RNA–Protein interactions for RNA: ENST00000299345.10

CDH8-201, Transcript of cadherin 8, humanhuman

TSL 5 BASIC

Gene CDH8, Length 3,728 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH8-201ENST00000299345 TPX2Q9ULW0 747 aaKnown RBP14.36□□□□□ -0.11
CDH8-201ENST00000299345 CNTN6Q9UQ52 1028 aa14.36□□□□□ -0.11
CDH8-201ENST00000299345 CCT8L1PA6NM43 557 aa14.36□□□□□ -0.11
CDH8-201ENST00000299345 LIASO43766 372 aa14.36□□□□□ -0.11
CDH8-201ENST00000299345 HBP1O60381 514 aa14.36□□□□□ -0.11
CDH8-201ENST00000299345 SUN1O94901 812 aa14.36□□□□□ -0.11
CDH8-201ENST00000299345 CXCL8P10145 99 aa14.36□□□□□ -0.11
CDH8-201ENST00000299345 IVDP26440 423 aa14.36□□□□□ -0.11
CDH8-201ENST00000299345 RAP1GAPP47736 663 aa14.36□□□□□ -0.11
CDH8-201ENST00000299345 ORC1Q13415 861 aa14.36□□□□□ -0.11
CDH8-201ENST00000299345 TTLL4Q14679 1199 aa14.36□□□□□ -0.11
CDH8-201ENST00000299345 EAPPQ56P03 285 aaPredicted RBP14.36□□□□□ -0.11
CDH8-201ENST00000299345 CELF3Q5SZQ8 465 aaKnown RBP14.36□□□□□ -0.11
CDH8-201ENST00000299345 RHBDF2Q6PJF5 856 aa14.36□□□□□ -0.11
CDH8-201ENST00000299345 CENPUQ71F23 418 aa14.36□□□□□ -0.11
CDH8-201ENST00000299345 ATXN2LQ8WWM7 1075 aaKnown RBP14.36□□□□□ -0.11
CDH8-201ENST00000299345 GPR20Q99678 358 aa14.36□□□□□ -0.11
CDH8-201ENST00000299345 MAK16Q9BXY0 300 aaKnown RBP14.36□□□□□ -0.11
CDH8-201ENST00000299345 CPSF3Q9UKF6 684 aaKnown RBP14.36□□□□□ -0.11
CDH8-201ENST00000299345 POLIQ9UNA4 740 aa14.36□□□□□ -0.11
CDH8-201ENST00000299345 VGLL3A8MV65 326 aa14.35□□□□□ -0.11
CDH8-201ENST00000299345 GOLGA8MH3BSY2 632 aa14.35□□□□□ -0.11
CDH8-201ENST00000299345 ASAP2O43150 1006 aa14.35□□□□□ -0.11
CDH8-201ENST00000299345 DDNO94850 711 aaPredicted RBP14.35□□□□□ -0.11
CDH8-201ENST00000299345 TCF4P15884 667 aa14.35□□□□□ -0.11
CDH8-201ENST00000299345 PHKA2P46019 1235 aa14.35□□□□□ -0.11
CDH8-201ENST00000299345 GRM1Q13255 1194 aa14.35□□□□□ -0.11
CDH8-201ENST00000299345 LRRC38Q5VT99 294 aa14.35□□□□□ -0.11
CDH8-201ENST00000299345 C6orf89Q6UWU4 347 aa14.35□□□□□ -0.11
CDH8-201ENST00000299345 KAT2BQ92831 832 aa14.35□□□□□ -0.11
CDH8-201ENST00000299345 TTC25Q96NG3 672 aa14.35□□□□□ -0.11
CDH8-201ENST00000299345 FHDC1Q9C0D6 1143 aaPredicted RBP14.35□□□□□ -0.11
CDH8-201ENST00000299345 NAALADL1Q9UQQ1 740 aa14.35□□□□□ -0.11
CDH8-201ENST00000299345 MYH9P35579 1960 aaKnown RBP14.35□□□□□ -0.11
CDH8-201ENST00000299345 B4GALT5O43286 388 aa14.35□□□□□ -0.11
CDH8-201ENST00000299345 CSDE1O75534 798 aaKnown RBP14.35□□□□□ -0.11
CDH8-201ENST00000299345 OSBPP22059 807 aa14.35□□□□□ -0.11
CDH8-201ENST00000299345 CDH8P55286 799 aa14.35□□□□□ -0.11
CDH8-201ENST00000299345 COPS2P61201 443 aa14.35□□□□□ -0.11
CDH8-201ENST00000299345 KCNT1Q5JUK3 1230 aa14.35□□□□□ -0.11
CDH8-201ENST00000299345 EEF1DP3Q658K8 133 aa14.35□□□□□ -0.11
CDH8-201ENST00000299345 RFX6Q8HWS3 928 aa14.35□□□□□ -0.11
CDH8-201ENST00000299345 ZBED8Q8IZ13 594 aa14.35□□□□□ -0.11
CDH8-201ENST00000299345 KCTD6Q8NC69 237 aa14.35□□□□□ -0.11
CDH8-201ENST00000299345 COPS5Q92905 334 aa14.35□□□□□ -0.11
CDH8-201ENST00000299345 CALN1Q9BXU9 219 aa14.35□□□□□ -0.11
CDH8-201ENST00000299345 FGFR1OP2Q9NVK5 253 aa14.35□□□□□ -0.11
CDH8-201ENST00000299345 HGSO14964 777 aaPredicted RBP14.35□□□□□ -0.11
CDH8-201ENST00000299345 ARIH2O95376 493 aa14.35□□□□□ -0.11
CDH8-201ENST00000299345 PLCB4Q15147 1175 aa14.35□□□□□ -0.11
CDH8-201ENST00000299345 FAM133BQ5BKY9 247 aaKnown RBP14.35□□□□□ -0.11
CDH8-201ENST00000299345 DENND1BQ6P3S1 775 aa14.35□□□□□ -0.11
CDH8-201ENST00000299345 PPP1R21Q6ZMI0 780 aa14.35□□□□□ -0.11
CDH8-201ENST00000299345 ERO1BQ86YB8 467 aa14.35□□□□□ -0.11
CDH8-201ENST00000299345 TFAP2BQ92481 460 aa14.35□□□□□ -0.11
CDH8-201ENST00000299345 HEXIM2Q96MH2 286 aaKnown RBP14.35□□□□□ -0.11
CDH8-201ENST00000299345 TMEM121Q9BTD3 319 aa14.35□□□□□ -0.11
CDH8-201ENST00000299345 OSBPL7Q9BZF2 842 aa14.35□□□□□ -0.11
CDH8-201ENST00000299345 DNALI1O14645 258 aaPredicted RBP14.34□□□□□ -0.11
CDH8-201ENST00000299345 IL18RAPO95256 599 aa14.34□□□□□ -0.11
CDH8-201ENST00000299345 EDNRBP24530 442 aa14.34□□□□□ -0.11
CDH8-201ENST00000299345 ANKRD20A8PQ5CZ79 823 aa14.34□□□□□ -0.11
CDH8-201ENST00000299345 SCARA3Q6AZY7 606 aa14.34□□□□□ -0.11
CDH8-201ENST00000299345 ZNF317Q96PQ6 595 aaPredicted RBP14.34□□□□□ -0.11
CDH8-201ENST00000299345 ADAM7Q9H2U9 754 aa14.34□□□□□ -0.11
CDH8-201ENST00000299345 CST8O60676 142 aa14.34□□□□□ -0.11
CDH8-201ENST00000299345 ETS1P14921 441 aa14.34□□□□□ -0.11
CDH8-201ENST00000299345 CREB1P16220 341 aa14.34□□□□□ -0.11
CDH8-201ENST00000299345 RFC1P35251 1148 aaPredicted RBP14.34□□□□□ -0.11
CDH8-201ENST00000299345 ZNF132P52740 706 aa14.34□□□□□ -0.11
CDH8-201ENST00000299345 VCPP55072 806 aaKnown RBP14.34□□□□□ -0.11
CDH8-201ENST00000299345 IL9RQ01113 521 aa14.34□□□□□ -0.11
CDH8-201ENST00000299345 PDIA2Q13087 525 aaKnown RBP14.34□□□□□ -0.11
CDH8-201ENST00000299345 PLPPR4Q7Z2D5 763 aa14.34□□□□□ -0.11
CDH8-201ENST00000299345 ZCCHC9Q8N567 271 aaKnown RBP14.34□□□□□ -0.11
CDH8-201ENST00000299345 TTC13Q8NBP0 860 aa14.34□□□□□ -0.11
CDH8-201ENST00000299345 TRAF3IP1Q8TDR0 691 aaPredicted RBP14.34□□□□□ -0.11
CDH8-201ENST00000299345 HSPH1Q92598 858 aa14.34□□□□□ -0.11
CDH8-201ENST00000299345 GINS2Q9Y248 185 aa14.34□□□□□ -0.11
CDH8-201ENST00000299345 FOXO6A8MYZ6 492 aa14.33□□□□□ -0.11
CDH8-201ENST00000299345 M0QYV0 167 aa14.33□□□□□ -0.11
CDH8-201ENST00000299345 ITGB3P05106 788 aa14.33□□□□□ -0.11
CDH8-201ENST00000299345 SLC26A2P50443 739 aa14.33□□□□□ -0.11
CDH8-201ENST00000299345 GTF2A1P52655 376 aaPredicted RBP14.33□□□□□ -0.11
CDH8-201ENST00000299345 EMC1Q8N766 993 aa14.33□□□□□ -0.11
CDH8-201ENST00000299345 PRMT7Q9NVM4 692 aaPredicted RBP14.33□□□□□ -0.11
CDH8-201ENST00000299345 ERAP1Q9NZ08 941 aa14.33□□□□□ -0.11
CDH8-201ENST00000299345 PECAM1P16284 738 aaPredicted RBP14.33□□□□□ -0.12
CDH8-201ENST00000299345 DESP17661 470 aa14.33□□□□□ -0.12
CDH8-201ENST00000299345 SCTRP47872 440 aa14.33□□□□□ -0.12
CDH8-201ENST00000299345 ANKRD13AQ8IZ07 590 aa14.33□□□□□ -0.12
CDH8-201ENST00000299345 ZBTB10Q96DT7 871 aa14.33□□□□□ -0.12
CDH8-201ENST00000299345 TGS1Q96RS0 853 aaKnown RBP14.33□□□□□ -0.12
CDH8-201ENST00000299345 WDR35Q9P2L0 1181 aa14.33□□□□□ -0.12
CDH8-201ENST00000299345 PHIPQ8WWQ0 1821 aa14.33□□□□□ -0.12
CDH8-201ENST00000299345 TNFAIP2Q03169 654 aa14.33□□□□□ -0.12
CDH8-201ENST00000299345 ITIH4Q14624 930 aa14.33□□□□□ -0.12
CDH8-201ENST00000299345 ICE2Q659A1 982 aa14.33□□□□□ -0.12
CDH8-201ENST00000299345 CNPY4Q8N129 248 aa14.33□□□□□ -0.12
CDH8-201ENST00000299345 CLMNQ96JQ2 1002 aa14.33□□□□□ -0.12
Retrieved 100 of 20,778 RNA–protein pairs in 23 ms