RNA–Protein interactions for RNA: ENST00000293880.9

SSRP1-202, Transcript of structure specific recognition protein 1, humanhuman

TSL 2

Gene SSRP1, Length 6,296 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSRP1-202ENST00000293880 OR6J1Q8NGC5 347 aa16.81■□□□□ 0.28
SSRP1-202ENST00000293880 SCFD1Q8WVM8 642 aa16.81■□□□□ 0.28
SSRP1-202ENST00000293880 MASTLQ96GX5 879 aa16.81■□□□□ 0.28
SSRP1-202ENST00000293880 FAM111AQ96PZ2 611 aa16.81■□□□□ 0.28
SSRP1-202ENST00000293880 CACNA2D2Q9NY47 1150 aa16.81■□□□□ 0.28
SSRP1-202ENST00000293880 GTF2A1LQ9UNN4 478 aa16.81■□□□□ 0.28
SSRP1-202ENST00000293880 MTO1Q9Y2Z2 717 aaKnown RBP16.81■□□□□ 0.28
SSRP1-202ENST00000293880 F5H6K3 240 aa16.81■□□□□ 0.28
SSRP1-202ENST00000293880 UPP2O95045 317 aa16.81■□□□□ 0.28
SSRP1-202ENST00000293880 SRGNP10124 158 aa16.81■□□□□ 0.28
SSRP1-202ENST00000293880 KLRC3Q07444 240 aa16.81■□□□□ 0.28
SSRP1-202ENST00000293880 PGS1Q32NB8 556 aa16.81■□□□□ 0.28
SSRP1-202ENST00000293880 OLFML1Q6UWY5 402 aa16.81■□□□□ 0.28
SSRP1-202ENST00000293880 MICU2Q8IYU8 434 aa16.81■□□□□ 0.28
SSRP1-202ENST00000293880 GUF1Q8N442 669 aaKnown RBP16.81■□□□□ 0.28
SSRP1-202ENST00000293880 DTNAQ9Y4J8 743 aa16.81■□□□□ 0.28
SSRP1-202ENST00000293880 A0A0G2JLW4 131 aa16.81■□□□□ 0.28
SSRP1-202ENST00000293880 CAPZA2P47755 286 aa16.81■□□□□ 0.28
SSRP1-202ENST00000293880 AGBL2Q5U5Z8 902 aa16.81■□□□□ 0.28
SSRP1-202ENST00000293880 ISLR2Q6UXK2 745 aa16.81■□□□□ 0.28
SSRP1-202ENST00000293880 SYDE1Q6ZW31 735 aaPredicted RBP16.81■□□□□ 0.28
SSRP1-202ENST00000293880 FGD2Q7Z6J4 655 aa16.81■□□□□ 0.28
SSRP1-202ENST00000293880 TRIM69Q86WT6 500 aa16.81■□□□□ 0.28
SSRP1-202ENST00000293880 KAT2BQ92831 832 aa16.81■□□□□ 0.28
SSRP1-202ENST00000293880 PNMA3Q9UL41 463 aa16.81■□□□□ 0.28
SSRP1-202ENST00000293880 BATF3Q9NR55 127 aa16.81■□□□□ 0.28
SSRP1-202ENST00000293880 SCN3BQ9NY72 215 aa16.81■□□□□ 0.28
SSRP1-202ENST00000293880 DNALI1O14645 258 aaPredicted RBP16.81■□□□□ 0.28
SSRP1-202ENST00000293880 UCHL3P15374 230 aa16.81■□□□□ 0.28
SSRP1-202ENST00000293880 SLC29A2Q14542 456 aa16.81■□□□□ 0.28
SSRP1-202ENST00000293880 NR1I3Q14994 352 aa16.81■□□□□ 0.28
SSRP1-202ENST00000293880 E2F7Q96AV8 911 aa16.81■□□□□ 0.28
SSRP1-202ENST00000293880 MEI4A8MW99 385 aa16.8■□□□□ 0.28
SSRP1-202ENST00000293880 SLC16A3O15427 465 aaKnown RBP16.8■□□□□ 0.28
SSRP1-202ENST00000293880 HSD17B3P37058 310 aa16.8■□□□□ 0.28
SSRP1-202ENST00000293880 RUNX1T1Q06455 604 aa16.8■□□□□ 0.28
SSRP1-202ENST00000293880 LRRC71Q8N4P6 559 aa16.8■□□□□ 0.28
SSRP1-202ENST00000293880 PNKPQ96T60 521 aa16.8■□□□□ 0.28
SSRP1-202ENST00000293880 STK33Q9BYT3 514 aa16.8■□□□□ 0.28
SSRP1-202ENST00000293880 ARHGEF5Q12774 1597 aa16.8■□□□□ 0.28
SSRP1-202ENST00000293880 ZNF197O14709 1029 aa16.8■□□□□ 0.28
SSRP1-202ENST00000293880 EYA4O95677 639 aa16.8■□□□□ 0.28
SSRP1-202ENST00000293880 GTF2H1P32780 548 aa16.8■□□□□ 0.28
SSRP1-202ENST00000293880 TWF1Q12792 350 aa16.8■□□□□ 0.28
SSRP1-202ENST00000293880 SNRNP35Q16560 246 aaKnown RBP16.8■□□□□ 0.28
SSRP1-202ENST00000293880 SEZ6Q53EL9 994 aa16.8■□□□□ 0.28
SSRP1-202ENST00000293880 SPATA18Q8TC71 538 aa16.8■□□□□ 0.28
SSRP1-202ENST00000293880 PHTF1Q9UMS5 762 aa16.8■□□□□ 0.28
SSRP1-202ENST00000293880 MYMKA6NI61 221 aa16.8■□□□□ 0.28
SSRP1-202ENST00000293880 RSPH10B2B2RC85 870 aa16.8■□□□□ 0.28
SSRP1-202ENST00000293880 RSPH10BP0C881 870 aa16.8■□□□□ 0.28
SSRP1-202ENST00000293880 NCOA4Q13772 614 aa16.8■□□□□ 0.28
SSRP1-202ENST00000293880 KCNK16Q96T55 309 aa16.8■□□□□ 0.28
SSRP1-202ENST00000293880 JPH1Q9HDC5 661 aaPredicted RBP16.8■□□□□ 0.28
SSRP1-202ENST00000293880 CD209Q9NNX6 404 aa16.8■□□□□ 0.28
SSRP1-202ENST00000293880 AATKQ6ZMQ8 1374 aa16.8■□□□□ 0.28
SSRP1-202ENST00000293880 KRT87PA6NCN2 255 aa16.8■□□□□ 0.28
SSRP1-202ENST00000293880 UXS1Q8NBZ7 420 aa16.8■□□□□ 0.28
SSRP1-202ENST00000293880 SH3TC2Q8TF17 1288 aa16.8■□□□□ 0.28
SSRP1-202ENST00000293880 KIF1BO60333 1816 aa16.79■□□□□ 0.28
SSRP1-202ENST00000293880 MBD5Q9P267 1494 aa16.79■□□□□ 0.28
SSRP1-202ENST00000293880 ANKRD49Q8WVL7 239 aa16.79■□□□□ 0.28
SSRP1-202ENST00000293880 CMTM5Q96DZ9 223 aa16.79■□□□□ 0.28
SSRP1-202ENST00000293880 SENP2Q9HC62 589 aa16.79■□□□□ 0.28
SSRP1-202ENST00000293880 KLHL2O95198 593 aa16.79■□□□□ 0.28
SSRP1-202ENST00000293880 VHLP40337 213 aa16.79■□□□□ 0.28
SSRP1-202ENST00000293880 PTRHD1Q6GMV3 140 aaKnown RBP16.79■□□□□ 0.28
SSRP1-202ENST00000293880 CENPPQ6IPU0 288 aa16.79■□□□□ 0.28
SSRP1-202ENST00000293880 SLC44A2Q8IWA5 706 aaPredicted RBP16.79■□□□□ 0.28
SSRP1-202ENST00000293880 UNC45BQ8IWX7 931 aa16.79■□□□□ 0.28
SSRP1-202ENST00000293880 OR8H2Q8N162 312 aa16.79■□□□□ 0.28
SSRP1-202ENST00000293880 RAB42Q8N4Z0 105 aa16.79■□□□□ 0.28
SSRP1-202ENST00000293880 ATG4AQ8WYN0 398 aa16.79■□□□□ 0.28
SSRP1-202ENST00000293880 PTPRHQ9HD43 1115 aa16.79■□□□□ 0.28
SSRP1-202ENST00000293880 RARBP10826 455 aa16.79■□□□□ 0.28
SSRP1-202ENST00000293880 CHRM3P20309 590 aa16.79■□□□□ 0.28
SSRP1-202ENST00000293880 PBLDP30039 288 aaPredicted RBP16.79■□□□□ 0.28
SSRP1-202ENST00000293880 GLRBP48167 497 aa16.79■□□□□ 0.28
SSRP1-202ENST00000293880 TMEM132DQ14C87 1099 aa16.79■□□□□ 0.28
SSRP1-202ENST00000293880 VN1R5Q7Z5H4 357 aa16.79■□□□□ 0.28
SSRP1-202ENST00000293880 RUVBL2Q9Y230 463 aaKnown RBP16.79■□□□□ 0.28
SSRP1-202ENST00000293880 TSC22D1Q15714 1073 aa16.79■□□□□ 0.28
SSRP1-202ENST00000293880 YAF2Q8IY57 180 aa16.79■□□□□ 0.28
SSRP1-202ENST00000293880 C10orf53Q8N6V4 93 aa16.79■□□□□ 0.28
SSRP1-202ENST00000293880 TC2NQ8N9U0 490 aa16.79■□□□□ 0.28
SSRP1-202ENST00000293880 ATP7BP35670 1465 aa16.79■□□□□ 0.28
SSRP1-202ENST00000293880 GEMIN4P57678 1058 aaKnown RBP16.79■□□□□ 0.28
SSRP1-202ENST00000293880 TRADDQ15628 312 aa16.79■□□□□ 0.28
SSRP1-202ENST00000293880 PLEKHA7Q6IQ23 1121 aa16.79■□□□□ 0.28
SSRP1-202ENST00000293880 ENOSF1Q7L5Y1 443 aa16.79■□□□□ 0.28
SSRP1-202ENST00000293880 LDHDQ86WU2 507 aa16.79■□□□□ 0.28
SSRP1-202ENST00000293880 TSPAN17Q96FV3 270 aa16.79■□□□□ 0.28
SSRP1-202ENST00000293880 NOL6Q9H6R4 1146 aaKnown RBP16.79■□□□□ 0.28
SSRP1-202ENST00000293880 NCALDP61601 193 aa16.78■□□□□ 0.28
SSRP1-202ENST00000293880 NANOGNBQ7Z5D8 188 aa16.78■□□□□ 0.28
SSRP1-202ENST00000293880 DNAAF5Q86Y56 855 aa16.78■□□□□ 0.28
SSRP1-202ENST00000293880 NARS2Q96I59 477 aaKnown RBP16.78■□□□□ 0.28
SSRP1-202ENST00000293880 ZNF521Q96K83 1311 aa16.78■□□□□ 0.28
SSRP1-202ENST00000293880 DCAF6Q58WW2 860 aa16.78■□□□□ 0.28
SSRP1-202ENST00000293880 POTEAQ6S8J7 498 aa16.78■□□□□ 0.28
Retrieved 100 of 20,778 RNA–protein pairs in 23.3 ms