RNA–Protein interactions for RNA: ENST00000296271.3

RHO-201, Transcript of rhodopsin, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RHO, Length 2,592 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RHO-201ENST00000296271 FAM81BQ96LP2 452 aa12.46□□□□□ -0.42
RHO-201ENST00000296271 ELOVL4Q9GZR5 314 aa12.46□□□□□ -0.42
RHO-201ENST00000296271 SMARCAD1Q9H4L7 1026 aa12.46□□□□□ -0.42
RHO-201ENST00000296271 PCSK1NQ9UHG2 260 aa12.46□□□□□ -0.42
RHO-201ENST00000296271 ANAPC5Q9UJX4 755 aa12.46□□□□□ -0.42
RHO-201ENST00000296271 RASGRF2O14827 1237 aa12.45□□□□□ -0.42
RHO-201ENST00000296271 FAM107AO95990 144 aa12.45□□□□□ -0.42
RHO-201ENST00000296271 ARF4P18085 180 aaPredicted RBP12.45□□□□□ -0.42
RHO-201ENST00000296271 EPHX2P34913 555 aa12.45□□□□□ -0.42
RHO-201ENST00000296271 RAD23BP54727 409 aa12.45□□□□□ -0.42
RHO-201ENST00000296271 PPP1R15BQ5SWA1 713 aa12.45□□□□□ -0.42
RHO-201ENST00000296271 IZUMO3Q5VZ72 239 aa12.45□□□□□ -0.42
RHO-201ENST00000296271 MAP1SQ66K74 1059 aaPredicted RBP12.45□□□□□ -0.42
RHO-201ENST00000296271 CYP4F22Q6NT55 531 aa12.45□□□□□ -0.42
RHO-201ENST00000296271 TRIM72Q6ZMU5 477 aa12.45□□□□□ -0.42
RHO-201ENST00000296271 LRRN4Q8WUT4 740 aa12.45□□□□□ -0.42
RHO-201ENST00000296271 MRRFQ96E11 262 aaKnown RBP12.45□□□□□ -0.42
RHO-201ENST00000296271 TMEM121Q9BTD3 319 aa12.45□□□□□ -0.42
RHO-201ENST00000296271 RPF1Q9H9Y2 349 aaKnown RBP12.45□□□□□ -0.42
RHO-201ENST00000296271 DDX20Q9UHI6 824 aaKnown RBP12.45□□□□□ -0.42
RHO-201ENST00000296271 GOLGA8MH3BSY2 632 aa12.45□□□□□ -0.42
RHO-201ENST00000296271 PSTPIP1O43586 416 aa12.45□□□□□ -0.42
RHO-201ENST00000296271 HCRTO43612 131 aa12.45□□□□□ -0.42
RHO-201ENST00000296271 ATP2C2O75185 946 aa12.45□□□□□ -0.42
RHO-201ENST00000296271 GRAP2O75791 330 aa12.45□□□□□ -0.42
RHO-201ENST00000296271 ERBB2P04626 1255 aa12.45□□□□□ -0.42
RHO-201ENST00000296271 ABCD1P33897 745 aa12.45□□□□□ -0.42
RHO-201ENST00000296271 EIF3BP55884 814 aaKnown RBP12.45□□□□□ -0.42
RHO-201ENST00000296271 TTLL4Q14679 1199 aa12.45□□□□□ -0.42
RHO-201ENST00000296271 SLC10A6Q3KNW5 377 aa12.45□□□□□ -0.42
RHO-201ENST00000296271 SYCP2LQ5T4T6 812 aa12.45□□□□□ -0.42
RHO-201ENST00000296271 EXOC3L1Q86VI1 746 aa12.45□□□□□ -0.42
RHO-201ENST00000296271 PACS2Q86VP3 889 aa12.45□□□□□ -0.42
RHO-201ENST00000296271 CCDC125Q86Z20 511 aa12.45□□□□□ -0.42
RHO-201ENST00000296271 C12orf29Q8N999 325 aa12.45□□□□□ -0.42
RHO-201ENST00000296271 TMEM35BQ8NCS4 154 aa12.45□□□□□ -0.42
RHO-201ENST00000296271 EXD1Q8NHP7 514 aa12.45□□□□□ -0.42
RHO-201ENST00000296271 CXorf38Q8TB03 319 aa12.45□□□□□ -0.42
RHO-201ENST00000296271 SLCO2A1Q92959 643 aa12.45□□□□□ -0.42
RHO-201ENST00000296271 LENG1Q96BZ8 264 aaPredicted RBP12.45□□□□□ -0.42
RHO-201ENST00000296271 PRMT1Q99873 361 aaKnown RBP12.45□□□□□ -0.42
RHO-201ENST00000296271 PLVAPQ9BX97 442 aa12.45□□□□□ -0.42
RHO-201ENST00000296271 NINJ2Q9NZG7 142 aa12.45□□□□□ -0.42
RHO-201ENST00000296271 WHRNQ9P202 907 aa12.45□□□□□ -0.42
RHO-201ENST00000296271 SCINQ9Y6U3 715 aa12.45□□□□□ -0.42
RHO-201ENST00000296271 PPEF2O14830 753 aa12.44□□□□□ -0.42
RHO-201ENST00000296271 HBP1O60381 514 aa12.44□□□□□ -0.42
RHO-201ENST00000296271 TNNC2P02585 160 aa12.44□□□□□ -0.42
RHO-201ENST00000296271 CYP3A5P20815 502 aa12.44□□□□□ -0.42
RHO-201ENST00000296271 KLRC2P26717 231 aa12.44□□□□□ -0.42
RHO-201ENST00000296271 POLR2BP30876 1174 aaKnown RBP12.44□□□□□ -0.42
RHO-201ENST00000296271 GDF10P55107 478 aa12.44□□□□□ -0.42
RHO-201ENST00000296271 MPP2Q14168 576 aa12.44□□□□□ -0.42
RHO-201ENST00000296271 SPOCD1Q6ZMY3 1216 aa12.44□□□□□ -0.42
RHO-201ENST00000296271 HOOK3Q86VS8 718 aa12.44□□□□□ -0.42
RHO-201ENST00000296271 MICALL1Q8N3F8 863 aa12.44□□□□□ -0.42
RHO-201ENST00000296271 ARFGAP2Q8N6H7 521 aa12.44□□□□□ -0.42
RHO-201ENST00000296271 SLC4A11Q8NBS3 891 aa12.44□□□□□ -0.42
RHO-201ENST00000296271 IPO4Q8TEX9 1081 aaKnown RBP12.44□□□□□ -0.42
RHO-201ENST00000296271 ATXN2LQ8WWM7 1075 aaKnown RBP12.44□□□□□ -0.42
RHO-201ENST00000296271 KAT2BQ92831 832 aa12.44□□□□□ -0.42
RHO-201ENST00000296271 PGM2Q96G03 612 aa12.44□□□□□ -0.42
RHO-201ENST00000296271 ANKRD36BP1Q96IX9 119 aa12.44□□□□□ -0.42
RHO-201ENST00000296271 VCPIP1Q96JH7 1222 aa12.44□□□□□ -0.42
RHO-201ENST00000296271 XPO6Q96QU8 1125 aaKnown RBP12.44□□□□□ -0.42
RHO-201ENST00000296271 RASSF4Q9H2L5 321 aa12.44□□□□□ -0.42
RHO-201ENST00000296271 PDZD7Q9H5P4 517 aa12.44□□□□□ -0.42
RHO-201ENST00000296271 METTL5Q9NRN9 209 aaKnown RBP12.44□□□□□ -0.42
RHO-201ENST00000296271 PARP2Q9UGN5 583 aa12.44□□□□□ -0.42
RHO-201ENST00000296271 IP6K2Q9UHH9 426 aa12.44□□□□□ -0.42
RHO-201ENST00000296271 ZNF148Q9UQR1 794 aa12.44□□□□□ -0.42
RHO-201ENST00000296271 HES2Q9Y543 173 aa12.44□□□□□ -0.42
RHO-201ENST00000296271 DYNC1LI1Q9Y6G9 523 aaKnown RBP12.44□□□□□ -0.42
RHO-201ENST00000296271 LIASO43766 372 aa12.44□□□□□ -0.42
RHO-201ENST00000296271 GH1P01241 217 aa12.44□□□□□ -0.42
RHO-201ENST00000296271 IFNB1P01574 187 aa12.44□□□□□ -0.42
RHO-201ENST00000296271 MMP13P45452 471 aa12.44□□□□□ -0.42
RHO-201ENST00000296271 CCNG2Q16589 344 aa12.44□□□□□ -0.42
RHO-201ENST00000296271 RNF187Q5TA31 235 aaPredicted RBP12.44□□□□□ -0.42
RHO-201ENST00000296271 ZNF365Q70YC5 407 aa12.44□□□□□ -0.42
RHO-201ENST00000296271 SYT17Q9BSW7 474 aa12.44□□□□□ -0.42
RHO-201ENST00000296271 CDHR5Q9HBB8 845 aa12.44□□□□□ -0.42
RHO-201ENST00000296271 ERAP1Q9NZ08 941 aa12.44□□□□□ -0.42
RHO-201ENST00000296271 B4GALT4O60513 344 aa12.43□□□□□ -0.42
RHO-201ENST00000296271 LRCH4O75427 683 aa12.43□□□□□ -0.42
RHO-201ENST00000296271 GAS8O95995 478 aa12.43□□□□□ -0.42
RHO-201ENST00000296271 ITIH2P19823 946 aa12.43□□□□□ -0.42
RHO-201ENST00000296271 OSBPP22059 807 aa12.43□□□□□ -0.42
RHO-201ENST00000296271 PSMA2P25787 234 aa12.43□□□□□ -0.42
RHO-201ENST00000296271 PSMC1P62191 440 aaKnown RBP12.43□□□□□ -0.42
RHO-201ENST00000296271 PLCB3Q01970 1234 aa12.43□□□□□ -0.42
RHO-201ENST00000296271 SLMAPQ14BN4 828 aa12.43□□□□□ -0.42
RHO-201ENST00000296271 ZNF667Q5HYK9 610 aa12.43□□□□□ -0.42
RHO-201ENST00000296271 PRAMEF19Q5SWL8 479 aa12.43□□□□□ -0.42
RHO-201ENST00000296271 ILDR2Q71H61 639 aa12.43□□□□□ -0.42
RHO-201ENST00000296271 TNFSF13BQ9Y275 285 aa12.43□□□□□ -0.42
RHO-201ENST00000296271 SCN1AP35498 2009 aa12.43□□□□□ -0.42
RHO-201ENST00000296271 DRD4P21917 467 aa12.43□□□□□ -0.42
RHO-201ENST00000296271 ARSEP51690 589 aa12.43□□□□□ -0.42
RHO-201ENST00000296271 KIZQ2M2Z5 673 aa12.43□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 44.7 ms