RNA–Protein interactions for RNA: ENST00000297265.4

CHMP4C-201, Transcript of charged multivesicular body protein 4C, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CHMP4C, Length 1,866 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP4C-201ENST00000297265 OAS2P29728 719 aaKnown RBP14.4□□□□□ -0.1
CHMP4C-201ENST00000297265 LLGL1Q15334 1064 aa14.4□□□□□ -0.1
CHMP4C-201ENST00000297265 CNGA2Q16280 664 aa14.4□□□□□ -0.1
CHMP4C-201ENST00000297265 SEL1L2Q5TEA6 688 aa14.4□□□□□ -0.1
CHMP4C-201ENST00000297265 MFSD14CQ5VZR4 134 aa14.4□□□□□ -0.1
CHMP4C-201ENST00000297265 MAATS1Q7Z4T9 603 aa14.4□□□□□ -0.1
CHMP4C-201ENST00000297265 ERICH1Q86X53 443 aa14.4□□□□□ -0.1
CHMP4C-201ENST00000297265 C3orf20Q8ND61 904 aa14.4□□□□□ -0.1
CHMP4C-201ENST00000297265 CCDC26Q8TAB7 109 aa14.4□□□□□ -0.1
CHMP4C-201ENST00000297265 OSBPL7Q9BZF2 842 aa14.4□□□□□ -0.1
CHMP4C-201ENST00000297265 FAM124BQ9H5Z6 455 aaPredicted RBP14.4□□□□□ -0.1
CHMP4C-201ENST00000297265 RNF186Q9NXI6 227 aa14.4□□□□□ -0.1
CHMP4C-201ENST00000297265 PCYOX1Q9UHG3 505 aa14.4□□□□□ -0.1
CHMP4C-201ENST00000297265 GRIN2DO15399 1336 aa14.4□□□□□ -0.1
CHMP4C-201ENST00000297265 F8VP50 259 aa14.4□□□□□ -0.1
CHMP4C-201ENST00000297265 PIRO00625 290 aa14.4□□□□□ -0.1
CHMP4C-201ENST00000297265 PHF2O75151 1096 aa14.4□□□□□ -0.1
CHMP4C-201ENST00000297265 MICAL2O94851 1124 aa14.4□□□□□ -0.1
CHMP4C-201ENST00000297265 ALDH1A1P00352 501 aa14.4□□□□□ -0.1
CHMP4C-201ENST00000297265 PFKMP08237 780 aa14.4□□□□□ -0.1
CHMP4C-201ENST00000297265 P4HA1P13674 534 aa14.4□□□□□ -0.1
CHMP4C-201ENST00000297265 HSPA6P17066 643 aa14.4□□□□□ -0.1
CHMP4C-201ENST00000297265 CCND3P30281 292 aaPredicted RBP14.4□□□□□ -0.1
CHMP4C-201ENST00000297265 MAN1A1P33908 653 aa14.4□□□□□ -0.1
CHMP4C-201ENST00000297265 TNNT3P45378 269 aaPredicted RBP14.4□□□□□ -0.1
CHMP4C-201ENST00000297265 GSCP56915 257 aaPredicted RBP14.4□□□□□ -0.1
CHMP4C-201ENST00000297265 SOX4Q06945 474 aaPredicted RBP14.4□□□□□ -0.1
CHMP4C-201ENST00000297265 ATP13A4Q4VNC1 1196 aa14.4□□□□□ -0.1
CHMP4C-201ENST00000297265 C9orf57Q5W0N0 161 aa14.4□□□□□ -0.1
CHMP4C-201ENST00000297265 TAF2Q6P1X5 1199 aa14.4□□□□□ -0.1
CHMP4C-201ENST00000297265 APBB1IPQ7Z5R6 666 aaPredicted RBP14.4□□□□□ -0.1
CHMP4C-201ENST00000297265 MCEEQ96PE7 176 aa14.4□□□□□ -0.1
CHMP4C-201ENST00000297265 MRPL45Q9BRJ2 306 aaKnown RBP14.4□□□□□ -0.1
CHMP4C-201ENST00000297265 TRIM51Q9BSJ1 452 aa14.4□□□□□ -0.1
CHMP4C-201ENST00000297265 GPBP1L1Q9HC44 474 aaPredicted RBP14.4□□□□□ -0.1
CHMP4C-201ENST00000297265 KLK14Q9P0G3 267 aa14.4□□□□□ -0.1
CHMP4C-201ENST00000297265 IPPQ9Y573 584 aa14.4□□□□□ -0.1
CHMP4C-201ENST00000297265 CASP8AP2Q9UKL3 1982 aa14.39□□□□□ -0.11
CHMP4C-201ENST00000297265 DAPK3O43293 454 aa14.39□□□□□ -0.11
CHMP4C-201ENST00000297265 MED7O43513 233 aa14.39□□□□□ -0.11
CHMP4C-201ENST00000297265 CHRNA1P02708 482 aa14.39□□□□□ -0.11
CHMP4C-201ENST00000297265 ERBB2P04626 1255 aa14.39□□□□□ -0.11
CHMP4C-201ENST00000297265 VDRP11473 427 aa14.39□□□□□ -0.11
CHMP4C-201ENST00000297265 KCNE1P15382 129 aa14.39□□□□□ -0.11
CHMP4C-201ENST00000297265 RFC1P35251 1148 aaPredicted RBP14.39□□□□□ -0.11
CHMP4C-201ENST00000297265 GABRB2P47870 512 aa14.39□□□□□ -0.11
CHMP4C-201ENST00000297265 YARSP54577 528 aaKnown RBP14.39□□□□□ -0.11
CHMP4C-201ENST00000297265 PAK2Q13177 524 aa14.39□□□□□ -0.11
CHMP4C-201ENST00000297265 KLF1Q13351 362 aaPredicted RBP14.39□□□□□ -0.11
CHMP4C-201ENST00000297265 NNTQ13423 1086 aa14.39□□□□□ -0.11
CHMP4C-201ENST00000297265 PPP2R5EQ16537 467 aa14.39□□□□□ -0.11
CHMP4C-201ENST00000297265 DUPD1Q68J44 220 aa14.39□□□□□ -0.11
CHMP4C-201ENST00000297265 PIAS4Q8N2W9 510 aaPredicted RBP14.39□□□□□ -0.11
CHMP4C-201ENST00000297265 ARFGAP1Q8N6T3 406 aa14.39□□□□□ -0.11
CHMP4C-201ENST00000297265 LRRC52Q8N7C0 313 aa14.39□□□□□ -0.11
CHMP4C-201ENST00000297265 C12orf29Q8N999 325 aa14.39□□□□□ -0.11
CHMP4C-201ENST00000297265 KLHDC9Q8NEP7 349 aa14.39□□□□□ -0.11
CHMP4C-201ENST00000297265 HEXIM2Q96MH2 286 aaKnown RBP14.39□□□□□ -0.11
CHMP4C-201ENST00000297265 APOL6Q9BWW8 343 aa14.39□□□□□ -0.11
CHMP4C-201ENST00000297265 TRIM6Q9C030 488 aaPredicted RBP14.39□□□□□ -0.11
CHMP4C-201ENST00000297265 SLTMQ9NWH9 1034 aaKnown RBP eCLIP14.39□□□□□ -0.11
CHMP4C-201ENST00000297265 IP6K2Q9UHH9 426 aa14.39□□□□□ -0.11
CHMP4C-201ENST00000297265 SIGLEC16A6NMB1 481 aa14.38□□□□□ -0.11
CHMP4C-201ENST00000297265 SPTLC1O15269 473 aa14.38□□□□□ -0.11
CHMP4C-201ENST00000297265 PSTPIP1O43586 416 aa14.38□□□□□ -0.11
CHMP4C-201ENST00000297265 HMGCRP04035 888 aa14.38□□□□□ -0.11
CHMP4C-201ENST00000297265 CHRNA3P32297 505 aa14.38□□□□□ -0.11
CHMP4C-201ENST00000297265 FLT3P36888 993 aa14.38□□□□□ -0.11
CHMP4C-201ENST00000297265 MRPS6P82932 125 aaKnown RBP14.38□□□□□ -0.11
CHMP4C-201ENST00000297265 DR1Q01658 176 aa14.38□□□□□ -0.11
CHMP4C-201ENST00000297265 MYO1EQ12965 1108 aa14.38□□□□□ -0.11
CHMP4C-201ENST00000297265 CUL1Q13616 776 aa14.38□□□□□ -0.11
CHMP4C-201ENST00000297265 SOWAHAQ2M3V2 549 aa14.38□□□□□ -0.11
CHMP4C-201ENST00000297265 TXNRD3NBQ6F5E7 133 aa14.38□□□□□ -0.11
CHMP4C-201ENST00000297265 SERINC5Q86VE9 423 aa14.38□□□□□ -0.11
CHMP4C-201ENST00000297265 XYLT1Q86Y38 959 aa14.38□□□□□ -0.11
CHMP4C-201ENST00000297265 RHOT1Q8IXI2 618 aa14.38□□□□□ -0.11
CHMP4C-201ENST00000297265 C12orf50Q8NA57 414 aaPredicted RBP14.38□□□□□ -0.11
CHMP4C-201ENST00000297265 BEST2Q8NFU1 509 aa14.38□□□□□ -0.11
CHMP4C-201ENST00000297265 JOSD2Q8TAC2 188 aa14.38□□□□□ -0.11
CHMP4C-201ENST00000297265 GADD45GIP1Q8TAE8 222 aaPredicted RBP14.38□□□□□ -0.11
CHMP4C-201ENST00000297265 PIK3R5Q8WYR1 880 aa14.38□□□□□ -0.11
CHMP4C-201ENST00000297265 LRRC19Q9H756 370 aa14.38□□□□□ -0.11
CHMP4C-201ENST00000297265 SNX9Q9Y5X1 595 aa14.38□□□□□ -0.11
CHMP4C-201ENST00000297265 CDY2AQ9Y6F7 541 aa14.38□□□□□ -0.11
CHMP4C-201ENST00000297265 GOLGA6L10A0A0M3HER8 536 aa14.38□□□□□ -0.11
CHMP4C-201ENST00000297265 MEIS3P2A8K0S8 358 aa14.38□□□□□ -0.11
CHMP4C-201ENST00000297265 ELNP15502 786 aa14.38□□□□□ -0.11
CHMP4C-201ENST00000297265 MGAT3Q09327 533 aa14.38□□□□□ -0.11
CHMP4C-201ENST00000297265 NOGQ13253 232 aa14.38□□□□□ -0.11
CHMP4C-201ENST00000297265 PKDCCQ504Y2 493 aa14.38□□□□□ -0.11
CHMP4C-201ENST00000297265 DNAJC24Q6P3W2 148 aa14.38□□□□□ -0.11
CHMP4C-201ENST00000297265 LCLAT1Q6UWP7 414 aa14.38□□□□□ -0.11
CHMP4C-201ENST00000297265 PAXIP1Q6ZW49 1069 aaPredicted RBP14.38□□□□□ -0.11
CHMP4C-201ENST00000297265 LIMS2Q7Z4I7 341 aa14.38□□□□□ -0.11
CHMP4C-201ENST00000297265 JAMLQ86YT9 394 aa14.38□□□□□ -0.11
CHMP4C-201ENST00000297265 KATNAL2Q8IYT4 538 aa14.38□□□□□ -0.11
CHMP4C-201ENST00000297265 IQCKQ8N0W5 287 aa14.38□□□□□ -0.11
CHMP4C-201ENST00000297265 MREGQ8N565 214 aa14.38□□□□□ -0.11
CHMP4C-201ENST00000297265 NIPA2Q8N8Q9 360 aa14.38□□□□□ -0.11
Retrieved 100 of 20,778 RNA–protein pairs in 31 ms