□□□□ -0.35
ABCA3-201ENST00000301732 MARK4Q96L34 752 aa12.86□□□□□ -0.35
ABCA3-201ENST00000301732 SPRTNQ9H040 489 aaPredicted RBP12.86□□□□□ -0.35
ABCA3-201ENST00000301732 PAIP1Q9H074 479 aaKnown RBP12.86□□□□□ -0.35
ABCA3-201ENST00000301732 C10orf88Q9H8K7 445 aa12.86□□□□□ -0.35
ABCA3-201ENST00000301732 MRPL39Q9NYK5 338 aaKnown RBP12.86□□□□□ -0.35
ABCA3-201ENST00000301732 C16orf96A6NNT2 1141 aa12.86□□□□□ -0.35
ABCA3-201ENST00000301732 PTGES3LE9PB15 166 aa12.86□□□□□ -0.35
ABCA3-201ENST00000301732 GOLGA8TH3BQL2 631 aa12.86□□□□□ -0.35
ABCA3-201ENST00000301732 PIAS1O75925 651 aa12.86□□□□□ -0.35
ABCA3-201ENST00000301732 MMP10P09238 476 aa12.86□□□□□ -0.35
ABCA3-201ENST00000301732 RAB14P61106 215 aa12.86□□□□□ -0.35
ABCA3-201ENST00000301732 NR1I3Q14994 352 aa12.86□□□□□ -0.35
ABCA3-201ENST00000301732 CYP2R1Q6VVX0 501 aa12.86□□□□□ -0.35
ABCA3-201ENST00000301732 ANKRD7Q92527 254 aa12.86□□□□□ -0.35
ABCA3-201ENST00000301732 KCNK16Q96T55 309 aa12.86□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 19.1 ms