RNA–Protein interactions for RNA: ENST00000276573.11

TRIM55-201, Transcript of tripartite motif containing 55, humanhuman

TSL 1 (best) BASIC

Gene TRIM55, Length 1,960 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM55-201ENST00000276573 C12orf50Q8NA57 414 aaPredicted RBP10.15□□□□□ -0.78
TRIM55-201ENST00000276573 C3orf20Q8ND61 904 aa10.15□□□□□ -0.78
TRIM55-201ENST00000276573 BEST2Q8NFU1 509 aa10.15□□□□□ -0.78
TRIM55-201ENST00000276573 C18orf8Q96DM3 657 aa10.15□□□□□ -0.78
TRIM55-201ENST00000276573 RUNDC3BQ96NL0 473 aa10.15□□□□□ -0.78
TRIM55-201ENST00000276573 DPH5Q9H2P9 285 aa10.15□□□□□ -0.78
TRIM55-201ENST00000276573 PRDM10Q9NQV6 1147 aa10.15□□□□□ -0.78
TRIM55-201ENST00000276573 STRIP2Q9ULQ0 834 aa10.15□□□□□ -0.78
TRIM55-201ENST00000276573 GABRQQ9UN88 632 aa10.15□□□□□ -0.78
TRIM55-201ENST00000276573 FAN1Q9Y2M0 1017 aa10.15□□□□□ -0.78
TRIM55-201ENST00000276573 MYADML2A6NDP7 307 aa10.15□□□□□ -0.78
TRIM55-201ENST00000276573 SIGLEC16A6NMB1 481 aa10.15□□□□□ -0.78
TRIM55-201ENST00000276573 O00370 1275 aa10.15□□□□□ -0.78
TRIM55-201ENST00000276573 PODXLO00592 558 aa10.15□□□□□ -0.78
TRIM55-201ENST00000276573 HSF2BPO75031 334 aa10.15□□□□□ -0.78
TRIM55-201ENST00000276573 RECQL4O94761 1208 aa10.15□□□□□ -0.78
TRIM55-201ENST00000276573 C6orf222P0C671 652 aaPredicted RBP10.15□□□□□ -0.78
TRIM55-201ENST00000276573 CYBAP13498 195 aa10.15□□□□□ -0.78
TRIM55-201ENST00000276573 SSR1P43307 286 aaKnown RBP10.15□□□□□ -0.78
TRIM55-201ENST00000276573 FNTAP49354 379 aa10.15□□□□□ -0.78
TRIM55-201ENST00000276573 NDST1P52848 882 aa10.15□□□□□ -0.78
TRIM55-201ENST00000276573 GYS2P54840 703 aa10.15□□□□□ -0.78
TRIM55-201ENST00000276573 FCGRTP55899 365 aa10.15□□□□□ -0.78
TRIM55-201ENST00000276573 OGDHQ02218 1023 aa10.15□□□□□ -0.78
TRIM55-201ENST00000276573 ZNF252P-AS1Q0IIN9 211 aa10.15□□□□□ -0.78
TRIM55-201ENST00000276573 PIGHQ14442 188 aaPredicted RBP10.15□□□□□ -0.78
TRIM55-201ENST00000276573 ZNF268Q14587 947 aaPredicted RBP10.15□□□□□ -0.78
TRIM55-201ENST00000276573 LLGL1Q15334 1064 aa10.15□□□□□ -0.78
TRIM55-201ENST00000276573 KCTD19Q17RG1 926 aaPredicted RBP10.15□□□□□ -0.78
TRIM55-201ENST00000276573 GLIPR1L2Q4G1C9 344 aa10.15□□□□□ -0.78
TRIM55-201ENST00000276573 PTPN20Q4JDL3 420 aa10.15□□□□□ -0.78
TRIM55-201ENST00000276573 SGO2Q562F6 1265 aa10.15□□□□□ -0.78
TRIM55-201ENST00000276573 GNASQ5JWF2 1037 aa10.15□□□□□ -0.78
TRIM55-201ENST00000276573 UBXN11Q5T124 520 aa10.15□□□□□ -0.78
TRIM55-201ENST00000276573 CFAP58Q5T655 872 aa10.15□□□□□ -0.78
TRIM55-201ENST00000276573 MFSD14CQ5VZR4 134 aa10.15□□□□□ -0.78
TRIM55-201ENST00000276573 EXD1Q8NHP7 514 aa10.15□□□□□ -0.78
TRIM55-201ENST00000276573 RIN2Q8WYP3 895 aaPredicted RBP10.15□□□□□ -0.78
TRIM55-201ENST00000276573 PIK3R5Q8WYR1 880 aa10.15□□□□□ -0.78
TRIM55-201ENST00000276573 C18orf25Q96B23 403 aaPredicted RBP10.15□□□□□ -0.78
TRIM55-201ENST00000276573 MCEEQ96PE7 176 aa10.15□□□□□ -0.78
TRIM55-201ENST00000276573 SH3GL2Q99962 352 aa10.15□□□□□ -0.78
TRIM55-201ENST00000276573 HERPUD2Q9BSE4 406 aa10.15□□□□□ -0.78
TRIM55-201ENST00000276573 MTG1Q9BT17 334 aaPredicted RBP10.15□□□□□ -0.78
TRIM55-201ENST00000276573 TRIM6Q9C030 488 aaPredicted RBP10.15□□□□□ -0.78
TRIM55-201ENST00000276573 ARHGAP39Q9C0H5 1083 aa10.15□□□□□ -0.78
TRIM55-201ENST00000276573 NXF3Q9H4D5 531 aaKnown RBP10.15□□□□□ -0.78
TRIM55-201ENST00000276573 CNTN3Q9P232 1028 aa10.15□□□□□ -0.78
TRIM55-201ENST00000276573 VPS18Q9P253 973 aa10.15□□□□□ -0.78
TRIM55-201ENST00000276573 WDR35Q9P2L0 1181 aa10.15□□□□□ -0.78
TRIM55-201ENST00000276573 RASAL2Q9UJF2 1139 aa10.15□□□□□ -0.78
TRIM55-201ENST00000276573 ADAM21Q9UKJ8 722 aa10.15□□□□□ -0.78
TRIM55-201ENST00000276573 ABT1Q9ULW3 272 aaKnown RBP10.15□□□□□ -0.78
TRIM55-201ENST00000276573 WDR3Q9UNX4 943 aaKnown RBP eCLIP10.15□□□□□ -0.78
TRIM55-201ENST00000276573 PIN4Q9Y237 131 aaKnown RBP10.15□□□□□ -0.78
TRIM55-201ENST00000276573 F8VP50 259 aa10.14□□□□□ -0.79
TRIM55-201ENST00000276573 PPEF2O14830 753 aa10.14□□□□□ -0.79
TRIM55-201ENST00000276573 OPA1O60313 960 aa10.14□□□□□ -0.79
TRIM55-201ENST00000276573 HMGCRP04035 888 aa10.14□□□□□ -0.79
TRIM55-201ENST00000276573 AKAP5P24588 427 aa10.14□□□□□ -0.79
TRIM55-201ENST00000276573 GPD2P43304 727 aa10.14□□□□□ -0.79
TRIM55-201ENST00000276573 GABRB2P47870 512 aa10.14□□□□□ -0.79
TRIM55-201ENST00000276573 KCNJ1P48048 391 aa10.14□□□□□ -0.79
TRIM55-201ENST00000276573 XKR4Q5GH76 650 aa10.14□□□□□ -0.79
TRIM55-201ENST00000276573 LRRC38Q5VT99 294 aa10.14□□□□□ -0.79
TRIM55-201ENST00000276573 CCDC105Q8IYK2 499 aa10.14□□□□□ -0.79
TRIM55-201ENST00000276573 RCOR2Q8IZ40 523 aa10.14□□□□□ -0.79
TRIM55-201ENST00000276573 LRRC52Q8N7C0 313 aa10.14□□□□□ -0.79
TRIM55-201ENST00000276573 HHIPL1Q96JK4 782 aa10.14□□□□□ -0.79
TRIM55-201ENST00000276573 ZIM3Q96PE6 472 aa10.14□□□□□ -0.79
TRIM55-201ENST00000276573 TSPAN18Q96SJ8 248 aa10.14□□□□□ -0.79
TRIM55-201ENST00000276573 NT5C1AQ9BXI3 368 aa10.14□□□□□ -0.79
TRIM55-201ENST00000276573 TRIM31Q9BZY9 425 aa10.14□□□□□ -0.79
TRIM55-201ENST00000276573 UPF3AQ9H1J1 476 aaKnown RBP10.14□□□□□ -0.79
TRIM55-201ENST00000276573 RNF39Q9H2S5 420 aa10.14□□□□□ -0.79
TRIM55-201ENST00000276573 TJP2Q9UDY2 1190 aa10.14□□□□□ -0.79
TRIM55-201ENST00000276573 TUBGCP4Q9UGJ1 667 aa10.14□□□□□ -0.79
TRIM55-201ENST00000276573 CITO14578 2027 aa10.14□□□□□ -0.79
TRIM55-201ENST00000276573 SMIM28A0A1B0GU29 152 aa10.14□□□□□ -0.79
TRIM55-201ENST00000276573 DCAF8L1A6NGE4 600 aa10.14□□□□□ -0.79
TRIM55-201ENST00000276573 GOLGA8SH3BPF8 625 aa10.14□□□□□ -0.79
TRIM55-201ENST00000276573 RNF40O75150 1001 aa10.14□□□□□ -0.79
TRIM55-201ENST00000276573 KRT3P12035 628 aa10.14□□□□□ -0.79
TRIM55-201ENST00000276573 RFC1P35251 1148 aaPredicted RBP10.14□□□□□ -0.79
TRIM55-201ENST00000276573 FLT3P36888 993 aa10.14□□□□□ -0.79
TRIM55-201ENST00000276573 FLT3LGP49771 235 aa10.14□□□□□ -0.79
TRIM55-201ENST00000276573 GSCP56915 257 aaPredicted RBP10.14□□□□□ -0.79
TRIM55-201ENST00000276573 PSMC1P62191 440 aaKnown RBP10.14□□□□□ -0.79
TRIM55-201ENST00000276573 ATP13A4Q4VNC1 1196 aa10.14□□□□□ -0.79
TRIM55-201ENST00000276573 C9orf57Q5W0N0 161 aa10.14□□□□□ -0.79
TRIM55-201ENST00000276573 TAF2Q6P1X5 1199 aa10.14□□□□□ -0.79
TRIM55-201ENST00000276573 LCLAT1Q6UWP7 414 aa10.14□□□□□ -0.79
TRIM55-201ENST00000276573 XYLT1Q86Y38 959 aa10.14□□□□□ -0.79
TRIM55-201ENST00000276573 NIPA2Q8N8Q9 360 aa10.14□□□□□ -0.79
TRIM55-201ENST00000276573 C1orf54Q8WWF1 131 aa10.14□□□□□ -0.79
TRIM55-201ENST00000276573 TRIB2Q92519 343 aa10.14□□□□□ -0.79
TRIM55-201ENST00000276573 LRRC45Q96CN5 670 aa10.14□□□□□ -0.79
TRIM55-201ENST00000276573 CPXM1Q96SM3 734 aa10.14□□□□□ -0.79
TRIM55-201ENST00000276573 MRPL45Q9BRJ2 306 aaKnown RBP10.14□□□□□ -0.79
TRIM55-201ENST00000276573 APOL6Q9BWW8 343 aa10.14□□□□□ -0.79
Retrieved 100 of 20,778 RNA–protein pairs in 34.6 ms