RNA–Protein interactions for RNA: ENST00000300862.7

HIF3A-204, Transcript of hypoxia inducible factor 3 subunit alpha, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene HIF3A, Length 2,551 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HIF3A-204ENST00000300862 PECAM1P16284 738 aaPredicted RBP13.62□□□□□ -0.23
HIF3A-204ENST00000300862 ICAM3P32942 547 aa13.62□□□□□ -0.23
HIF3A-204ENST00000300862 RAP1GAPP47736 663 aa13.62□□□□□ -0.23
HIF3A-204ENST00000300862 ITIH4Q14624 930 aa13.62□□□□□ -0.23
HIF3A-204ENST00000300862 ACCSLQ4AC99 568 aa13.62□□□□□ -0.23
HIF3A-204ENST00000300862 KCNT1Q5JUK3 1230 aa13.62□□□□□ -0.23
HIF3A-204ENST00000300862 NCAPG2Q86XI2 1143 aa13.62□□□□□ -0.23
HIF3A-204ENST00000300862 TRAPPC12Q8WVT3 735 aa13.62□□□□□ -0.23
HIF3A-204ENST00000300862 NSRP1Q9H0G5 558 aaKnown RBP13.62□□□□□ -0.23
HIF3A-204ENST00000300862 NOD2Q9HC29 1040 aa13.62□□□□□ -0.23
HIF3A-204ENST00000300862 NRBP2Q9NSY0 501 aa13.62□□□□□ -0.23
HIF3A-204ENST00000300862 RGS17Q9UGC6 210 aaPredicted RBP13.62□□□□□ -0.23
HIF3A-204ENST00000300862 LCTP09848 1927 aa13.62□□□□□ -0.23
HIF3A-204ENST00000300862 IGKV6D-21A0A0A0MT36 114 aa13.62□□□□□ -0.23
HIF3A-204ENST00000300862 SLC8A1P32418 973 aa13.62□□□□□ -0.23
HIF3A-204ENST00000300862 STX2P32856 288 aa13.62□□□□□ -0.23
HIF3A-204ENST00000300862 ABCD1P33897 745 aa13.62□□□□□ -0.23
HIF3A-204ENST00000300862 SPOCD1Q6ZMY3 1216 aa13.62□□□□□ -0.23
HIF3A-204ENST00000300862 RCOR2Q8IZ40 523 aa13.62□□□□□ -0.23
HIF3A-204ENST00000300862 THOC1Q96FV9 657 aaKnown RBP13.62□□□□□ -0.23
HIF3A-204ENST00000300862 FAXDC2Q96IV6 333 aa13.62□□□□□ -0.23
HIF3A-204ENST00000300862 TMEM134Q9H6X4 195 aa13.62□□□□□ -0.23
HIF3A-204ENST00000300862 KIF9Q9HAQ2 790 aa13.62□□□□□ -0.23
HIF3A-204ENST00000300862 POLIQ9UNA4 740 aa13.62□□□□□ -0.23
HIF3A-204ENST00000300862 SLC12A4Q9UP95 1085 aa13.62□□□□□ -0.23
HIF3A-204ENST00000300862 RASA4BC9J798 803 aa13.61□□□□□ -0.23
HIF3A-204ENST00000300862 B4GALT5O43286 388 aa13.61□□□□□ -0.23
HIF3A-204ENST00000300862 RASA4O43374 803 aa13.61□□□□□ -0.23
HIF3A-204ENST00000300862 CDH16O75309 829 aa13.61□□□□□ -0.23
HIF3A-204ENST00000300862 UBOX5O94941 541 aa13.61□□□□□ -0.23
HIF3A-204ENST00000300862 TJP3O95049 919 aa13.61□□□□□ -0.23
HIF3A-204ENST00000300862 ATP5DP30049 168 aa13.61□□□□□ -0.23
HIF3A-204ENST00000300862 GAD2Q05329 585 aa13.61□□□□□ -0.23
HIF3A-204ENST00000300862 TRPC3Q13507 836 aa13.61□□□□□ -0.23
HIF3A-204ENST00000300862 DENND1BQ6P3S1 775 aa13.61□□□□□ -0.23
HIF3A-204ENST00000300862 KIRREL3Q8IZU9 778 aa13.61□□□□□ -0.23
HIF3A-204ENST00000300862 ZCCHC9Q8N567 271 aaKnown RBP13.61□□□□□ -0.23
HIF3A-204ENST00000300862 UBR7Q8N806 425 aa13.61□□□□□ -0.23
HIF3A-204ENST00000300862 DNERQ8NFT8 737 aa13.61□□□□□ -0.23
HIF3A-204ENST00000300862 TGS1Q96RS0 853 aaKnown RBP13.61□□□□□ -0.23
HIF3A-204ENST00000300862 ZWILCHQ9H900 591 aa13.61□□□□□ -0.23
HIF3A-204ENST00000300862 USP15Q9Y4E8 981 aaPredicted RBP13.61□□□□□ -0.23
HIF3A-204ENST00000300862 TCRBV5S1A1TA0A578 114 aa13.61□□□□□ -0.23
HIF3A-204ENST00000300862 CCDC189A1A4V9 331 aa13.61□□□□□ -0.23
HIF3A-204ENST00000300862 CSDE1O75534 798 aaKnown RBP13.61□□□□□ -0.23
HIF3A-204ENST00000300862 TOM1L1O75674 476 aa13.61□□□□□ -0.23
HIF3A-204ENST00000300862 ARIH2O95376 493 aa13.61□□□□□ -0.23
HIF3A-204ENST00000300862 CD19P15391 556 aa13.61□□□□□ -0.23
HIF3A-204ENST00000300862 PAX7P23759 505 aa13.61□□□□□ -0.23
HIF3A-204ENST00000300862 RFC5P40937 340 aa13.61□□□□□ -0.23
HIF3A-204ENST00000300862 CETN2P41208 172 aa13.61□□□□□ -0.23
HIF3A-204ENST00000300862 CLNS1AP54105 237 aaKnown RBP13.61□□□□□ -0.23
HIF3A-204ENST00000300862 LAMTOR4Q0VGL1 99 aa13.61□□□□□ -0.23
HIF3A-204ENST00000300862 WDR72Q3MJ13 1102 aa13.61□□□□□ -0.23
HIF3A-204ENST00000300862 HSDL1Q3SXM5 330 aa13.61□□□□□ -0.23
HIF3A-204ENST00000300862 TBC1D1Q86TI0 1168 aaPredicted RBP13.61□□□□□ -0.23
HIF3A-204ENST00000300862 ERICH1Q86X53 443 aa13.61□□□□□ -0.23
HIF3A-204ENST00000300862 WDR49Q8IV35 697 aa13.61□□□□□ -0.23
HIF3A-204ENST00000300862 TMEM192Q8IY95 271 aa13.61□□□□□ -0.23
HIF3A-204ENST00000300862 TMEM35BQ8NCS4 154 aa13.61□□□□□ -0.23
HIF3A-204ENST00000300862 CKAP2Q8WWK9 683 aa13.61□□□□□ -0.23
HIF3A-204ENST00000300862 TBC1D31Q96DN5 1066 aa13.61□□□□□ -0.23
HIF3A-204ENST00000300862 RBM41Q96IZ5 413 aaKnown RBP13.61□□□□□ -0.23
HIF3A-204ENST00000300862 MRPL4Q9BYD3 311 aaKnown RBP13.61□□□□□ -0.23
HIF3A-204ENST00000300862 NIF3L1Q9GZT8 377 aa13.61□□□□□ -0.23
HIF3A-204ENST00000300862 EXOC1LA0A1B0GW35 172 aa13.6□□□□□ -0.23
HIF3A-204ENST00000300862 SGK1O00141 431 aa13.6□□□□□ -0.23
HIF3A-204ENST00000300862 FZD9O00144 591 aa13.6□□□□□ -0.23
HIF3A-204ENST00000300862 MAFO75444 373 aaPredicted RBP13.6□□□□□ -0.23
HIF3A-204ENST00000300862 PRKCBP05771 671 aa13.6□□□□□ -0.23
HIF3A-204ENST00000300862 PGK2P07205 417 aa13.6□□□□□ -0.23
HIF3A-204ENST00000300862 KRT19P08727 400 aa13.6□□□□□ -0.23
HIF3A-204ENST00000300862 RFC1P35251 1148 aaPredicted RBP13.6□□□□□ -0.23
HIF3A-204ENST00000300862 CDH8P55286 799 aa13.6□□□□□ -0.23
HIF3A-204ENST00000300862 CRYMQ14894 314 aa13.6□□□□□ -0.23
HIF3A-204ENST00000300862 DUOXA2Q1HG44 320 aa13.6□□□□□ -0.23
HIF3A-204ENST00000300862 FAM47EQ6ZV65 393 aa13.6□□□□□ -0.23
HIF3A-204ENST00000300862 RHPN2Q8IUC4 686 aa13.6□□□□□ -0.23
HIF3A-204ENST00000300862 BBOF1Q8ND07 529 aa13.6□□□□□ -0.23
HIF3A-204ENST00000300862 TCP11Q8WWU5 503 aa13.6□□□□□ -0.23
HIF3A-204ENST00000300862 NLRP4Q96MN2 994 aa13.6□□□□□ -0.23
HIF3A-204ENST00000300862 ACO2Q99798 780 aaKnown RBP13.6□□□□□ -0.23
HIF3A-204ENST00000300862 BAIAP2L1Q9UHR4 511 aa13.6□□□□□ -0.23
HIF3A-204ENST00000300862 DNALI1O14645 258 aaPredicted RBP13.6□□□□□ -0.23
HIF3A-204ENST00000300862 OAS1P00973 400 aaKnown RBP13.6□□□□□ -0.23
HIF3A-204ENST00000300862 CALB1P05937 261 aa13.6□□□□□ -0.23
HIF3A-204ENST00000300862 RPSAP08865 295 aaKnown RBP13.6□□□□□ -0.23
HIF3A-204ENST00000300862 GCAP28676 217 aa13.6□□□□□ -0.23
HIF3A-204ENST00000300862 FOXN2P32314 431 aa13.6□□□□□ -0.23
HIF3A-204ENST00000300862 ZNF699Q32M78 642 aa13.6□□□□□ -0.23
HIF3A-204ENST00000300862 EAPPQ56P03 285 aaPredicted RBP13.6□□□□□ -0.23
HIF3A-204ENST00000300862 ZPBP2Q6X784 338 aa13.6□□□□□ -0.23
HIF3A-204ENST00000300862 ANKMY2Q8IV38 441 aa13.6□□□□□ -0.23
HIF3A-204ENST00000300862 ALLCQ8N6M5 410 aa13.6□□□□□ -0.23
HIF3A-204ENST00000300862 EMC1Q8N766 993 aa13.6□□□□□ -0.23
HIF3A-204ENST00000300862 CHST13Q8NET6 341 aa13.6□□□□□ -0.23
HIF3A-204ENST00000300862 JOSD2Q8TAC2 188 aa13.6□□□□□ -0.23
HIF3A-204ENST00000300862 SEPT1Q8WYJ6 367 aa13.6□□□□□ -0.23
HIF3A-204ENST00000300862 SPOCK2Q92563 424 aa13.6□□□□□ -0.23
HIF3A-204ENST00000300862 STAMBPL1Q96FJ0 436 aa13.6□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 56.9 ms