RNA–Protein interactions for RNA: ENST00000298173.7

GTF2A1-201, Transcript of general transcription factor IIA subunit 1, humanhuman

TSL 2

Gene GTF2A1, Length 1,677 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF2A1-201ENST00000298173 CD19P15391 556 aa26.19■■□□□ 1.78
GTF2A1-201ENST00000298173 CDH5P33151 784 aaPredicted RBP26.19■■□□□ 1.78
GTF2A1-201ENST00000298173 WDR5P61964 334 aaKnown RBP26.19■■□□□ 1.78
GTF2A1-201ENST00000298173 BADQ92934 168 aa26.19■■□□□ 1.78
GTF2A1-201ENST00000298173 SUSD3Q96L08 255 aa26.19■■□□□ 1.78
GTF2A1-201ENST00000298173 SNX25Q9H3E2 840 aa26.19■■□□□ 1.78
GTF2A1-201ENST00000298173 SALL4Q9UJQ4 1053 aa26.19■■□□□ 1.78
GTF2A1-201ENST00000298173 GUCA1BQ9UMX6 200 aa26.19■■□□□ 1.78
GTF2A1-201ENST00000298173 MED7O43513 233 aa26.19■■□□□ 1.78
GTF2A1-201ENST00000298173 HCRTO43612 131 aa26.19■■□□□ 1.78
GTF2A1-201ENST00000298173 UPP2O95045 317 aa26.19■■□□□ 1.78
GTF2A1-201ENST00000298173 AMHP03971 560 aa26.19■■□□□ 1.78
GTF2A1-201ENST00000298173 NOMO3P69849 1222 aa26.19■■□□□ 1.78
GTF2A1-201ENST00000298173 CENPCQ03188 943 aa26.19■■□□□ 1.78
GTF2A1-201ENST00000298173 PPIGQ13427 754 aaKnown RBP eCLIP26.19■■□□□ 1.78
GTF2A1-201ENST00000298173 PAN2Q504Q3 1202 aaKnown RBP26.19■■□□□ 1.78
GTF2A1-201ENST00000298173 ACOT1Q86TX2 421 aa26.19■■□□□ 1.78
GTF2A1-201ENST00000298173 SPATA18Q8TC71 538 aa26.19■■□□□ 1.78
GTF2A1-201ENST00000298173 ZNF689Q96CS4 500 aaPredicted RBP26.19■■□□□ 1.78
GTF2A1-201ENST00000298173 LHX5Q9H2C1 402 aa26.19■■□□□ 1.78
GTF2A1-201ENST00000298173 O00370 1275 aa26.18■■□□□ 1.78
GTF2A1-201ENST00000298173 TUBB4AP04350 444 aa26.18■■□□□ 1.78
GTF2A1-201ENST00000298173 TMEM253P0C7T8 217 aa26.18■■□□□ 1.78
GTF2A1-201ENST00000298173 SSTR3P32745 418 aaPredicted RBP26.18■■□□□ 1.78
GTF2A1-201ENST00000298173 OR1G1P47890 313 aa26.18■■□□□ 1.78
GTF2A1-201ENST00000298173 DEFB103AP81534 67 aa26.18■■□□□ 1.78
GTF2A1-201ENST00000298173 SGO2Q562F6 1265 aa26.18■■□□□ 1.78
GTF2A1-201ENST00000298173 WDTC1Q8N5D0 677 aa26.18■■□□□ 1.78
GTF2A1-201ENST00000298173 C12orf29Q8N999 325 aa26.18■■□□□ 1.78
GTF2A1-201ENST00000298173 TMEM175Q9BSA9 504 aa26.18■■□□□ 1.78
GTF2A1-201ENST00000298173 PDCL3Q9H2J4 239 aa26.18■■□□□ 1.78
GTF2A1-201ENST00000298173 DPEP3Q9H4B8 488 aa26.18■■□□□ 1.78
GTF2A1-201ENST00000298173 WDR3Q9UNX4 943 aaKnown RBP eCLIP26.18■■□□□ 1.78
GTF2A1-201ENST00000298173 NRP1O14786 923 aa26.17■■□□□ 1.78
GTF2A1-201ENST00000298173 LSM8O95777 96 aaKnown RBP26.17■■□□□ 1.78
GTF2A1-201ENST00000298173 ALDH2P05091 517 aa26.17■■□□□ 1.78
GTF2A1-201ENST00000298173 PDGFRBP09619 1106 aa26.17■■□□□ 1.78
GTF2A1-201ENST00000298173 LHX1P48742 406 aa26.17■■□□□ 1.78
GTF2A1-201ENST00000298173 ETF1P62495 437 aaKnown RBP26.17■■□□□ 1.78
GTF2A1-201ENST00000298173 C7orf61Q8IZ16 206 aa26.17■■□□□ 1.78
GTF2A1-201ENST00000298173 HASPINQ8TF76 798 aa26.17■■□□□ 1.78
GTF2A1-201ENST00000298173 ZNF518BQ9C0D4 1074 aa26.17■■□□□ 1.78
GTF2A1-201ENST00000298173 RC3H2Q9HBD1 1191 aaKnown RBP26.17■■□□□ 1.78
GTF2A1-201ENST00000298173 HCSTQ9UBK5 93 aa26.17■■□□□ 1.78
GTF2A1-201ENST00000298173 TSC2P49815 1807 aa26.17■■□□□ 1.78
GTF2A1-201ENST00000298173 MYH10P35580 1976 aa26.16■■□□□ 1.78
GTF2A1-201ENST00000298173 I3L4J1 428 aa26.16■■□□□ 1.78
GTF2A1-201ENST00000298173 FPGSQ05932 587 aa26.16■■□□□ 1.78
GTF2A1-201ENST00000298173 LCLAT1Q6UWP7 414 aa26.16■■□□□ 1.78
GTF2A1-201ENST00000298173 PASD1Q8IV76 773 aa26.16■■□□□ 1.78
GTF2A1-201ENST00000298173 LRRC43Q8N309 656 aa26.16■■□□□ 1.78
GTF2A1-201ENST00000298173 RNF10Q8N5U6 811 aaKnown RBP26.16■■□□□ 1.78
GTF2A1-201ENST00000298173 CPA5Q8WXQ8 436 aa26.16■■□□□ 1.78
GTF2A1-201ENST00000298173 MYO1AQ9UBC5 1043 aa26.16■■□□□ 1.78
GTF2A1-201ENST00000298173 TIMM13Q9Y5L4 95 aaPredicted RBP26.16■■□□□ 1.78
GTF2A1-201ENST00000298173 PTPRSQ13332 1948 aa26.16■■□□□ 1.78
GTF2A1-201ENST00000298173 A0A0A6YYK5 440 aaPredicted RBP26.15■■□□□ 1.78
GTF2A1-201ENST00000298173 KIF2AO00139 706 aaPredicted RBP26.15■■□□□ 1.78
GTF2A1-201ENST00000298173 GALTP07902 379 aa26.15■■□□□ 1.78
GTF2A1-201ENST00000298173 ODC1P11926 461 aa26.15■■□□□ 1.78
GTF2A1-201ENST00000298173 TNNT1P13805 278 aa26.15■■□□□ 1.78
GTF2A1-201ENST00000298173 STILQ15468 1287 aa26.15■■□□□ 1.78
GTF2A1-201ENST00000298173 NAA35Q5VZE5 725 aa26.15■■□□□ 1.78
GTF2A1-201ENST00000298173 ARHGAP17Q68EM7 881 aa26.15■■□□□ 1.78
GTF2A1-201ENST00000298173 PHF13Q86YI8 300 aaPredicted RBP26.15■■□□□ 1.78
GTF2A1-201ENST00000298173 THAP2Q9H0W7 228 aa26.15■■□□□ 1.78
GTF2A1-201ENST00000298173 DSEQ9UL01 958 aa26.15■■□□□ 1.78
GTF2A1-201ENST00000298173 PAXBP1Q9Y5B6 917 aa26.15■■□□□ 1.78
GTF2A1-201ENST00000298173 TYMPP19971 482 aa26.15■■□□□ 1.78
GTF2A1-201ENST00000298173 SLC11A1P49279 550 aa26.15■■□□□ 1.78
GTF2A1-201ENST00000298173 TCEAL1Q15170 157 aa26.15■■□□□ 1.78
GTF2A1-201ENST00000298173 PPP1R26Q5T8A7 1209 aaPredicted RBP26.15■■□□□ 1.78
GTF2A1-201ENST00000298173 PPP1R2P3Q6NXS1 205 aa26.15■■□□□ 1.78
GTF2A1-201ENST00000298173 DENND1BQ6P3S1 775 aa26.15■■□□□ 1.78
GTF2A1-201ENST00000298173 ZNF365Q70YC5 407 aa26.15■■□□□ 1.78
GTF2A1-201ENST00000298173 OTOP2Q7RTS6 562 aa26.15■■□□□ 1.78
GTF2A1-201ENST00000298173 TMEM35BQ8NCS4 154 aa26.15■■□□□ 1.78
GTF2A1-201ENST00000298173 TNIP3Q96KP6 325 aa26.15■■□□□ 1.78
GTF2A1-201ENST00000298173 CWH43Q9H720 699 aa26.15■■□□□ 1.78
GTF2A1-201ENST00000298173 DDX43Q9NXZ2 648 aaKnown RBP26.15■■□□□ 1.78
GTF2A1-201ENST00000298173 KIF5CO60282 957 aa26.14■■□□□ 1.78
GTF2A1-201ENST00000298173 MICAL2O94851 1124 aa26.14■■□□□ 1.78
GTF2A1-201ENST00000298173 FGBP02675 491 aa26.14■■□□□ 1.78
GTF2A1-201ENST00000298173 ABCB4P21439 1286 aa26.14■■□□□ 1.78
GTF2A1-201ENST00000298173 EPHB4P54760 987 aa26.14■■□□□ 1.78
GTF2A1-201ENST00000298173 GPC5P78333 572 aa26.14■■□□□ 1.78
GTF2A1-201ENST00000298173 PKDCCQ504Y2 493 aa26.14■■□□□ 1.78
GTF2A1-201ENST00000298173 KIAA0319Q5VV43 1072 aa26.14■■□□□ 1.78
GTF2A1-201ENST00000298173 MCOLN2Q8IZK6 566 aa26.14■■□□□ 1.78
GTF2A1-201ENST00000298173 CTNNBL1Q8WYA6 563 aaPredicted RBP26.14■■□□□ 1.78
GTF2A1-201ENST00000298173 VCPIP1Q96JH7 1222 aa26.14■■□□□ 1.78
GTF2A1-201ENST00000298173 LPIN3Q9BQK8 851 aa26.14■■□□□ 1.78
GTF2A1-201ENST00000298173 RTP3Q9BQQ7 232 aa26.14■■□□□ 1.78
GTF2A1-201ENST00000298173 HTATIP2Q9BUP3 242 aa26.14■■□□□ 1.78
GTF2A1-201ENST00000298173 COLEC11Q9BWP8 271 aa26.14■■□□□ 1.78
GTF2A1-201ENST00000298173 MARCH5Q9NX47 278 aa26.14■■□□□ 1.78
GTF2A1-201ENST00000298173 PCDHB8Q9UN66 801 aa26.14■■□□□ 1.78
GTF2A1-201ENST00000298173 FAN1Q9Y2M0 1017 aa26.14■■□□□ 1.78
GTF2A1-201ENST00000298173 PRG3Q9Y2Y8 225 aaPredicted RBP26.14■■□□□ 1.78
GTF2A1-201ENST00000298173 ARHGEF37A1IGU5 675 aa26.13■■□□□ 1.77
Retrieved 100 of 20,778 RNA–protein pairs in 18.8 ms