RNA–Protein interactions for RNA: ENST00000296861.2

TNFRSF21-201, Transcript of TNF receptor superfamily member 21, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TNFRSF21, Length 3,595 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF21-201ENST00000296861 GPATCH2LQ9NWQ4 482 aa14□□□□□ -0.17
TNFRSF21-201ENST00000296861 CPSF2Q9P2I0 782 aaKnown RBP14□□□□□ -0.17
TNFRSF21-201ENST00000296861 CENPFP49454 3210 aa14□□□□□ -0.17
TNFRSF21-201ENST00000296861 FAM155BO75949 473 aa14□□□□□ -0.17
TNFRSF21-201ENST00000296861 LUC7L3O95232 432 aaKnown RBP14□□□□□ -0.17
TNFRSF21-201ENST00000296861 PHBP35232 272 aa14□□□□□ -0.17
TNFRSF21-201ENST00000296861 CDH8P55286 799 aa14□□□□□ -0.17
TNFRSF21-201ENST00000296861 KPNB1Q14974 876 aaKnown RBP14□□□□□ -0.17
TNFRSF21-201ENST00000296861 SIX1Q15475 284 aaPredicted RBP14□□□□□ -0.17
TNFRSF21-201ENST00000296861 TLDC1Q6P9B6 456 aa14□□□□□ -0.17
TNFRSF21-201ENST00000296861 C15orf52Q6ZUT6 534 aaKnown RBP14□□□□□ -0.17
TNFRSF21-201ENST00000296861 OTOAQ7RTW8 1153 aa14□□□□□ -0.17
TNFRSF21-201ENST00000296861 DEFB132Q7Z7B7 95 aa14□□□□□ -0.17
TNFRSF21-201ENST00000296861 LRRC71Q8N4P6 559 aa14□□□□□ -0.17
TNFRSF21-201ENST00000296861 SLC7A3Q8WY07 619 aa14□□□□□ -0.17
TNFRSF21-201ENST00000296861 ATP6V0A1Q93050 837 aa14□□□□□ -0.17
TNFRSF21-201ENST00000296861 PAFAH2Q99487 392 aa14□□□□□ -0.17
TNFRSF21-201ENST00000296861 SENP7Q9BQF6 1050 aa14□□□□□ -0.17
TNFRSF21-201ENST00000296861 TSSK1BQ9BXA7 367 aa14□□□□□ -0.17
TNFRSF21-201ENST00000296861 PACSIN3Q9UKS6 424 aa14□□□□□ -0.17
TNFRSF21-201ENST00000296861 I3L4J1 428 aa13.99□□□□□ -0.17
TNFRSF21-201ENST00000296861 RFC5P40937 340 aa13.99□□□□□ -0.17
TNFRSF21-201ENST00000296861 PSMC1P62191 440 aaKnown RBP13.99□□□□□ -0.17
TNFRSF21-201ENST00000296861 IRX1P78414 480 aaPredicted RBP13.99□□□□□ -0.17
TNFRSF21-201ENST00000296861 MAMLD1Q13495 774 aa13.99□□□□□ -0.17
TNFRSF21-201ENST00000296861 PTK6Q13882 451 aa13.99□□□□□ -0.17
TNFRSF21-201ENST00000296861 ANKRD22Q5VYY1 191 aa13.99□□□□□ -0.17
TNFRSF21-201ENST00000296861 MCF2L2Q86YR7 1114 aa13.99□□□□□ -0.17
TNFRSF21-201ENST00000296861 ARID3BQ8IVW6 561 aaPredicted RBP13.99□□□□□ -0.17
TNFRSF21-201ENST00000296861 PSPC1Q8WXF1 523 aaKnown RBP13.99□□□□□ -0.17
TNFRSF21-201ENST00000296861 FAF2Q96CS3 445 aa13.99□□□□□ -0.17
TNFRSF21-201ENST00000296861 THTPAQ9BU02 230 aa13.99□□□□□ -0.17
TNFRSF21-201ENST00000296861 TJP2Q9UDY2 1190 aa13.99□□□□□ -0.17
TNFRSF21-201ENST00000296861 XPO7Q9UIA9 1087 aaKnown RBP13.99□□□□□ -0.17
TNFRSF21-201ENST00000296861 RGL2O15211 777 aa13.99□□□□□ -0.17
TNFRSF21-201ENST00000296861 NR3C2P08235 984 aa13.99□□□□□ -0.17
TNFRSF21-201ENST00000296861 FDX1P10109 184 aa13.99□□□□□ -0.17
TNFRSF21-201ENST00000296861 MORC4Q8TE76 937 aa13.99□□□□□ -0.17
TNFRSF21-201ENST00000296861 DDX27Q96GQ7 796 aaKnown RBP13.99□□□□□ -0.17
TNFRSF21-201ENST00000296861 ZNF395Q9H8N7 513 aaPredicted RBP13.99□□□□□ -0.17
TNFRSF21-201ENST00000296861 LOC100653049A0A140TA62 436 aa13.99□□□□□ -0.17
TNFRSF21-201ENST00000296861 CCDC78A2IDD5 438 aa13.99□□□□□ -0.17
TNFRSF21-201ENST00000296861 B2RBV5 119 aa13.99□□□□□ -0.17
TNFRSF21-201ENST00000296861 KRT34O76011 436 aa13.99□□□□□ -0.17
TNFRSF21-201ENST00000296861 APRTP07741 180 aa13.99□□□□□ -0.17
TNFRSF21-201ENST00000296861 RBP3P10745 1247 aa13.99□□□□□ -0.17
TNFRSF21-201ENST00000296861 PYGBP11216 843 aa13.99□□□□□ -0.17
TNFRSF21-201ENST00000296861 PTDSS1P48651 473 aaKnown RBP13.99□□□□□ -0.17
TNFRSF21-201ENST00000296861 RGS7P49802 495 aa13.99□□□□□ -0.17
TNFRSF21-201ENST00000296861 ARL4CP56559 192 aa13.99□□□□□ -0.17
TNFRSF21-201ENST00000296861 WNT7BP56706 349 aa13.99□□□□□ -0.17
TNFRSF21-201ENST00000296861 CUL2Q13617 745 aa13.99□□□□□ -0.17
TNFRSF21-201ENST00000296861 ZRSR2Q15696 482 aaKnown RBP13.99□□□□□ -0.17
TNFRSF21-201ENST00000296861 C6orf163Q5TEZ5 329 aa13.99□□□□□ -0.17
TNFRSF21-201ENST00000296861 TDRD10Q5VZ19 366 aaKnown RBP13.99□□□□□ -0.17
TNFRSF21-201ENST00000296861 TATDN1Q6P1N9 297 aa13.99□□□□□ -0.17
TNFRSF21-201ENST00000296861 NPNTQ6UXI9 565 aa13.99□□□□□ -0.17
TNFRSF21-201ENST00000296861 DSTYKQ6XUX3 929 aa13.99□□□□□ -0.17
TNFRSF21-201ENST00000296861 ZNF606Q8WXB4 792 aa13.99□□□□□ -0.17
TNFRSF21-201ENST00000296861 CRYGNQ8WXF5 182 aa13.99□□□□□ -0.17
TNFRSF21-201ENST00000296861 EBF2Q9HAK2 575 aa13.99□□□□□ -0.17
TNFRSF21-201ENST00000296861 TBC1D22BQ9NU19 505 aa13.99□□□□□ -0.17
TNFRSF21-201ENST00000296861 PARVAQ9NVD7 372 aa13.99□□□□□ -0.17
TNFRSF21-201ENST00000296861 PSMC3IPQ9P2W1 217 aaPredicted RBP13.99□□□□□ -0.17
TNFRSF21-201ENST00000296861 NUB1Q9Y5A7 615 aa13.99□□□□□ -0.17
TNFRSF21-201ENST00000296861 ADGRA3Q8IWK6 1321 aa13.98□□□□□ -0.17
TNFRSF21-201ENST00000296861 PIK3CDO00329 1044 aa13.98□□□□□ -0.17
TNFRSF21-201ENST00000296861 ONECUT3O60422 494 aaPredicted RBP13.98□□□□□ -0.17
TNFRSF21-201ENST00000296861 OPHN1O60890 802 aa13.98□□□□□ -0.17
TNFRSF21-201ENST00000296861 MYL2P10916 166 aa13.98□□□□□ -0.17
TNFRSF21-201ENST00000296861 MYL6P60660 151 aa13.98□□□□□ -0.17
TNFRSF21-201ENST00000296861 CCNG2Q16589 344 aa13.98□□□□□ -0.17
TNFRSF21-201ENST00000296861 TRABD2AQ86V40 505 aa13.98□□□□□ -0.17
TNFRSF21-201ENST00000296861 PRR11Q96HE9 360 aaPredicted RBP13.98□□□□□ -0.17
TNFRSF21-201ENST00000296861 CLPTM1LQ96KA5 538 aa13.98□□□□□ -0.17
TNFRSF21-201ENST00000296861 ACAP3Q96P50 834 aa13.98□□□□□ -0.17
TNFRSF21-201ENST00000296861 SYT11Q9BT88 431 aa13.98□□□□□ -0.17
TNFRSF21-201ENST00000296861 DENND2DQ9H6A0 471 aaPredicted RBP13.98□□□□□ -0.17
TNFRSF21-201ENST00000296861 RPAP3Q9H6T3 665 aaPredicted RBP13.98□□□□□ -0.17
TNFRSF21-201ENST00000296861 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP13.98□□□□□ -0.17
TNFRSF21-201ENST00000296861 MEI4A8MW99 385 aa13.98□□□□□ -0.17
TNFRSF21-201ENST00000296861 ASNSP08243 561 aa13.98□□□□□ -0.17
TNFRSF21-201ENST00000296861 PGM1P36871 562 aa13.98□□□□□ -0.17
TNFRSF21-201ENST00000296861 NOVP48745 357 aa13.98□□□□□ -0.17
TNFRSF21-201ENST00000296861 EIF3EP60228 445 aaKnown RBP13.98□□□□□ -0.17
TNFRSF21-201ENST00000296861 CAV1Q03135 178 aa13.98□□□□□ -0.17
TNFRSF21-201ENST00000296861 PTK7Q13308 1070 aa13.98□□□□□ -0.17
TNFRSF21-201ENST00000296861 RIPK1Q13546 671 aa13.98□□□□□ -0.17
TNFRSF21-201ENST00000296861 KRT81Q14533 505 aa13.98□□□□□ -0.17
TNFRSF21-201ENST00000296861 MAPK6Q16659 721 aa13.98□□□□□ -0.17
TNFRSF21-201ENST00000296861 WDR72Q3MJ13 1102 aa13.98□□□□□ -0.17
TNFRSF21-201ENST00000296861 MROH9Q5TGP6 573 aa13.98□□□□□ -0.17
TNFRSF21-201ENST00000296861 CGB2Q6NT52 195 aa13.98□□□□□ -0.17
TNFRSF21-201ENST00000296861 FAM160B2Q86V87 743 aa13.98□□□□□ -0.17
TNFRSF21-201ENST00000296861 UBA3Q8TBC4 463 aa13.98□□□□□ -0.17
TNFRSF21-201ENST00000296861 AKT1S1Q96B36 256 aa13.98□□□□□ -0.17
TNFRSF21-201ENST00000296861 MANSC1Q9H8J5 431 aa13.98□□□□□ -0.17
TNFRSF21-201ENST00000296861 RAB6BQ9NRW1 208 aa13.98□□□□□ -0.17
TNFRSF21-201ENST00000296861 FAM237BA0A1B0GVD1 139 aa13.98□□□□□ -0.17
TNFRSF21-201ENST00000296861 COPEO14579 308 aa13.98□□□□□ -0.17
Retrieved 100 of 20,778 RNA–protein pairs in 37.5 ms