RNA–Protein interactions for RNA: ENST00000279027.8

SLC13A3-201, Transcript of solute carrier family 13 member 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SLC13A3, Length 4,017 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLC13A3-201ENST00000279027 ATP2A2P16615 1042 aaKnown RBP12.5□□□□□ -0.41
SLC13A3-201ENST00000279027 NRLP54845 237 aa12.5□□□□□ -0.41
SLC13A3-201ENST00000279027 EIF3EP60228 445 aaKnown RBP12.5□□□□□ -0.41
SLC13A3-201ENST00000279027 AUHQ13825 339 aaKnown RBP12.5□□□□□ -0.41
SLC13A3-201ENST00000279027 SETDB1Q15047 1291 aa12.5□□□□□ -0.41
SLC13A3-201ENST00000279027 ZNF677Q86XU0 584 aa12.5□□□□□ -0.41
SLC13A3-201ENST00000279027 BRSK2Q8IWQ3 736 aa12.5□□□□□ -0.41
SLC13A3-201ENST00000279027 RCOR2Q8IZ40 523 aa12.5□□□□□ -0.41
SLC13A3-201ENST00000279027 NETO2Q8NC67 525 aa12.5□□□□□ -0.41
SLC13A3-201ENST00000279027 LRRC8CQ8TDW0 803 aa12.5□□□□□ -0.41
SLC13A3-201ENST00000279027 OPTNQ96CV9 577 aa12.5□□□□□ -0.41
SLC13A3-201ENST00000279027 HAPLN2Q9GZV7 340 aa12.5□□□□□ -0.41
SLC13A3-201ENST00000279027 ST6GALNAC4Q9H4F1 302 aa12.5□□□□□ -0.41
SLC13A3-201ENST00000279027 SMARCAD1Q9H4L7 1026 aa12.5□□□□□ -0.41
SLC13A3-201ENST00000279027 NINJ2Q9NZG7 142 aa12.5□□□□□ -0.41
SLC13A3-201ENST00000279027 CHMP2BQ9UQN3 213 aa12.5□□□□□ -0.41
SLC13A3-201ENST00000279027 MYPNQ86TC9 1320 aa12.5□□□□□ -0.41
SLC13A3-201ENST00000279027 SHOX2O60902 331 aaPredicted RBP12.5□□□□□ -0.41
SLC13A3-201ENST00000279027 ZC3H11AO75152 810 aaKnown RBP eCLIP12.5□□□□□ -0.41
SLC13A3-201ENST00000279027 RPS6KA5O75582 802 aa12.5□□□□□ -0.41
SLC13A3-201ENST00000279027 GPR162Q16538 588 aa12.5□□□□□ -0.41
SLC13A3-201ENST00000279027 FAM47CQ5HY64 1035 aa12.5□□□□□ -0.41
SLC13A3-201ENST00000279027 TRMT10CQ7L0Y3 403 aaKnown RBP12.5□□□□□ -0.41
SLC13A3-201ENST00000279027 SPATS2Q86XZ4 545 aaKnown RBP12.5□□□□□ -0.41
SLC13A3-201ENST00000279027 DNERQ8NFT8 737 aa12.5□□□□□ -0.41
SLC13A3-201ENST00000279027 THSD7AQ9UPZ6 1657 aa12.5□□□□□ -0.41
SLC13A3-201ENST00000279027 TRAPPC3O43617 180 aa12.49□□□□□ -0.41
SLC13A3-201ENST00000279027 TTC4O95801 387 aa12.49□□□□□ -0.41
SLC13A3-201ENST00000279027 RPSAP08865 295 aaKnown RBP12.49□□□□□ -0.41
SLC13A3-201ENST00000279027 ERFP50548 548 aa12.49□□□□□ -0.41
SLC13A3-201ENST00000279027 IL9RQ01113 521 aa12.49□□□□□ -0.41
SLC13A3-201ENST00000279027 DNAJC3Q13217 504 aa12.49□□□□□ -0.41
SLC13A3-201ENST00000279027 SPOCD1Q6ZMY3 1216 aa12.49□□□□□ -0.41
SLC13A3-201ENST00000279027 JOSD2Q8TAC2 188 aa12.49□□□□□ -0.41
SLC13A3-201ENST00000279027 TFAP2BQ92481 460 aa12.49□□□□□ -0.41
SLC13A3-201ENST00000279027 FAF2Q96CS3 445 aa12.49□□□□□ -0.41
SLC13A3-201ENST00000279027 HPDLQ96IR7 371 aa12.49□□□□□ -0.41
SLC13A3-201ENST00000279027 PLCD4Q9BRC7 762 aa12.49□□□□□ -0.41
SLC13A3-201ENST00000279027 C2orf40Q9H1Z8 148 aa12.49□□□□□ -0.41
SLC13A3-201ENST00000279027 DHX33Q9H6R0 707 aaKnown RBP12.49□□□□□ -0.41
SLC13A3-201ENST00000279027 ZDHHC18Q9NUE0 388 aa12.49□□□□□ -0.41
SLC13A3-201ENST00000279027 NAALADL1Q9UQQ1 740 aa12.49□□□□□ -0.41
SLC13A3-201ENST00000279027 PDE4DIPQ5VU43 2346 aa12.49□□□□□ -0.41
SLC13A3-201ENST00000279027 LACTBL1A8MY62 500 aa12.49□□□□□ -0.41
SLC13A3-201ENST00000279027 DYNC1LI2O43237 492 aaPredicted RBP12.49□□□□□ -0.41
SLC13A3-201ENST00000279027 RBP3P10745 1247 aa12.49□□□□□ -0.41
SLC13A3-201ENST00000279027 LCP1P13796 627 aa12.49□□□□□ -0.41
SLC13A3-201ENST00000279027 PECAM1P16284 738 aaPredicted RBP12.49□□□□□ -0.41
SLC13A3-201ENST00000279027 MSH2P43246 934 aa12.49□□□□□ -0.41
SLC13A3-201ENST00000279027 OAZ1P54368 228 aa12.49□□□□□ -0.41
SLC13A3-201ENST00000279027 MPZL3Q6UWV2 235 aa12.49□□□□□ -0.41
SLC13A3-201ENST00000279027 ARHGEF18Q6ZSZ5 1173 aa12.49□□□□□ -0.41
SLC13A3-201ENST00000279027 ACOT1Q86TX2 421 aa12.49□□□□□ -0.41
SLC13A3-201ENST00000279027 GLIS1Q8NBF1 620 aa12.49□□□□□ -0.41
SLC13A3-201ENST00000279027 GIMAP7Q8NHV1 300 aa12.49□□□□□ -0.41
SLC13A3-201ENST00000279027 KLHL29Q96CT2 875 aa12.49□□□□□ -0.41
SLC13A3-201ENST00000279027 NTPCRQ9BSD7 190 aaKnown RBP12.49□□□□□ -0.41
SLC13A3-201ENST00000279027 GH1P01241 217 aa12.49□□□□□ -0.41
SLC13A3-201ENST00000279027 ARMC9Q7Z3E5 817 aa12.49□□□□□ -0.41
SLC13A3-201ENST00000279027 NME8Q8N427 588 aa12.49□□□□□ -0.41
SLC13A3-201ENST00000279027 SPATA18Q8TC71 538 aa12.49□□□□□ -0.41
SLC13A3-201ENST00000279027 RNPEPQ9H4A4 650 aa12.49□□□□□ -0.41
SLC13A3-201ENST00000279027 KIF9Q9HAQ2 790 aa12.49□□□□□ -0.41
SLC13A3-201ENST00000279027 SLTMQ9NWH9 1034 aaKnown RBP eCLIP12.49□□□□□ -0.41
SLC13A3-201ENST00000279027 COQ4Q9Y3A0 265 aa12.49□□□□□ -0.41
SLC13A3-201ENST00000279027 MRPL42Q9Y6G3 142 aaKnown RBP12.49□□□□□ -0.41
SLC13A3-201ENST00000279027 H0YGN5 161 aa12.48□□□□□ -0.41
SLC13A3-201ENST00000279027 FSCN2O14926 492 aa12.48□□□□□ -0.41
SLC13A3-201ENST00000279027 MAPK13O15264 365 aa12.48□□□□□ -0.41
SLC13A3-201ENST00000279027 EDN1P05305 212 aa12.48□□□□□ -0.41
SLC13A3-201ENST00000279027 UNGP13051 313 aaPredicted RBP12.48□□□□□ -0.41
SLC13A3-201ENST00000279027 SSTR1P30872 391 aa12.48□□□□□ -0.41
SLC13A3-201ENST00000279027 ABCD1P33897 745 aa12.48□□□□□ -0.41
SLC13A3-201ENST00000279027 SURF1Q15526 300 aa12.48□□□□□ -0.41
SLC13A3-201ENST00000279027 JADE1Q6IE81 842 aa12.48□□□□□ -0.41
SLC13A3-201ENST00000279027 LBX2Q6XYB7 198 aa12.48□□□□□ -0.41
SLC13A3-201ENST00000279027 PDIK1LQ8N165 341 aa12.48□□□□□ -0.41
SLC13A3-201ENST00000279027 DDX1Q92499 740 aaKnown RBP12.48□□□□□ -0.41
SLC13A3-201ENST00000279027 TTC17Q96AE7 1141 aa12.48□□□□□ -0.41
SLC13A3-201ENST00000279027 FAM129AQ9BZQ8 928 aa12.48□□□□□ -0.41
SLC13A3-201ENST00000279027 TRABDQ9H4I3 376 aa12.48□□□□□ -0.41
SLC13A3-201ENST00000279027 TPX2Q9ULW0 747 aaKnown RBP12.48□□□□□ -0.41
SLC13A3-201ENST00000279027 NFS1Q9Y697 457 aa12.48□□□□□ -0.41
SLC13A3-201ENST00000279027 NPTXRO95502 500 aa12.48□□□□□ -0.41
SLC13A3-201ENST00000279027 HNRNPH1P31943 449 aaKnown RBP12.48□□□□□ -0.41
SLC13A3-201ENST00000279027 ADCYAP1R1P41586 468 aa12.48□□□□□ -0.41
SLC13A3-201ENST00000279027 HIF1AQ16665 826 aa12.48□□□□□ -0.41
SLC13A3-201ENST00000279027 CRELD2Q6UXH1 353 aaPredicted RBP12.48□□□□□ -0.41
SLC13A3-201ENST00000279027 EXOC3L1Q86VI1 746 aa12.48□□□□□ -0.41
SLC13A3-201ENST00000279027 ANKRD13AQ8IZ07 590 aa12.48□□□□□ -0.41
SLC13A3-201ENST00000279027 C12orf29Q8N999 325 aa12.48□□□□□ -0.41
SLC13A3-201ENST00000279027 CCNYQ8ND76 341 aa12.48□□□□□ -0.41
SLC13A3-201ENST00000279027 SYT11Q9BT88 431 aa12.48□□□□□ -0.41
SLC13A3-201ENST00000279027 MED10Q9BTT4 135 aa12.48□□□□□ -0.41
SLC13A3-201ENST00000279027 TXNRD2Q9NNW7 524 aa12.48□□□□□ -0.41
SLC13A3-201ENST00000279027 STAU2Q9NUL3 570 aaKnown RBP eCLIP12.48□□□□□ -0.41
SLC13A3-201ENST00000279027 SNCAIPQ9Y6H5 919 aa12.48□□□□□ -0.41
SLC13A3-201ENST00000279027 TMEM132DQ14C87 1099 aa12.48□□□□□ -0.41
SLC13A3-201ENST00000279027 FASTKD3Q14CZ7 662 aaKnown RBP12.48□□□□□ -0.41
SLC13A3-201ENST00000279027 C15orf59Q2T9L4 293 aaPredicted RBP12.48□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 42.7 ms