RNA–Protein interactions for RNA: ENST00000295549.8

LINC01116-201, Transcript of long intergenic non-protein coding RNA 1116, humanhuman

TSL 2 BASIC

Gene LINC01116, Length 1,407 nt, Biotype lincRNA, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01116-201ENST00000295549 NME7Q9Y5B8 376 aa24.13■■□□□ 1.45
LINC01116-201ENST00000295549 PRRC2BQ5JSZ5 2229 aaKnown RBP24.13■■□□□ 1.45
LINC01116-201ENST00000295549 A0A1W2PQC6 194 aa24.12■■□□□ 1.45
LINC01116-201ENST00000295549 A8MXQ7 604 aa24.12■■□□□ 1.45
LINC01116-201ENST00000295549 CILPO75339 1184 aa24.12■■□□□ 1.45
LINC01116-201ENST00000295549 RFX1P22670 979 aa24.12■■□□□ 1.45
LINC01116-201ENST00000295549 TSPY1Q01534 308 aa24.12■■□□□ 1.45
LINC01116-201ENST00000295549 ROR1Q01973 937 aa24.12■■□□□ 1.45
LINC01116-201ENST00000295549 DUSP6Q16828 381 aa24.12■■□□□ 1.45
LINC01116-201ENST00000295549 RBM23Q86U06 439 aaKnown RBP24.12■■□□□ 1.45
LINC01116-201ENST00000295549 UBR7Q8N806 425 aa24.12■■□□□ 1.45
LINC01116-201ENST00000295549 KREMEN1Q96MU8 473 aa24.12■■□□□ 1.45
LINC01116-201ENST00000295549 LSM14BQ9BX40 385 aaKnown RBP24.12■■□□□ 1.45
LINC01116-201ENST00000295549 IFNKQ9P0W0 207 aa24.12■■□□□ 1.45
LINC01116-201ENST00000295549 PER2O15055 1255 aa24.11■■□□□ 1.45
LINC01116-201ENST00000295549 ABLIM3O94929 683 aa24.11■■□□□ 1.45
LINC01116-201ENST00000295549 PDGFRBP09619 1106 aa24.11■■□□□ 1.45
LINC01116-201ENST00000295549 FOSL2P15408 326 aa24.11■■□□□ 1.45
LINC01116-201ENST00000295549 CD58P19256 250 aa24.11■■□□□ 1.45
LINC01116-201ENST00000295549 NRIP1P48552 1158 aa24.11■■□□□ 1.45
LINC01116-201ENST00000295549 CLCN4P51793 760 aa24.11■■□□□ 1.45
LINC01116-201ENST00000295549 MFAP3P55082 362 aa24.11■■□□□ 1.45
LINC01116-201ENST00000295549 GPR17Q13304 367 aa24.11■■□□□ 1.45
LINC01116-201ENST00000295549 INTS6LQ5JSJ4 861 aaKnown RBP24.11■■□□□ 1.45
LINC01116-201ENST00000295549 TPGS2Q68CL5 300 aa24.11■■□□□ 1.45
LINC01116-201ENST00000295549 LILRA6Q6PI73 481 aa24.11■■□□□ 1.45
LINC01116-201ENST00000295549 GLYCTKQ8IVS8 523 aa24.11■■□□□ 1.45
LINC01116-201ENST00000295549 DCP1BQ8IZD4 617 aaKnown RBP24.11■■□□□ 1.45
LINC01116-201ENST00000295549 ZNF461Q8TAF7 563 aa24.11■■□□□ 1.45
LINC01116-201ENST00000295549 WHAMMQ8TF30 809 aa24.11■■□□□ 1.45
LINC01116-201ENST00000295549 KAT5Q92993 513 aa24.11■■□□□ 1.45
LINC01116-201ENST00000295549 DAAM1Q9Y4D1 1078 aa24.11■■□□□ 1.45
LINC01116-201ENST00000295549 HCRTO43612 131 aa24.1■■□□□ 1.45
LINC01116-201ENST00000295549 TPM3P06753 285 aa24.1■■□□□ 1.45
LINC01116-201ENST00000295549 UCHL3P15374 230 aa24.1■■□□□ 1.45
LINC01116-201ENST00000295549 ACO1P21399 889 aaKnown RBP24.1■■□□□ 1.45
LINC01116-201ENST00000295549 ACAT1P24752 427 aaKnown RBP24.1■■□□□ 1.45
LINC01116-201ENST00000295549 KLK7P49862 253 aa24.1■■□□□ 1.45
LINC01116-201ENST00000295549 NDST1P52848 882 aa24.1■■□□□ 1.45
LINC01116-201ENST00000295549 SMARCB1Q12824 385 aa24.1■■□□□ 1.45
LINC01116-201ENST00000295549 FAM171BQ6P995 826 aa24.1■■□□□ 1.45
LINC01116-201ENST00000295549 GJB7Q6PEY0 223 aa24.1■■□□□ 1.45
LINC01116-201ENST00000295549 SARM1Q6SZW1 724 aa24.1■■□□□ 1.45
LINC01116-201ENST00000295549 LRRTM3Q86VH5 581 aa24.1■■□□□ 1.45
LINC01116-201ENST00000295549 CRYBG2Q8N1P7 616 aa24.1■■□□□ 1.45
LINC01116-201ENST00000295549 TNIP3Q96KP6 325 aa24.1■■□□□ 1.45
LINC01116-201ENST00000295549 TMEM209Q96SK2 561 aa24.1■■□□□ 1.45
LINC01116-201ENST00000295549 PKMYT1Q99640 499 aa24.1■■□□□ 1.45
LINC01116-201ENST00000295549 SYT15Q9BQS2 421 aa24.1■■□□□ 1.45
LINC01116-201ENST00000295549 NT5C1AQ9BXI3 368 aa24.1■■□□□ 1.45
LINC01116-201ENST00000295549 MAFFQ9ULX9 164 aa24.1■■□□□ 1.45
LINC01116-201ENST00000295549 TSC2P49815 1807 aa24.1■■□□□ 1.45
LINC01116-201ENST00000295549 WDR27A2RRH5 827 aa24.1■■□□□ 1.45
LINC01116-201ENST00000295549 CBFA2T2O43439 604 aa24.1■■□□□ 1.45
LINC01116-201ENST00000295549 TGM5O43548 720 aa24.1■■□□□ 1.45
LINC01116-201ENST00000295549 NOL4O94818 638 aa24.1■■□□□ 1.45
LINC01116-201ENST00000295549 GLUD1P00367 558 aa24.1■■□□□ 1.45
LINC01116-201ENST00000295549 CPB1P15086 417 aa24.1■■□□□ 1.45
LINC01116-201ENST00000295549 ARPP19P56211 112 aa24.1■■□□□ 1.45
LINC01116-201ENST00000295549 HYAL1Q12794 435 aa24.1■■□□□ 1.45
LINC01116-201ENST00000295549 KCNC3Q14003 757 aa24.1■■□□□ 1.45
LINC01116-201ENST00000295549 UVSSAQ2YD98 709 aa24.1■■□□□ 1.45
LINC01116-201ENST00000295549 PALB2Q86YC2 1186 aa24.1■■□□□ 1.45
LINC01116-201ENST00000295549 SLC22A17Q8WUG5 538 aa24.1■■□□□ 1.45
LINC01116-201ENST00000295549 NAA15Q9BXJ9 866 aaKnown RBP24.1■■□□□ 1.45
LINC01116-201ENST00000295549 FAM207AQ9NSI2 230 aaPredicted RBP24.1■■□□□ 1.45
LINC01116-201ENST00000295549 DNAJC12Q9UKB3 198 aa24.1■■□□□ 1.45
LINC01116-201ENST00000295549 NCK2O43639 380 aa24.09■■□□□ 1.45
LINC01116-201ENST00000295549 OR4Q2P0C623 313 aa24.09■■□□□ 1.45
LINC01116-201ENST00000295549 PTPN1P18031 435 aaKnown RBP24.09■■□□□ 1.45
LINC01116-201ENST00000295549 PBX1P40424 430 aa24.09■■□□□ 1.45
LINC01116-201ENST00000295549 MAPRE1Q15691 268 aaKnown RBP24.09■■□□□ 1.45
LINC01116-201ENST00000295549 EFHBQ8N7U6 833 aa24.09■■□□□ 1.45
LINC01116-201ENST00000295549 B3GALNT2Q8NCR0 500 aa24.09■■□□□ 1.45
LINC01116-201ENST00000295549 PCMTD1Q96MG8 357 aaPredicted RBP24.09■■□□□ 1.45
LINC01116-201ENST00000295549 XPO4Q9C0E2 1151 aaKnown RBP24.09■■□□□ 1.45
LINC01116-201ENST00000295549 DNAI2Q9GZS0 605 aa24.09■■□□□ 1.45
LINC01116-201ENST00000295549 GANQ9H2C0 597 aa24.09■■□□□ 1.45
LINC01116-201ENST00000295549 CRTAC1Q9NQ79 661 aa24.09■■□□□ 1.45
LINC01116-201ENST00000295549 HMGXB4Q9UGU5 601 aa24.09■■□□□ 1.45
LINC01116-201ENST00000295549 AFF4Q9UHB7 1163 aaKnown RBP24.09■■□□□ 1.45
LINC01116-201ENST00000295549 CNTN6Q9UQ52 1028 aa24.09■■□□□ 1.45
LINC01116-201ENST00000295549 HCFC2Q9Y5Z7 792 aa24.09■■□□□ 1.45
LINC01116-201ENST00000295549 MYBPHLA2RUH7 354 aa24.08■■□□□ 1.44
LINC01116-201ENST00000295549 ATP2C2O75185 946 aa24.08■■□□□ 1.44
LINC01116-201ENST00000295549 ATF2P15336 505 aa24.08■■□□□ 1.44
LINC01116-201ENST00000295549 TRIM21P19474 475 aaKnown RBP24.08■■□□□ 1.44
LINC01116-201ENST00000295549 COL19A1Q14993 1142 aa24.08■■□□□ 1.44
LINC01116-201ENST00000295549 NFE2Q16621 373 aaPredicted RBP24.08■■□□□ 1.44
LINC01116-201ENST00000295549 SLC39A12Q504Y0 691 aa24.08■■□□□ 1.44
LINC01116-201ENST00000295549 IQCEQ6IPM2 695 aa24.08■■□□□ 1.44
LINC01116-201ENST00000295549 NEK11Q8NG66 645 aa24.08■■□□□ 1.44
LINC01116-201ENST00000295549 MYCBPAPQ8TBZ2 947 aa24.08■■□□□ 1.44
LINC01116-201ENST00000295549 SHC3Q92529 594 aa24.08■■□□□ 1.44
LINC01116-201ENST00000295549 TWNKQ96RR1 684 aa24.08■■□□□ 1.44
LINC01116-201ENST00000295549 ELOVL4Q9GZR5 314 aa24.08■■□□□ 1.44
LINC01116-201ENST00000295549 DPEP3Q9H4B8 488 aa24.08■■□□□ 1.44
LINC01116-201ENST00000295549 GTF3C4Q9UKN8 822 aa24.08■■□□□ 1.44
LINC01116-201ENST00000295549 GTF2F1P35269 517 aaKnown RBP eCLIP24.07■■□□□ 1.44
LINC01116-201ENST00000295549 RAD23BP54727 409 aa24.07■■□□□ 1.44
Retrieved 100 of 20,778 RNA–protein pairs in 23.7 ms