RNA–Protein interactions for RNA: ENST00000284049.7

CHD1-201, Transcript of chromodomain helicase DNA binding protein 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CHD1, Length 6,457 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD1-201ENST00000284049 TXLNGYQ9BZA5 131 aa2.98□□□□□ -1.93
CHD1-201ENST00000284049 RABL2AQ9UBK7 228 aaPredicted RBP2.98□□□□□ -1.93
CHD1-201ENST00000284049 PCDHB4Q9Y5E5 795 aa2.98□□□□□ -1.93
CHD1-201ENST00000284049 A0A1W2PPC4 97 aa2.98□□□□□ -1.93
CHD1-201ENST00000284049 TGDSO95455 350 aa2.98□□□□□ -1.93
CHD1-201ENST00000284049 PDHA1P08559 390 aa2.98□□□□□ -1.93
CHD1-201ENST00000284049 MSX2P35548 267 aaPredicted RBP2.98□□□□□ -1.93
CHD1-201ENST00000284049 TXKP42681 527 aa2.98□□□□□ -1.93
CHD1-201ENST00000284049 POLGP54098 1239 aaPredicted RBP2.98□□□□□ -1.93
CHD1-201ENST00000284049 MRPS9P82933 396 aaKnown RBP2.98□□□□□ -1.93
CHD1-201ENST00000284049 TUSC3Q13454 348 aa2.98□□□□□ -1.93
CHD1-201ENST00000284049 ADRM1Q16186 407 aa2.98□□□□□ -1.93
CHD1-201ENST00000284049 BTBD16Q32M84 506 aa2.98□□□□□ -1.93
CHD1-201ENST00000284049 ETFRF1Q6IPR1 90 aa2.98□□□□□ -1.93
CHD1-201ENST00000284049 TEX9Q8N6V9 391 aa2.98□□□□□ -1.93
CHD1-201ENST00000284049 ANP32BQ92688 251 aaKnown RBP2.98□□□□□ -1.93
CHD1-201ENST00000284049 COX4I2Q96KJ9 171 aa2.98□□□□□ -1.93
CHD1-201ENST00000284049 ERVMER34-1Q9H9K5 563 aa2.98□□□□□ -1.93
CHD1-201ENST00000284049 GGA3Q9NZ52 723 aa2.98□□□□□ -1.93
CHD1-201ENST00000284049 DCCP43146 1447 aa2.98□□□□□ -1.93
CHD1-201ENST00000284049 INO80B-WBP1J3KQ70 363 aa2.98□□□□□ -1.93
CHD1-201ENST00000284049 SPTLC2O15270 562 aa2.98□□□□□ -1.93
CHD1-201ENST00000284049 PHF2O75151 1096 aa2.98□□□□□ -1.93
CHD1-201ENST00000284049 LRRN2O75325 713 aa2.98□□□□□ -1.93
CHD1-201ENST00000284049 MYF5P13349 255 aa2.98□□□□□ -1.93
CHD1-201ENST00000284049 GLULP15104 373 aa2.98□□□□□ -1.93
CHD1-201ENST00000284049 PDIA3P30101 505 aaKnown RBP2.98□□□□□ -1.93
CHD1-201ENST00000284049 PSMC2P35998 433 aaKnown RBP2.98□□□□□ -1.93
CHD1-201ENST00000284049 TRIM28Q13263 835 aaKnown RBP2.98□□□□□ -1.93
CHD1-201ENST00000284049 SLC29A2Q14542 456 aa2.98□□□□□ -1.93
CHD1-201ENST00000284049 NAA25Q14CX7 972 aa2.98□□□□□ -1.93
CHD1-201ENST00000284049 BICRALQ6AI39 1079 aa2.98□□□□□ -1.93
CHD1-201ENST00000284049 CNSTQ6PJW8 725 aa2.98□□□□□ -1.93
CHD1-201ENST00000284049 OVCH1Q7RTY7 1134 aa2.98□□□□□ -1.93
CHD1-201ENST00000284049 TICAM1Q8IUC6 712 aa2.98□□□□□ -1.93
CHD1-201ENST00000284049 TTC39CQ8N584 583 aa2.98□□□□□ -1.93
CHD1-201ENST00000284049 SLC15A4Q8N697 577 aa2.98□□□□□ -1.93
CHD1-201ENST00000284049 LINC00116Q8NCU8 138 aa2.98□□□□□ -1.93
CHD1-201ENST00000284049 CPT1CQ8TCG5 803 aa2.98□□□□□ -1.93
CHD1-201ENST00000284049 SSH3Q8TE77 659 aa2.98□□□□□ -1.93
CHD1-201ENST00000284049 GPATCH1Q9BRR8 931 aaKnown RBP2.98□□□□□ -1.93
CHD1-201ENST00000284049 STK33Q9BYT3 514 aa2.98□□□□□ -1.93
CHD1-201ENST00000284049 KLHL4Q9C0H6 718 aa2.98□□□□□ -1.93
CHD1-201ENST00000284049 MMADHCQ9H3L0 296 aaPredicted RBP2.98□□□□□ -1.93
CHD1-201ENST00000284049 MROH8Q9H579 483 aa2.98□□□□□ -1.93
CHD1-201ENST00000284049 EPS8L2Q9H6S3 715 aa2.98□□□□□ -1.93
CHD1-201ENST00000284049 TTC12Q9H892 705 aaPredicted RBP2.98□□□□□ -1.93
CHD1-201ENST00000284049 A1CFQ9NQ94 594 aaKnown RBP2.98□□□□□ -1.93
CHD1-201ENST00000284049 LIMCH1Q9UPQ0 1083 aa2.98□□□□□ -1.93
CHD1-201ENST00000284049 ITM2BQ9Y287 266 aa2.98□□□□□ -1.93
CHD1-201ENST00000284049 SCAF11Q99590 1463 aaKnown RBP2.98□□□□□ -1.93
CHD1-201ENST00000284049 SYNGAP1Q96PV0 1343 aa2.98□□□□□ -1.93
CHD1-201ENST00000284049 MYBBP1AQ9BQG0 1328 aaKnown RBP2.98□□□□□ -1.93
CHD1-201ENST00000284049 MTUS2Q5JR59 1369 aa2.98□□□□□ -1.93
CHD1-201ENST00000284049 SHOXO15266 292 aa2.98□□□□□ -1.93
CHD1-201ENST00000284049 PPP6R2O75170 966 aa2.98□□□□□ -1.93
CHD1-201ENST00000284049 RAP2AP10114 183 aa2.98□□□□□ -1.93
CHD1-201ENST00000284049 SMPD1P17405 629 aa2.98□□□□□ -1.93
CHD1-201ENST00000284049 GSTM5P46439 218 aa2.98□□□□□ -1.93
CHD1-201ENST00000284049 GRIN1Q05586 938 aa2.98□□□□□ -1.93
CHD1-201ENST00000284049 EGR3Q06889 387 aa2.98□□□□□ -1.93
CHD1-201ENST00000284049 KCNB1Q14721 858 aa2.98□□□□□ -1.93
CHD1-201ENST00000284049 TBCEQ15813 527 aaPredicted RBP2.98□□□□□ -1.93
CHD1-201ENST00000284049 CTXN3Q4LDR2 81 aa2.98□□□□□ -1.93
CHD1-201ENST00000284049 BTNL9Q6UXG8 535 aa2.98□□□□□ -1.93
CHD1-201ENST00000284049 ZC3H18Q86VM9 953 aaKnown RBP2.98□□□□□ -1.93
CHD1-201ENST00000284049 LRFN3Q9BTN0 628 aa2.98□□□□□ -1.93
CHD1-201ENST00000284049 SIK2Q9H0K1 926 aa2.98□□□□□ -1.93
CHD1-201ENST00000284049 HCFC1R1Q9NWW0 138 aa2.98□□□□□ -1.93
CHD1-201ENST00000284049 RRP15Q9Y3B9 282 aaKnown RBP2.98□□□□□ -1.93
CHD1-201ENST00000284049 AP1M2Q9Y6Q5 423 aa2.98□□□□□ -1.93
CHD1-201ENST00000284049 NKTRP30414 1462 aaKnown RBP2.98□□□□□ -1.93
CHD1-201ENST00000284049 TOPAZ1Q8N9V7 1692 aa2.97□□□□□ -1.93
CHD1-201ENST00000284049 PRSS38A1L453 326 aa2.97□□□□□ -1.93
CHD1-201ENST00000284049 EIF3CLB5ME19 914 aaKnown RBP2.97□□□□□ -1.93
CHD1-201ENST00000284049 WNT9AO14904 365 aa2.97□□□□□ -1.93
CHD1-201ENST00000284049 LETM1O95202 739 aaPredicted RBP2.97□□□□□ -1.93
CHD1-201ENST00000284049 CASQ1P31415 396 aa2.97□□□□□ -1.93
CHD1-201ENST00000284049 IGHMBP2P38935 993 aaKnown RBP2.97□□□□□ -1.93
CHD1-201ENST00000284049 MLH1P40692 756 aa2.97□□□□□ -1.93
CHD1-201ENST00000284049 MTNR1BP49286 362 aa2.97□□□□□ -1.93
CHD1-201ENST00000284049 EFR3AQ14156 821 aa2.97□□□□□ -1.93
CHD1-201ENST00000284049 DEPDC1Q5TB30 811 aa2.97□□□□□ -1.93
CHD1-201ENST00000284049 RINT1Q6NUQ1 792 aa2.97□□□□□ -1.93
CHD1-201ENST00000284049 IGF2-ASQ6U949 168 aa2.97□□□□□ -1.93
CHD1-201ENST00000284049 B3GNT9Q6UX72 402 aa2.97□□□□□ -1.93
CHD1-201ENST00000284049 CATSPER4Q7RTX7 472 aa2.97□□□□□ -1.93
CHD1-201ENST00000284049 PNPLA5Q7Z6Z6 429 aaPredicted RBP2.97□□□□□ -1.93
CHD1-201ENST00000284049 THNSL1Q8IYQ7 743 aa2.97□□□□□ -1.93
CHD1-201ENST00000284049 PSMA8Q8TAA3 256 aa2.97□□□□□ -1.93
CHD1-201ENST00000284049 FAM71BQ8TC56 605 aa2.97□□□□□ -1.93
CHD1-201ENST00000284049 SPSB4Q96A44 273 aa2.97□□□□□ -1.93
CHD1-201ENST00000284049 C1orf159Q96HA4 380 aa2.97□□□□□ -1.93
CHD1-201ENST00000284049 REXO5Q96IC2 774 aaKnown RBP2.97□□□□□ -1.93
CHD1-201ENST00000284049 TRIM47Q96LD4 638 aa2.97□□□□□ -1.93
CHD1-201ENST00000284049 PCDHGC5Q9Y5F6 944 aa2.97□□□□□ -1.93
CHD1-201ENST00000284049 PTCH1Q13635 1447 aa2.97□□□□□ -1.93
CHD1-201ENST00000284049 NOL3O60936 208 aaKnown RBP2.97□□□□□ -1.93
CHD1-201ENST00000284049 JUPP14923 745 aa2.97□□□□□ -1.93
CHD1-201ENST00000284049 TSHRP16473 764 aa2.97□□□□□ -1.93
Retrieved 100 of 20,778 RNA–protein pairs in 18.6 ms