RNA–Protein interactions for RNA: ENST00000288840.9

SMAD6-201, Transcript of SMAD family member 6, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMAD6, Length 3,835 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD6-201ENST00000288840 TRIM72Q6ZMU5 477 aa16.73■□□□□ 0.27
SMAD6-201ENST00000288840 GLIS1Q8NBF1 620 aa16.73■□□□□ 0.27
SMAD6-201ENST00000288840 ATXN7L3BQ96GX2 97 aa16.73■□□□□ 0.27
SMAD6-201ENST00000288840 MMP13P45452 471 aa16.73■□□□□ 0.27
SMAD6-201ENST00000288840 GJC2Q5T442 439 aaPredicted RBP16.73■□□□□ 0.27
SMAD6-201ENST00000288840 EIF1ADQ8N9N8 165 aaKnown RBP16.73■□□□□ 0.27
SMAD6-201ENST00000288840 HIPK4Q8NE63 616 aa16.73■□□□□ 0.27
SMAD6-201ENST00000288840 NIF3L1Q9GZT8 377 aa16.73■□□□□ 0.27
SMAD6-201ENST00000288840 PDE4DIPQ5VU43 2346 aa16.73■□□□□ 0.27
SMAD6-201ENST00000288840 YWHAEP62258 255 aaKnown RBP16.72■□□□□ 0.27
SMAD6-201ENST00000288840 TAF11Q15544 211 aa16.72■□□□□ 0.27
SMAD6-201ENST00000288840 SLC39A4Q6P5W5 647 aa16.72■□□□□ 0.27
SMAD6-201ENST00000288840 NETO2Q8NC67 525 aa16.72■□□□□ 0.27
SMAD6-201ENST00000288840 DTX3LQ8TDB6 740 aa16.72■□□□□ 0.27
SMAD6-201ENST00000288840 SEPT1Q8WYJ6 367 aa16.72■□□□□ 0.27
SMAD6-201ENST00000288840 PHTF1Q9UMS5 762 aa16.72■□□□□ 0.27
SMAD6-201ENST00000288840 MROH7Q68CQ1 1323 aa16.72■□□□□ 0.27
SMAD6-201ENST00000288840 A8MUI8 341 aa16.72■□□□□ 0.27
SMAD6-201ENST00000288840 KCNN4O15554 427 aa16.72■□□□□ 0.27
SMAD6-201ENST00000288840 SNX3O60493 162 aa16.72■□□□□ 0.27
SMAD6-201ENST00000288840 TOM1L1O75674 476 aa16.72■□□□□ 0.27
SMAD6-201ENST00000288840 RFC1P35251 1148 aaPredicted RBP16.72■□□□□ 0.27
SMAD6-201ENST00000288840 CCNG2Q16589 344 aa16.72■□□□□ 0.27
SMAD6-201ENST00000288840 ZACNQ401N2 412 aa16.72■□□□□ 0.27
SMAD6-201ENST00000288840 SPOCD1Q6ZMY3 1216 aa16.72■□□□□ 0.27
SMAD6-201ENST00000288840 HERPUD2Q9BSE4 406 aa16.72■□□□□ 0.27
SMAD6-201ENST00000288840 APOBEC3GQ9HC16 384 aaKnown RBP16.72■□□□□ 0.27
SMAD6-201ENST00000288840 ZFP69BQ9UJL9 534 aa16.72■□□□□ 0.27
SMAD6-201ENST00000288840 CCDC78A2IDD5 438 aa16.72■□□□□ 0.27
SMAD6-201ENST00000288840 FSCN2O14926 492 aa16.72■□□□□ 0.27
SMAD6-201ENST00000288840 PLSCR1O15162 318 aa16.72■□□□□ 0.27
SMAD6-201ENST00000288840 SKAP2O75563 359 aaPredicted RBP16.72■□□□□ 0.27
SMAD6-201ENST00000288840 TXNP10599 105 aaKnown RBP16.72■□□□□ 0.27
SMAD6-201ENST00000288840 FSTL1Q12841 308 aa16.72■□□□□ 0.27
SMAD6-201ENST00000288840 MUM1Q2TAK8 710 aa16.72■□□□□ 0.27
SMAD6-201ENST00000288840 GLRA4Q5JXX5 417 aa16.72■□□□□ 0.27
SMAD6-201ENST00000288840 TXNRD3NBQ6F5E7 133 aa16.72■□□□□ 0.27
SMAD6-201ENST00000288840 COPS5Q92905 334 aa16.72■□□□□ 0.27
SMAD6-201ENST00000288840 LRRC19Q9H756 370 aa16.72■□□□□ 0.27
SMAD6-201ENST00000288840 ARHGAP42A6NI28 874 aa16.71■□□□□ 0.27
SMAD6-201ENST00000288840 LPXNO60711 386 aa16.71■□□□□ 0.27
SMAD6-201ENST00000288840 PDGFRBP09619 1106 aa16.71■□□□□ 0.27
SMAD6-201ENST00000288840 FKBP1AP62942 108 aaKnown RBP16.71■□□□□ 0.27
SMAD6-201ENST00000288840 SLC20A2Q08357 652 aa16.71■□□□□ 0.27
SMAD6-201ENST00000288840 FBXO16Q8IX29 292 aaPredicted RBP16.71■□□□□ 0.27
SMAD6-201ENST00000288840 TMEM130Q8N3G9 435 aa16.71■□□□□ 0.27
SMAD6-201ENST00000288840 RNF169Q8NCN4 708 aa16.71■□□□□ 0.27
SMAD6-201ENST00000288840 NSMCE1Q8WV22 266 aa16.71■□□□□ 0.27
SMAD6-201ENST00000288840 CPB2Q96IY4 423 aa16.71■□□□□ 0.27
SMAD6-201ENST00000288840 RAB3IPQ96QF0 476 aaPredicted RBP16.71■□□□□ 0.27
SMAD6-201ENST00000288840 STAU2Q9NUL3 570 aaKnown RBP eCLIP16.71■□□□□ 0.27
SMAD6-201ENST00000288840 CPP00450 1065 aa16.71■□□□□ 0.27
SMAD6-201ENST00000288840 COPS2P61201 443 aa16.71■□□□□ 0.27
SMAD6-201ENST00000288840 TMPRSS15P98073 1019 aa16.71■□□□□ 0.27
SMAD6-201ENST00000288840 GRM1Q13255 1194 aa16.71■□□□□ 0.27
SMAD6-201ENST00000288840 EFCAB12Q6NXP0 572 aa16.71■□□□□ 0.27
SMAD6-201ENST00000288840 FBXO36Q8NEA4 188 aa16.71■□□□□ 0.27
SMAD6-201ENST00000288840 CYP39A1Q9NYL5 469 aa16.71■□□□□ 0.27
SMAD6-201ENST00000288840 TNKS1BP1Q9C0C2 1729 aaKnown RBP16.71■□□□□ 0.27
SMAD6-201ENST00000288840 A0A1W2PPM1 405 aa16.71■□□□□ 0.27
SMAD6-201ENST00000288840 MED7O43513 233 aa16.71■□□□□ 0.27
SMAD6-201ENST00000288840 CBX6O95503 412 aa16.71■□□□□ 0.27
SMAD6-201ENST00000288840 P4HA1P13674 534 aa16.71■□□□□ 0.27
SMAD6-201ENST00000288840 DRG2P55039 364 aaKnown RBP16.71■□□□□ 0.27
SMAD6-201ENST00000288840 SGSM1Q2NKQ1 1148 aa16.71■□□□□ 0.27
SMAD6-201ENST00000288840 CFAP61Q8NHU2 1237 aa16.71■□□□□ 0.27
SMAD6-201ENST00000288840 AGR3Q8TD06 166 aa16.71■□□□□ 0.27
SMAD6-201ENST00000288840 CYTH2Q99418 400 aa16.71■□□□□ 0.27
SMAD6-201ENST00000288840 SLC24A3Q9HC58 644 aa16.71■□□□□ 0.27
SMAD6-201ENST00000288840 B4GALT5O43286 388 aa16.7■□□□□ 0.26
SMAD6-201ENST00000288840 ADORA2BP29275 332 aa16.7■□□□□ 0.26
SMAD6-201ENST00000288840 ALDH5A1P51649 535 aaPredicted RBP16.7■□□□□ 0.26
SMAD6-201ENST00000288840 BCAR1P56945 870 aa16.7■□□□□ 0.26
SMAD6-201ENST00000288840 NOMO3P69849 1222 aa16.7■□□□□ 0.26
SMAD6-201ENST00000288840 ATF7IP2Q5U623 682 aa16.7■□□□□ 0.26
SMAD6-201ENST00000288840 ATP11CQ8NB49 1132 aa16.7■□□□□ 0.26
SMAD6-201ENST00000288840 DHX35Q9H5Z1 703 aaKnown RBP16.7■□□□□ 0.26
SMAD6-201ENST00000288840 C17orf75Q9HAS0 396 aa16.7■□□□□ 0.26
SMAD6-201ENST00000288840 TXLNGQ9NUQ3 528 aa16.7■□□□□ 0.26
SMAD6-201ENST00000288840 SNX9Q9Y5X1 595 aa16.7■□□□□ 0.26
SMAD6-201ENST00000288840 TNRC6CQ9HCJ0 1690 aaKnown RBP16.7■□□□□ 0.26
SMAD6-201ENST00000288840 NPM3O75607 178 aaKnown RBP16.7■□□□□ 0.26
SMAD6-201ENST00000288840 PTPRAP18433 802 aa16.7■□□□□ 0.26
SMAD6-201ENST00000288840 RPA3P35244 121 aaPredicted RBP16.7■□□□□ 0.26
SMAD6-201ENST00000288840 WNT7BP56706 349 aa16.7■□□□□ 0.26
SMAD6-201ENST00000288840 CENPCQ03188 943 aa16.7■□□□□ 0.26
SMAD6-201ENST00000288840 RNASELQ05823 741 aaKnown RBP16.7■□□□□ 0.26
SMAD6-201ENST00000288840 EFTUD2Q15029 972 aaKnown RBP eCLIP16.7■□□□□ 0.26
SMAD6-201ENST00000288840 TFDP3Q5H9I0 405 aa16.7■□□□□ 0.26
SMAD6-201ENST00000288840 DPY19L2P1Q6NXN4 242 aa16.7■□□□□ 0.26
SMAD6-201ENST00000288840 TEX2Q8IWB9 1127 aa16.7■□□□□ 0.26
SMAD6-201ENST00000288840 PDCD7Q8N8D1 485 aaKnown RBP16.7■□□□□ 0.26
SMAD6-201ENST00000288840 DCPSQ96C86 337 aaKnown RBP16.7■□□□□ 0.26
SMAD6-201ENST00000288840 TLCD1Q96CP7 247 aa16.7■□□□□ 0.26
SMAD6-201ENST00000288840 FAM111AQ96PZ2 611 aa16.7■□□□□ 0.26
SMAD6-201ENST00000288840 NOP53Q9NZM5 478 aaKnown RBP16.7■□□□□ 0.26
SMAD6-201ENST00000288840 PPARGC1AQ9UBK2 798 aaKnown RBP16.7■□□□□ 0.26
SMAD6-201ENST00000288840 A6NJR5 290 aa16.7■□□□□ 0.26
SMAD6-201ENST00000288840 NQO1P15559 274 aaKnown RBP16.7■□□□□ 0.26
SMAD6-201ENST00000288840 RASSF2P50749 326 aa16.7■□□□□ 0.26
Retrieved 100 of 20,778 RNA–protein pairs in 83.9 ms