RNA–Protein interactions for RNA: ENST00000293889.10

CCDC78-201, Transcript of coiled-coil domain containing 78, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene CCDC78, Length 1,611 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC78-201ENST00000293889 SF3B1O75533 1304 aaKnown RBP eCLIP18.96■□□□□ 0.63
CCDC78-201ENST00000293889 CALCAP01258 141 aa18.96■□□□□ 0.63
CCDC78-201ENST00000293889 GNL1P36915 607 aaPredicted RBP18.96■□□□□ 0.63
CCDC78-201ENST00000293889 RAD23BP54727 409 aa18.96■□□□□ 0.63
CCDC78-201ENST00000293889 ORC1Q13415 861 aa18.96■□□□□ 0.63
CCDC78-201ENST00000293889 HGSNATQ68CP4 663 aa18.96■□□□□ 0.63
CCDC78-201ENST00000293889 SMYD5Q6GMV2 418 aa18.96■□□□□ 0.63
CCDC78-201ENST00000293889 FUT10Q6P4F1 479 aa18.96■□□□□ 0.63
CCDC78-201ENST00000293889 SLC47A2Q86VL8 602 aa18.96■□□□□ 0.63
CCDC78-201ENST00000293889 FMNL3Q8IVF7 1028 aa18.96■□□□□ 0.63
CCDC78-201ENST00000293889 TMEM86AQ8N2M4 240 aa18.96■□□□□ 0.63
CCDC78-201ENST00000293889 ELOVL4Q9GZR5 314 aa18.96■□□□□ 0.63
CCDC78-201ENST00000293889 SNX25Q9H3E2 840 aa18.96■□□□□ 0.63
CCDC78-201ENST00000293889 AAASQ9NRG9 546 aa18.96■□□□□ 0.63
CCDC78-201ENST00000293889 SPG21Q9NZD8 308 aa18.96■□□□□ 0.63
CCDC78-201ENST00000293889 GABRDO14764 452 aa18.95■□□□□ 0.62
CCDC78-201ENST00000293889 HCRTO43612 131 aa18.95■□□□□ 0.62
CCDC78-201ENST00000293889 EFEMP2O95967 443 aa18.95■□□□□ 0.62
CCDC78-201ENST00000293889 SERPING1P05155 500 aa18.95■□□□□ 0.62
CCDC78-201ENST00000293889 FECHP22830 423 aa18.95■□□□□ 0.62
CCDC78-201ENST00000293889 LMO2P25791 158 aa18.95■□□□□ 0.62
CCDC78-201ENST00000293889 TKTP29401 623 aaKnown RBP18.95■□□□□ 0.62
CCDC78-201ENST00000293889 FAM171A1Q5VUB5 890 aa18.95■□□□□ 0.62
CCDC78-201ENST00000293889 CHP1Q99653 195 aa18.95■□□□□ 0.62
CCDC78-201ENST00000293889 C17orf80Q9BSJ5 609 aa18.95■□□□□ 0.62
CCDC78-201ENST00000293889 VN1R3Q9BXE9 311 aa18.95■□□□□ 0.62
CCDC78-201ENST00000293889 DSEQ9UL01 958 aa18.95■□□□□ 0.62
CCDC78-201ENST00000293889 STXBP5LQ9Y2K9 1186 aa18.95■□□□□ 0.62
CCDC78-201ENST00000293889 COL4A4P53420 1690 aaPredicted RBP18.94■□□□□ 0.62
CCDC78-201ENST00000293889 ARHGEF37A1IGU5 675 aa18.94■□□□□ 0.62
CCDC78-201ENST00000293889 CARNS1A5YM72 827 aa18.94■□□□□ 0.62
CCDC78-201ENST00000293889 USP27XA6NNY8 438 aa18.94■□□□□ 0.62
CCDC78-201ENST00000293889 NRDCO43847 1150 aa18.94■□□□□ 0.62
CCDC78-201ENST00000293889 PDGFRBP09619 1106 aa18.94■□□□□ 0.62
CCDC78-201ENST00000293889 CCDC172P0C7W6 258 aa18.94■□□□□ 0.62
CCDC78-201ENST00000293889 TYMPP19971 482 aa18.94■□□□□ 0.62
CCDC78-201ENST00000293889 PRKCIP41743 596 aa18.94■□□□□ 0.62
CCDC78-201ENST00000293889 CDK17Q00537 523 aa18.94■□□□□ 0.62
CCDC78-201ENST00000293889 KLHL30Q0D2K2 578 aa18.94■□□□□ 0.62
CCDC78-201ENST00000293889 ELAVL2Q12926 359 aaKnown RBP18.94■□□□□ 0.62
CCDC78-201ENST00000293889 TAS1R1Q7RTX1 841 aa18.94■□□□□ 0.62
CCDC78-201ENST00000293889 UNC93AQ86WB7 457 aa18.94■□□□□ 0.62
CCDC78-201ENST00000293889 METTL23Q86XA0 190 aa18.94■□□□□ 0.62
CCDC78-201ENST00000293889 TMEM139Q8IV31 216 aa18.94■□□□□ 0.62
CCDC78-201ENST00000293889 SLC4A11Q8NBS3 891 aa18.94■□□□□ 0.62
CCDC78-201ENST00000293889 BAG1Q99933 345 aaPredicted RBP18.94■□□□□ 0.62
CCDC78-201ENST00000293889 NT5C1AQ9BXI3 368 aa18.94■□□□□ 0.62
CCDC78-201ENST00000293889 ZNF576Q9H609 170 aa18.94■□□□□ 0.62
CCDC78-201ENST00000293889 CERS4Q9HA82 394 aa18.94■□□□□ 0.62
CCDC78-201ENST00000293889 ARHGAP20Q9P2F6 1191 aa18.94■□□□□ 0.62
CCDC78-201ENST00000293889 PCDHB12Q9Y5F1 795 aa18.94■□□□□ 0.62
CCDC78-201ENST00000293889 A8MXQ7 604 aa18.93■□□□□ 0.62
CCDC78-201ENST00000293889 SYN3O14994 580 aa18.93■□□□□ 0.62
CCDC78-201ENST00000293889 CCP110O43303 1012 aa18.93■□□□□ 0.62
CCDC78-201ENST00000293889 PLEKP08567 350 aaPredicted RBP18.93■□□□□ 0.62
CCDC78-201ENST00000293889 FGFR3P22607 806 aa18.93■□□□□ 0.62
CCDC78-201ENST00000293889 LHX1P48742 406 aa18.93■□□□□ 0.62
CCDC78-201ENST00000293889 PTK2Q05397 1052 aa18.93■□□□□ 0.62
CCDC78-201ENST00000293889 SPATA18Q8TC71 538 aa18.93■□□□□ 0.62
CCDC78-201ENST00000293889 TMEM169Q96HH4 297 aa18.93■□□□□ 0.62
CCDC78-201ENST00000293889 TMEM176AQ96HP8 235 aa18.93■□□□□ 0.62
CCDC78-201ENST00000293889 B3GALT6Q96L58 329 aa18.93■□□□□ 0.62
CCDC78-201ENST00000293889 RTP3Q9BQQ7 232 aa18.93■□□□□ 0.62
CCDC78-201ENST00000293889 DPEP3Q9H4B8 488 aa18.93■□□□□ 0.62
CCDC78-201ENST00000293889 HAUS4Q9H6D7 363 aa18.93■□□□□ 0.62
CCDC78-201ENST00000293889 DDX43Q9NXZ2 648 aaKnown RBP18.93■□□□□ 0.62
CCDC78-201ENST00000293889 MTUS1Q9ULD2 1270 aa18.93■□□□□ 0.62
CCDC78-201ENST00000293889 PLXNA4Q9HCM2 1894 aa18.93■□□□□ 0.62
CCDC78-201ENST00000293889 TSC2P49815 1807 aa18.93■□□□□ 0.62
CCDC78-201ENST00000293889 TRANK1O15050 2925 aa18.93■□□□□ 0.62
CCDC78-201ENST00000293889 PAEPP09466 180 aa18.92■□□□□ 0.62
CCDC78-201ENST00000293889 CYP11B1P15538 503 aa18.92■□□□□ 0.62
CCDC78-201ENST00000293889 PPM1AP35813 382 aa18.92■□□□□ 0.62
CCDC78-201ENST00000293889 BPIFB4P59827 614 aa18.92■□□□□ 0.62
CCDC78-201ENST00000293889 ERVK-21P61565 698 aa18.92■□□□□ 0.62
CCDC78-201ENST00000293889 OVOS1Q6IE37 1185 aa18.92■□□□□ 0.62
CCDC78-201ENST00000293889 ACOT1Q86TX2 421 aa18.92■□□□□ 0.62
CCDC78-201ENST00000293889 NOP9Q86U38 636 aaKnown RBP18.92■□□□□ 0.62
CCDC78-201ENST00000293889 CEP57Q86XR8 500 aa18.92■□□□□ 0.62
CCDC78-201ENST00000293889 EPS8L1Q8TE68 723 aa18.92■□□□□ 0.62
CCDC78-201ENST00000293889 TGS1Q96RS0 853 aaKnown RBP18.92■□□□□ 0.62
CCDC78-201ENST00000293889 NOCTQ9UK39 431 aaKnown RBP18.92■□□□□ 0.62
CCDC78-201ENST00000293889 BZW2Q9Y6E2 419 aaKnown RBP18.92■□□□□ 0.62
CCDC78-201ENST00000293889 TMEM265A0A087WTH1 108 aa18.92■□□□□ 0.62
CCDC78-201ENST00000293889 EPOPA6NHQ4 379 aa18.92■□□□□ 0.62
CCDC78-201ENST00000293889 OAZ2O95190 189 aa18.92■□□□□ 0.62
CCDC78-201ENST00000293889 ACAT1P24752 427 aaKnown RBP18.92■□□□□ 0.62
CCDC78-201ENST00000293889 GNA15P30679 374 aa18.92■□□□□ 0.62
CCDC78-201ENST00000293889 BMPR1AP36894 532 aa18.92■□□□□ 0.62
CCDC78-201ENST00000293889 YWHAHQ04917 246 aaPredicted RBP18.92■□□□□ 0.62
CCDC78-201ENST00000293889 TDRD12Q587J7 1177 aaKnown RBP18.92■□□□□ 0.62
CCDC78-201ENST00000293889 GPR153Q6NV75 609 aa18.92■□□□□ 0.62
CCDC78-201ENST00000293889 CYP26C1Q6V0L0 522 aa18.92■□□□□ 0.62
CCDC78-201ENST00000293889 Q7L0L9 218 aa18.92■□□□□ 0.62
CCDC78-201ENST00000293889 ZNF571Q7Z3V5 609 aaPredicted RBP18.92■□□□□ 0.62
CCDC78-201ENST00000293889 TMTC1Q8IUR5 882 aa18.92■□□□□ 0.62
CCDC78-201ENST00000293889 RNF168Q8IYW5 571 aaPredicted RBP18.92■□□□□ 0.62
CCDC78-201ENST00000293889 KIF18AQ8NI77 898 aa18.92■□□□□ 0.62
CCDC78-201ENST00000293889 SLC20A1Q8WUM9 679 aa18.92■□□□□ 0.62
CCDC78-201ENST00000293889 TFAP2BQ92481 460 aa18.92■□□□□ 0.62
Retrieved 100 of 20,778 RNA–protein pairs in 18.7 ms