RNA–Protein interactions for RNA: ENST00000296026.4

CXCL3-201, Transcript of C-X-C motif chemokine ligand 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CXCL3, Length 1,075 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CXCL3-201ENST00000296026 HAPLN1P10915 354 aaPredicted RBP21.15■□□□□ 0.98
CXCL3-201ENST00000296026 IDEP14735 1019 aa21.15■□□□□ 0.98
CXCL3-201ENST00000296026 CDC25CP30307 473 aa21.15■□□□□ 0.98
CXCL3-201ENST00000296026 CCR3P51677 355 aa21.15■□□□□ 0.98
CXCL3-201ENST00000296026 NRLP54845 237 aa21.15■□□□□ 0.98
CXCL3-201ENST00000296026 TFAMQ00059 246 aaKnown RBP21.15■□□□□ 0.98
CXCL3-201ENST00000296026 SMARCB1Q12824 385 aa21.15■□□□□ 0.98
CXCL3-201ENST00000296026 ARHGAP29Q52LW3 1261 aa21.15■□□□□ 0.98
CXCL3-201ENST00000296026 C1orf228Q6PIY5 440 aa21.15■□□□□ 0.98
CXCL3-201ENST00000296026 CCDC73Q6ZRK6 1079 aa21.15■□□□□ 0.98
CXCL3-201ENST00000296026 DCP1BQ8IZD4 617 aaKnown RBP21.15■□□□□ 0.98
CXCL3-201ENST00000296026 TTC8Q8TAM2 541 aa21.15■□□□□ 0.98
CXCL3-201ENST00000296026 GCNAQ96QF7 691 aa21.15■□□□□ 0.98
CXCL3-201ENST00000296026 PANK2Q9BZ23 570 aa21.15■□□□□ 0.98
CXCL3-201ENST00000296026 OLFML3Q9NRN5 406 aa21.15■□□□□ 0.98
CXCL3-201ENST00000296026 ABI2Q9NYB9 513 aaPredicted RBP21.15■□□□□ 0.98
CXCL3-201ENST00000296026 PCDHB13Q9Y5F0 798 aa21.15■□□□□ 0.98
CXCL3-201ENST00000296026 WDR87Q6ZQQ6 2873 aa21.14■□□□□ 0.97
CXCL3-201ENST00000296026 SPECC1L-ADORA2AF8WAN1 911 aa21.14■□□□□ 0.97
CXCL3-201ENST00000296026 LDHAP00338 332 aaKnown RBP21.14■□□□□ 0.97
CXCL3-201ENST00000296026 WEE1P30291 646 aa21.14■□□□□ 0.97
CXCL3-201ENST00000296026 POLR2BP30876 1174 aaKnown RBP21.14■□□□□ 0.97
CXCL3-201ENST00000296026 PNPLA4P41247 253 aa21.14■□□□□ 0.97
CXCL3-201ENST00000296026 STAT6P42226 847 aa21.14■□□□□ 0.97
CXCL3-201ENST00000296026 CASP5P51878 434 aa21.14■□□□□ 0.97
CXCL3-201ENST00000296026 LRRC32Q14392 662 aa21.14■□□□□ 0.97
CXCL3-201ENST00000296026 BRSK2Q8IWQ3 736 aa21.14■□□□□ 0.97
CXCL3-201ENST00000296026 SYCP3Q8IZU3 236 aa21.14■□□□□ 0.97
CXCL3-201ENST00000296026 BPIFB1Q8TDL5 484 aa21.14■□□□□ 0.97
CXCL3-201ENST00000296026 SECISBP2LQ93073 1101 aaKnown RBP21.14■□□□□ 0.97
CXCL3-201ENST00000296026 RBM12Q9NTZ6 932 aaKnown RBP21.14■□□□□ 0.97
CXCL3-201ENST00000296026 GTSE1Q9NYZ3 720 aa21.14■□□□□ 0.97
CXCL3-201ENST00000296026 AGAP1Q9UPQ3 857 aa21.14■□□□□ 0.97
CXCL3-201ENST00000296026 A0A087X0B3 334 aa21.13■□□□□ 0.97
CXCL3-201ENST00000296026 MYBPHLA2RUH7 354 aa21.13■□□□□ 0.97
CXCL3-201ENST00000296026 ITGB3P05106 788 aa21.13■□□□□ 0.97
CXCL3-201ENST00000296026 GARTP22102 1010 aa21.13■□□□□ 0.97
CXCL3-201ENST00000296026 CTHP32929 405 aa21.13■□□□□ 0.97
CXCL3-201ENST00000296026 CXCL12P48061 93 aa21.13■□□□□ 0.97
CXCL3-201ENST00000296026 SATB1Q01826 763 aa21.13■□□□□ 0.97
CXCL3-201ENST00000296026 GAS6Q14393 721 aa21.13■□□□□ 0.97
CXCL3-201ENST00000296026 PUM1Q14671 1186 aaKnown RBP eCLIP21.13■□□□□ 0.97
CXCL3-201ENST00000296026 SLC39A14Q15043 492 aa21.13■□□□□ 0.97
CXCL3-201ENST00000296026 TXNDC11Q6PKC3 985 aa21.13■□□□□ 0.97
CXCL3-201ENST00000296026 DGLUCYQ7Z3D6 616 aa21.13■□□□□ 0.97
CXCL3-201ENST00000296026 RALGPS2Q86X27 583 aaPredicted RBP21.13■□□□□ 0.97
CXCL3-201ENST00000296026 C1orf127Q8N9H9 656 aa21.13■□□□□ 0.97
CXCL3-201ENST00000296026 USP28Q96RU2 1077 aa21.13■□□□□ 0.97
CXCL3-201ENST00000296026 SLC46A2Q9BY10 475 aa21.13■□□□□ 0.97
CXCL3-201ENST00000296026 FGFBP2Q9BYJ0 223 aa21.13■□□□□ 0.97
CXCL3-201ENST00000296026 TMLHEQ9NVH6 421 aa21.13■□□□□ 0.97
CXCL3-201ENST00000296026 RBAKQ9NYW8 714 aaPredicted RBP21.13■□□□□ 0.97
CXCL3-201ENST00000296026 PCDHB5Q9Y5E4 795 aa21.13■□□□□ 0.97
CXCL3-201ENST00000296026 FRMD3A2A2Y4 597 aa21.12■□□□□ 0.97
CXCL3-201ENST00000296026 GOLGA8IPA6NC78 632 aa21.12■□□□□ 0.97
CXCL3-201ENST00000296026 GOLGA8JA6NMD2 632 aa21.12■□□□□ 0.97
CXCL3-201ENST00000296026 TSPY1Q01534 308 aa21.12■□□□□ 0.97
CXCL3-201ENST00000296026 ALCAMQ13740 583 aa21.12■□□□□ 0.97
CXCL3-201ENST00000296026 WDR44Q5JSH3 913 aa21.12■□□□□ 0.97
CXCL3-201ENST00000296026 PDCL2Q8N4E4 241 aa21.12■□□□□ 0.97
CXCL3-201ENST00000296026 SPEM1Q8N4L4 309 aa21.12■□□□□ 0.97
CXCL3-201ENST00000296026 GPR161Q8N6U8 529 aaKnown RBP21.12■□□□□ 0.97
CXCL3-201ENST00000296026 NOC3LQ8WTT2 800 aaKnown RBP21.12■□□□□ 0.97
CXCL3-201ENST00000296026 CACTINQ8WUQ7 758 aaKnown RBP21.12■□□□□ 0.97
CXCL3-201ENST00000296026 SMG9Q9H0W8 520 aaKnown RBP21.12■□□□□ 0.97
CXCL3-201ENST00000296026 PANK4Q9NVE7 773 aa21.12■□□□□ 0.97
CXCL3-201ENST00000296026 MTMR6Q9Y217 621 aa21.12■□□□□ 0.97
CXCL3-201ENST00000296026 MORC2Q9Y6X9 1032 aaPredicted RBP21.12■□□□□ 0.97
CXCL3-201ENST00000296026 DCHS1Q96JQ0 3298 aa21.11■□□□□ 0.97
CXCL3-201ENST00000296026 PLCB2Q00722 1185 aa21.11■□□□□ 0.97
CXCL3-201ENST00000296026 TNK2Q07912 1038 aa21.11■□□□□ 0.97
CXCL3-201ENST00000296026 DGKKQ5KSL6 1271 aa21.11■□□□□ 0.97
CXCL3-201ENST00000296026 SCARA3Q6AZY7 606 aa21.11■□□□□ 0.97
CXCL3-201ENST00000296026 CMTM8Q8IZV2 173 aa21.11■□□□□ 0.97
CXCL3-201ENST00000296026 CELF5Q8N6W0 485 aaKnown RBP21.11■□□□□ 0.97
CXCL3-201ENST00000296026 PDILTQ8N807 584 aa21.11■□□□□ 0.97
CXCL3-201ENST00000296026 INTS4Q96HW7 963 aaKnown RBP21.11■□□□□ 0.97
CXCL3-201ENST00000296026 FAM84AQ96KN4 292 aa21.11■□□□□ 0.97
CXCL3-201ENST00000296026 CBWD1Q9BRT8 395 aa21.11■□□□□ 0.97
CXCL3-201ENST00000296026 PI4K2AQ9BTU6 479 aa21.11■□□□□ 0.97
CXCL3-201ENST00000296026 PCIF1Q9H4Z3 704 aa21.11■□□□□ 0.97
CXCL3-201ENST00000296026 FOXD4L1Q9NU39 408 aa21.11■□□□□ 0.97
CXCL3-201ENST00000296026 THG1LQ9NWX6 298 aaKnown RBP21.11■□□□□ 0.97
CXCL3-201ENST00000296026 DLL3Q9NYJ7 618 aa21.11■□□□□ 0.97
CXCL3-201ENST00000296026 ZMYM5Q9UJ78 669 aa21.11■□□□□ 0.97
CXCL3-201ENST00000296026 L1RE1Q9UN81 338 aa21.11■□□□□ 0.97
CXCL3-201ENST00000296026 EXTL3O43909 919 aa21.1■□□□□ 0.97
CXCL3-201ENST00000296026 HUS1O60921 280 aa21.1■□□□□ 0.97
CXCL3-201ENST00000296026 PRPF40AO75400 957 aaKnown RBP21.1■□□□□ 0.97
CXCL3-201ENST00000296026 PRPF6O94906 941 aaKnown RBP21.1■□□□□ 0.97
CXCL3-201ENST00000296026 F11P03951 625 aa21.1■□□□□ 0.97
CXCL3-201ENST00000296026 HMGA1P17096 107 aaKnown RBP21.1■□□□□ 0.97
CXCL3-201ENST00000296026 GPR15P49685 360 aa21.1■□□□□ 0.97
CXCL3-201ENST00000296026 NLRP12P59046 1061 aa21.1■□□□□ 0.97
CXCL3-201ENST00000296026 BFSP1Q12934 665 aa21.1■□□□□ 0.97
CXCL3-201ENST00000296026 PON2Q15165 354 aa21.1■□□□□ 0.97
CXCL3-201ENST00000296026 NFE2Q16621 373 aaPredicted RBP21.1■□□□□ 0.97
CXCL3-201ENST00000296026 RSPO4Q2I0M5 234 aaPredicted RBP21.1■□□□□ 0.97
CXCL3-201ENST00000296026 Q6ZS52 159 aa21.1■□□□□ 0.97
CXCL3-201ENST00000296026 TMEM150AQ86TG1 271 aa21.1■□□□□ 0.97
Retrieved 100 of 20,778 RNA–protein pairs in 33.6 ms