RNA–Protein interactions for RNA: ENST00000291547.9

PKNOX1-201, Transcript of PBX/knotted 1 homeobox 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PKNOX1, Length 5,003 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PKNOX1-201ENST00000291547 HIST1H2AHQ96KK5 128 aa11.21□□□□□ -0.61
PKNOX1-201ENST00000291547 HIST1H2AJQ99878 128 aa11.21□□□□□ -0.61
PKNOX1-201ENST00000291547 H2AFJQ9BTM1 129 aa11.21□□□□□ -0.61
PKNOX1-201ENST00000291547 FAM192AQ9GZU8 254 aa11.21□□□□□ -0.61
PKNOX1-201ENST00000291547 RBAKQ9NYW8 714 aaPredicted RBP11.21□□□□□ -0.61
PKNOX1-201ENST00000291547 SSU72P8A0A1W2PR75 194 aa11.21□□□□□ -0.61
PKNOX1-201ENST00000291547 P4HBP07237 508 aaKnown RBP11.21□□□□□ -0.61
PKNOX1-201ENST00000291547 DNAJC3Q13217 504 aa11.21□□□□□ -0.61
PKNOX1-201ENST00000291547 ANKS3Q6ZW76 656 aa11.21□□□□□ -0.61
PKNOX1-201ENST00000291547 DHX30Q7L2E3 1194 aaKnown RBP eCLIP11.21□□□□□ -0.611e-6■■■□□ 16
PKNOX1-201ENST00000291547 ARID3BQ8IVW6 561 aaPredicted RBP11.21□□□□□ -0.61
PKNOX1-201ENST00000291547 PTPRN2Q92932 1015 aa11.21□□□□□ -0.61
PKNOX1-201ENST00000291547 E2F7Q96AV8 911 aa11.21□□□□□ -0.61
PKNOX1-201ENST00000291547 NDEL1Q9GZM8 345 aa11.21□□□□□ -0.61
PKNOX1-201ENST00000291547 TRIM10Q9UDY6 481 aa11.21□□□□□ -0.61
PKNOX1-201ENST00000291547 XPO7Q9UIA9 1087 aaKnown RBP11.21□□□□□ -0.61
PKNOX1-201ENST00000291547 NEDD4P46934 1319 aa11.21□□□□□ -0.62
PKNOX1-201ENST00000291547 A0A1B0GTH6 734 aa11.21□□□□□ -0.62
PKNOX1-201ENST00000291547 SKAP2O75563 359 aaPredicted RBP11.21□□□□□ -0.62
PKNOX1-201ENST00000291547 RTN3O95197 1032 aaPredicted RBP11.21□□□□□ -0.62
PKNOX1-201ENST00000291547 GUCA1CO95843 209 aa11.21□□□□□ -0.62
PKNOX1-201ENST00000291547 FESP07332 822 aa11.21□□□□□ -0.62
PKNOX1-201ENST00000291547 PDHBP11177 359 aa11.21□□□□□ -0.62
PKNOX1-201ENST00000291547 MAGEA4P43358 317 aa11.21□□□□□ -0.62
PKNOX1-201ENST00000291547 HSPA13P48723 471 aa11.21□□□□□ -0.62
PKNOX1-201ENST00000291547 FXR1P51114 621 aaKnown RBP eCLIP11.21□□□□□ -0.62
PKNOX1-201ENST00000291547 ARHGAP17Q68EM7 881 aa11.21□□□□□ -0.62
PKNOX1-201ENST00000291547 GPR141Q7Z602 305 aa11.21□□□□□ -0.62
PKNOX1-201ENST00000291547 RBM12BQ8IXT5 1001 aaKnown RBP11.21□□□□□ -0.62
PKNOX1-201ENST00000291547 NOA1Q8NC60 698 aaKnown RBP11.21□□□□□ -0.62
PKNOX1-201ENST00000291547 DDI1Q8WTU0 396 aa11.21□□□□□ -0.62
PKNOX1-201ENST00000291547 SHCBP1LQ9BZQ2 653 aa11.21□□□□□ -0.62
PKNOX1-201ENST00000291547 MMADHCQ9H3L0 296 aaPredicted RBP11.21□□□□□ -0.62
PKNOX1-201ENST00000291547 ARHGEF38Q9NXL2 777 aa11.21□□□□□ -0.62
PKNOX1-201ENST00000291547 SELENONQ9NZV5 590 aa11.21□□□□□ -0.62
PKNOX1-201ENST00000291547 UVRAGQ9P2Y5 699 aa11.21□□□□□ -0.62
PKNOX1-201ENST00000291547 CDY2AQ9Y6F7 541 aa11.21□□□□□ -0.62
PKNOX1-201ENST00000291547 CDY1Q9Y6F8 540 aa11.21□□□□□ -0.62
PKNOX1-201ENST00000291547 E2F8A0AVK6 867 aa11.2□□□□□ -0.62
PKNOX1-201ENST00000291547 RNF103O00237 685 aa11.2□□□□□ -0.62
PKNOX1-201ENST00000291547 TARSP26639 723 aaKnown RBP11.2□□□□□ -0.62
PKNOX1-201ENST00000291547 SCTRP47872 440 aa11.2□□□□□ -0.62
PKNOX1-201ENST00000291547 DSG1Q02413 1049 aa11.2□□□□□ -0.62
PKNOX1-201ENST00000291547 MTM1Q13496 603 aa11.2□□□□□ -0.62
PKNOX1-201ENST00000291547 C3orf62Q6ZUJ4 267 aa11.2□□□□□ -0.62
PKNOX1-201ENST00000291547 ARHGAP27Q6ZUM4 889 aa11.2□□□□□ -0.62
PKNOX1-201ENST00000291547 CCDC149Q6ZUS6 474 aa11.2□□□□□ -0.62
PKNOX1-201ENST00000291547 TTLL6Q8N841 843 aa11.2□□□□□ -0.62
PKNOX1-201ENST00000291547 SHCBP1Q8NEM2 672 aa11.2□□□□□ -0.62
PKNOX1-201ENST00000291547 APPL2Q8NEU8 664 aa11.2□□□□□ -0.62
PKNOX1-201ENST00000291547 SLC30A5Q8TAD4 765 aa11.2□□□□□ -0.62
PKNOX1-201ENST00000291547 MDM1Q8TC05 714 aa11.2□□□□□ -0.62
PKNOX1-201ENST00000291547 TSPAN17Q96FV3 270 aa11.2□□□□□ -0.62
PKNOX1-201ENST00000291547 VPS50Q96JG6 964 aa11.2□□□□□ -0.62
PKNOX1-201ENST00000291547 ZNF668Q96K58 619 aaPredicted RBP11.2□□□□□ -0.62
PKNOX1-201ENST00000291547 ZNF341Q9BYN7 854 aa11.2□□□□□ -0.62
PKNOX1-201ENST00000291547 RNPEPQ9H4A4 650 aa11.2□□□□□ -0.62
PKNOX1-201ENST00000291547 MANSC1Q9H8J5 431 aa11.2□□□□□ -0.62
PKNOX1-201ENST00000291547 USP1O94782 785 aa11.2□□□□□ -0.62
PKNOX1-201ENST00000291547 SPRP35270 261 aaPredicted RBP11.2□□□□□ -0.62
PKNOX1-201ENST00000291547 RFX5P48382 616 aaPredicted RBP11.2□□□□□ -0.62
PKNOX1-201ENST00000291547 NLRP11P59045 1033 aaKnown RBP11.2□□□□□ -0.62
PKNOX1-201ENST00000291547 WASHC5Q12768 1159 aa11.2□□□□□ -0.62
PKNOX1-201ENST00000291547 PWP1Q13610 501 aa11.2□□□□□ -0.62
PKNOX1-201ENST00000291547 METTL16Q86W50 562 aaKnown RBP11.2□□□□□ -0.62
PKNOX1-201ENST00000291547 WNK4Q96J92 1243 aa11.2□□□□□ -0.62
PKNOX1-201ENST00000291547 SLC4A9Q96Q91 983 aa11.2□□□□□ -0.62
PKNOX1-201ENST00000291547 FOXP3Q9BZS1 431 aa11.2□□□□□ -0.62
PKNOX1-201ENST00000291547 SYTL2Q9HCH5 934 aa11.2□□□□□ -0.62
PKNOX1-201ENST00000291547 LATS2Q9NRM7 1088 aa11.2□□□□□ -0.62
PKNOX1-201ENST00000291547 ZHX2Q9Y6X8 837 aa11.2□□□□□ -0.62
PKNOX1-201ENST00000291547 COPAP53621 1224 aa11.2□□□□□ -0.62
PKNOX1-201ENST00000291547 MTA1Q13330 715 aa11.2□□□□□ -0.62
PKNOX1-201ENST00000291547 TP53BP2Q13625 1128 aa11.2□□□□□ -0.62
PKNOX1-201ENST00000291547 DUOXA2Q1HG44 320 aa11.2□□□□□ -0.62
PKNOX1-201ENST00000291547 DCAF4Q8WV16 495 aa11.2□□□□□ -0.62
PKNOX1-201ENST00000291547 C18orf8Q96DM3 657 aa11.2□□□□□ -0.62
PKNOX1-201ENST00000291547 ELMO2Q96JJ3 720 aa11.2□□□□□ -0.62
PKNOX1-201ENST00000291547 OSBPL8Q9BZF1 889 aa11.2□□□□□ -0.62
PKNOX1-201ENST00000291547 ZBTB39O15060 712 aa11.2□□□□□ -0.62
PKNOX1-201ENST00000291547 FAM200BP0CF97 657 aa11.2□□□□□ -0.62
PKNOX1-201ENST00000291547 TPI1P60174 286 aa11.2□□□□□ -0.62
PKNOX1-201ENST00000291547 ORC2Q13416 577 aaPredicted RBP11.2□□□□□ -0.62
PKNOX1-201ENST00000291547 LMBRD2Q68DH5 695 aaPredicted RBP11.2□□□□□ -0.62
PKNOX1-201ENST00000291547 TMC5Q6UXY8 1006 aa11.2□□□□□ -0.62
PKNOX1-201ENST00000291547 HAUS6Q7Z4H7 955 aa11.2□□□□□ -0.62
PKNOX1-201ENST00000291547 FUKQ8N0W3 1084 aa11.2□□□□□ -0.62
PKNOX1-201ENST00000291547 GPD1LQ8N335 351 aa11.2□□□□□ -0.62
PKNOX1-201ENST00000291547 TADA1Q96BN2 335 aa11.2□□□□□ -0.62
PKNOX1-201ENST00000291547 AGPAT5Q9NUQ2 364 aa11.2□□□□□ -0.62
PKNOX1-201ENST00000291547 IMPAD1Q9NX62 359 aa11.2□□□□□ -0.62
PKNOX1-201ENST00000291547 GRID1Q9ULK0 1009 aa11.2□□□□□ -0.62
PKNOX1-201ENST00000291547 LMO7Q8WWI1 1683 aa11.2□□□□□ -0.62
PKNOX1-201ENST00000291547 RAD17O75943 681 aa11.19□□□□□ -0.62
PKNOX1-201ENST00000291547 ZBTB7AO95365 584 aa11.19□□□□□ -0.62
PKNOX1-201ENST00000291547 RALBP11234 206 aa11.19□□□□□ -0.62
PKNOX1-201ENST00000291547 KCNK10P57789 538 aa11.19□□□□□ -0.62
PKNOX1-201ENST00000291547 CDK17Q00537 523 aa11.19□□□□□ -0.62
PKNOX1-201ENST00000291547 EZH2Q15910 746 aaKnown RBP11.19□□□□□ -0.62
PKNOX1-201ENST00000291547 C11orf91Q3C1V1 193 aa11.19□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 27.4 ms