RNA–Protein interactions for RNA: ENST00000279452.10

CD44-204, Transcript of CD44 molecule (Indian blood group), humanhuman

TSL 3

Gene CD44, Length 862 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD44-204ENST00000279452 LILRA6Q6PI73 481 aa6.99□□□□□ -1.29
CD44-204ENST00000279452 C15orf39Q6ZRI6 1047 aa6.99□□□□□ -1.29
CD44-204ENST00000279452 GRASPQ7Z6J2 395 aaPredicted RBP6.99□□□□□ -1.29
CD44-204ENST00000279452 FRMD5Q7Z6J6 570 aa6.99□□□□□ -1.29
CD44-204ENST00000279452 FILIP1Q7Z7B0 1213 aa6.99□□□□□ -1.29
CD44-204ENST00000279452 GPR149Q86SP6 731 aa6.99□□□□□ -1.29
CD44-204ENST00000279452 OSTM1Q86WC4 334 aa6.99□□□□□ -1.29
CD44-204ENST00000279452 FAM114A1Q8IWE2 563 aa6.99□□□□□ -1.29
CD44-204ENST00000279452 TDRD5Q8NAT2 981 aaKnown RBP6.99□□□□□ -1.29
CD44-204ENST00000279452 ATAD1Q8NBU5 361 aa6.99□□□□□ -1.29
CD44-204ENST00000279452 FBXL13Q8NEE6 735 aa6.99□□□□□ -1.29
CD44-204ENST00000279452 CXorf38Q8TB03 319 aa6.99□□□□□ -1.29
CD44-204ENST00000279452 FEZF2Q8TBJ5 459 aa6.99□□□□□ -1.29
CD44-204ENST00000279452 HDAC7Q8WUI4 952 aa6.99□□□□□ -1.29
CD44-204ENST00000279452 TAF4BQ92750 862 aa6.99□□□□□ -1.29
CD44-204ENST00000279452 BORCS6Q96GS4 357 aa6.99□□□□□ -1.29
CD44-204ENST00000279452 CORO1BQ9BR76 489 aa6.99□□□□□ -1.29
CD44-204ENST00000279452 MED10Q9BTT4 135 aa6.99□□□□□ -1.29
CD44-204ENST00000279452 PHF7Q9BWX1 381 aaPredicted RBP6.99□□□□□ -1.29
CD44-204ENST00000279452 PRKD2Q9BZL6 878 aa6.99□□□□□ -1.29
CD44-204ENST00000279452 DNAI2Q9GZS0 605 aa6.99□□□□□ -1.29
CD44-204ENST00000279452 S1PR5Q9H228 398 aa6.99□□□□□ -1.29
CD44-204ENST00000279452 ANO10Q9NW15 660 aa6.99□□□□□ -1.29
CD44-204ENST00000279452 RAB20Q9NX57 234 aa6.99□□□□□ -1.29
CD44-204ENST00000279452 TMEM63CQ9P1W3 806 aa6.99□□□□□ -1.29
CD44-204ENST00000279452 NR2E1Q9Y466 385 aa6.99□□□□□ -1.29
CD44-204ENST00000279452 PCDHB5Q9Y5E4 795 aa6.99□□□□□ -1.29
CD44-204ENST00000279452 UTP18Q9Y5J1 556 aaKnown RBP eCLIP6.99□□□□□ -1.29
CD44-204ENST00000279452 CLUHO75153 1309 aa6.99□□□□□ -1.29
CD44-204ENST00000279452 PRRC2BQ5JSZ5 2229 aaKnown RBP6.99□□□□□ -1.29
CD44-204ENST00000279452 TBC1D4O60343 1298 aa6.98□□□□□ -1.29
CD44-204ENST00000279452 ATP2C2O75185 946 aa6.98□□□□□ -1.29
CD44-204ENST00000279452 ABLIM3O94929 683 aa6.98□□□□□ -1.29
CD44-204ENST00000279452 STAU1O95793 577 aaKnown RBP6.98□□□□□ -1.29
CD44-204ENST00000279452 ASS1P00966 412 aaKnown RBP6.98□□□□□ -1.29
CD44-204ENST00000279452 AFPP02771 609 aaKnown RBP6.98□□□□□ -1.29
CD44-204ENST00000279452 TPM2P07951 284 aa6.98□□□□□ -1.29
CD44-204ENST00000279452 MYL4P12829 197 aa6.98□□□□□ -1.29
CD44-204ENST00000279452 PRKCSHP14314 528 aaPredicted RBP6.98□□□□□ -1.29
CD44-204ENST00000279452 WARSP23381 471 aaKnown RBP6.98□□□□□ -1.29
CD44-204ENST00000279452 FSHRP23945 695 aa6.98□□□□□ -1.29
CD44-204ENST00000279452 LMO2P25791 158 aa6.98□□□□□ -1.29
CD44-204ENST00000279452 ANXA13P27216 316 aa6.98□□□□□ -1.29
CD44-204ENST00000279452 GNL1P36915 607 aaPredicted RBP6.98□□□□□ -1.29
CD44-204ENST00000279452 FMO5P49326 533 aa6.98□□□□□ -1.29
CD44-204ENST00000279452 NTHL1P78549 312 aa6.98□□□□□ -1.29
CD44-204ENST00000279452 ZP2Q05996 745 aa6.98□□□□□ -1.29
CD44-204ENST00000279452 ENPEPQ07075 957 aa6.98□□□□□ -1.29
CD44-204ENST00000279452 NFE2Q16621 373 aaPredicted RBP6.98□□□□□ -1.29
CD44-204ENST00000279452 CCDC142Q17RM4 750 aa6.98□□□□□ -1.29
CD44-204ENST00000279452 UVSSAQ2YD98 709 aa6.98□□□□□ -1.29
CD44-204ENST00000279452 CBWD6Q4V339 395 aa6.98□□□□□ -1.29
CD44-204ENST00000279452 PABPC1LQ4VXU2 614 aaKnown RBP6.98□□□□□ -1.29
CD44-204ENST00000279452 MDH1BQ5I0G3 518 aa6.98□□□□□ -1.29
CD44-204ENST00000279452 CBWD3Q5JTY5 395 aa6.98□□□□□ -1.29
CD44-204ENST00000279452 CBWD5Q5RIA9 395 aa6.98□□□□□ -1.29
CD44-204ENST00000279452 C4orf50Q6ZRC1 276 aa6.98□□□□□ -1.29
CD44-204ENST00000279452 PDZD4Q76G19 769 aaPredicted RBP6.98□□□□□ -1.29
CD44-204ENST00000279452 SCN4BQ8IWT1 228 aa6.98□□□□□ -1.29
CD44-204ENST00000279452 ADHFE1Q8IWW8 467 aa6.98□□□□□ -1.29
CD44-204ENST00000279452 ZC3H3Q8IXZ2 948 aaKnown RBP6.98□□□□□ -1.29
CD44-204ENST00000279452 TCEAL8Q8IYN2 117 aa6.98□□□□□ -1.29
CD44-204ENST00000279452 TTC9BQ8N6N2 239 aa6.98□□□□□ -1.29
CD44-204ENST00000279452 CMASQ8NFW8 434 aaPredicted RBP6.98□□□□□ -1.29
CD44-204ENST00000279452 SPATA18Q8TC71 538 aa6.98□□□□□ -1.29
CD44-204ENST00000279452 SPPL2BQ8TCT7 592 aa6.98□□□□□ -1.29
CD44-204ENST00000279452 GPR152Q8TDT2 470 aa6.98□□□□□ -1.29
CD44-204ENST00000279452 GIPC2Q8TF65 315 aa6.98□□□□□ -1.29
CD44-204ENST00000279452 C2orf15Q8WU43 125 aaKnown RBP6.98□□□□□ -1.29
CD44-204ENST00000279452 KBTBD7Q8WVZ9 684 aa6.98□□□□□ -1.29
CD44-204ENST00000279452 ING5Q8WYH8 240 aa6.98□□□□□ -1.29
CD44-204ENST00000279452 SUSD6Q92537 303 aa6.98□□□□□ -1.29
CD44-204ENST00000279452 SLC35C1Q96A29 364 aa6.98□□□□□ -1.29
CD44-204ENST00000279452 MYLPFQ96A32 169 aa6.98□□□□□ -1.29
CD44-204ENST00000279452 ZNF707Q96C28 371 aaPredicted RBP6.98□□□□□ -1.29
CD44-204ENST00000279452 ACSF2Q96CM8 615 aaPredicted RBP6.98□□□□□ -1.29
CD44-204ENST00000279452 ZNF512Q96ME7 567 aaPredicted RBP6.98□□□□□ -1.29
CD44-204ENST00000279452 RTP3Q9BQQ7 232 aa6.98□□□□□ -1.29
CD44-204ENST00000279452 ACBD6Q9BR61 282 aa6.98□□□□□ -1.29
CD44-204ENST00000279452 COL25A1Q9BXS0 654 aaPredicted RBP6.98□□□□□ -1.29
CD44-204ENST00000279452 RHOBTB2Q9BYZ6 727 aa6.98□□□□□ -1.29
CD44-204ENST00000279452 NIF3L1Q9GZT8 377 aa6.98□□□□□ -1.29
CD44-204ENST00000279452 XYLT2Q9H1B5 865 aa6.98□□□□□ -1.29
CD44-204ENST00000279452 DNAJC25Q9H1X3 360 aa6.98□□□□□ -1.29
CD44-204ENST00000279452 DPEP3Q9H4B8 488 aa6.98□□□□□ -1.29
CD44-204ENST00000279452 ASAH2Q9NR71 780 aa6.98□□□□□ -1.29
CD44-204ENST00000279452 HCFC1R1Q9NWW0 138 aa6.98□□□□□ -1.29
CD44-204ENST00000279452 PRKAG3Q9UGI9 489 aa6.98□□□□□ -1.29
CD44-204ENST00000279452 GTF3C4Q9UKN8 822 aa6.98□□□□□ -1.29
CD44-204ENST00000279452 CDH9Q9ULB4 789 aa6.98□□□□□ -1.29
CD44-204ENST00000279452 MAGED2Q9UNF1 606 aaPredicted RBP6.98□□□□□ -1.29
CD44-204ENST00000279452 ANK1P16157 1881 aa6.98□□□□□ -1.29
CD44-204ENST00000279452 PLXNA3P51805 1871 aa6.98□□□□□ -1.29
CD44-204ENST00000279452 ATP8B3O60423 1300 aa6.98□□□□□ -1.29
CD44-204ENST00000279452 TSC2P49815 1807 aa6.97□□□□□ -1.29
CD44-204ENST00000279452 SYCE3A1L190 88 aa6.97□□□□□ -1.29
CD44-204ENST00000279452 MYBPHLA2RUH7 354 aa6.97□□□□□ -1.29
CD44-204ENST00000279452 C2CD4DB7Z1M9 353 aa6.97□□□□□ -1.29
CD44-204ENST00000279452 DLL1O00548 723 aa6.97□□□□□ -1.29
CD44-204ENST00000279452 LRRN2O75325 713 aa6.97□□□□□ -1.29
Retrieved 100 of 20,778 RNA–protein pairs in 24.5 ms