RNA–Protein interactions for RNA: ENST00000274254.9

SKP2-201, Transcript of S-phase kinase associated protein 2, humanhuman

TSL 1 (best) BASIC

Gene SKP2, Length 1,537 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SKP2-201ENST00000274254 ZNF397Q8NF99 534 aaPredicted RBP18.35■□□□□ 0.53
SKP2-201ENST00000274254 OR10T2Q8NGX3 314 aa18.35■□□□□ 0.53
SKP2-201ENST00000274254 POF1BQ8WVV4 589 aa18.35■□□□□ 0.53
SKP2-201ENST00000274254 RIN2Q8WYP3 895 aaPredicted RBP18.35■□□□□ 0.53
SKP2-201ENST00000274254 ANP32BQ92688 251 aaKnown RBP18.35■□□□□ 0.53
SKP2-201ENST00000274254 ACBD6Q9BR61 282 aa18.35■□□□□ 0.53
SKP2-201ENST00000274254 NUCKS1Q9H1E3 243 aaKnown RBP18.35■□□□□ 0.53
SKP2-201ENST00000274254 CERS4Q9HA82 394 aa18.35■□□□□ 0.53
SKP2-201ENST00000274254 H7C4K7 107 aa18.34■□□□□ 0.53
SKP2-201ENST00000274254 TPM1P09493 284 aa18.34■□□□□ 0.53
SKP2-201ENST00000274254 PDGFRBP09619 1106 aa18.34■□□□□ 0.53
SKP2-201ENST00000274254 KRT5P13647 590 aa18.34■□□□□ 0.53
SKP2-201ENST00000274254 PCSK1P29120 753 aa18.34■□□□□ 0.53
SKP2-201ENST00000274254 KRT9P35527 623 aa18.34■□□□□ 0.53
SKP2-201ENST00000274254 GPM6BQ13491 265 aa18.34■□□□□ 0.53
SKP2-201ENST00000274254 ZNF394Q53GI3 561 aa18.34■□□□□ 0.53
SKP2-201ENST00000274254 ZNF280DQ6N043 979 aa18.34■□□□□ 0.53
SKP2-201ENST00000274254 PRSS55Q6UWB4 352 aaPredicted RBP18.34■□□□□ 0.53
SKP2-201ENST00000274254 SLC4A11Q8NBS3 891 aa18.34■□□□□ 0.53
SKP2-201ENST00000274254 SPC24Q8NBT2 197 aa18.34■□□□□ 0.53
SKP2-201ENST00000274254 ARNTL2Q8WYA1 636 aa18.34■□□□□ 0.53
SKP2-201ENST00000274254 SYN2Q92777 582 aaPredicted RBP18.34■□□□□ 0.53
SKP2-201ENST00000274254 TMEM176AQ96HP8 235 aa18.34■□□□□ 0.53
SKP2-201ENST00000274254 OXCT2Q9BYC2 517 aaPredicted RBP18.34■□□□□ 0.53
SKP2-201ENST00000274254 TLR9Q9NR96 1032 aa18.34■□□□□ 0.53
SKP2-201ENST00000274254 AIPL1Q9NZN9 384 aa18.34■□□□□ 0.53
SKP2-201ENST00000274254 MTRRQ9UBK8 725 aa18.34■□□□□ 0.53
SKP2-201ENST00000274254 CDH9Q9ULB4 789 aa18.34■□□□□ 0.53
SKP2-201ENST00000274254 BACE2Q9Y5Z0 518 aa18.34■□□□□ 0.53
SKP2-201ENST00000274254 MYO7AQ13402 2215 aa18.34■□□□□ 0.53
SKP2-201ENST00000274254 EPOPA6NHQ4 379 aa18.33■□□□□ 0.53
SKP2-201ENST00000274254 OR6C75A6NL08 312 aa18.33■□□□□ 0.53
SKP2-201ENST00000274254 CYP26A1O43174 497 aa18.33■□□□□ 0.53
SKP2-201ENST00000274254 PAEPP09466 180 aa18.33■□□□□ 0.53
SKP2-201ENST00000274254 ACAT1P24752 427 aaKnown RBP18.33■□□□□ 0.53
SKP2-201ENST00000274254 CLCN1P35523 988 aa18.33■□□□□ 0.53
SKP2-201ENST00000274254 USP8P40818 1118 aa18.33■□□□□ 0.53
SKP2-201ENST00000274254 ERVFC1P60507 584 aa18.33■□□□□ 0.53
SKP2-201ENST00000274254 PTPN14Q15678 1187 aa18.33■□□□□ 0.53
SKP2-201ENST00000274254 PSMD5Q16401 504 aa18.33■□□□□ 0.53
SKP2-201ENST00000274254 CTXN3Q4LDR2 81 aa18.33■□□□□ 0.53
SKP2-201ENST00000274254 E4F1Q66K89 784 aaPredicted RBP18.33■□□□□ 0.53
SKP2-201ENST00000274254 CNGA4Q8IV77 575 aa18.33■□□□□ 0.53
SKP2-201ENST00000274254 FMNL3Q8IVF7 1028 aa18.33■□□□□ 0.53
SKP2-201ENST00000274254 B3GALNT2Q8NCR0 500 aa18.33■□□□□ 0.53
SKP2-201ENST00000274254 PDLIM2Q96JY6 352 aa18.33■□□□□ 0.53
SKP2-201ENST00000274254 TNIP3Q96KP6 325 aa18.33■□□□□ 0.53
SKP2-201ENST00000274254 DNAJC7Q99615 494 aa18.33■□□□□ 0.53
SKP2-201ENST00000274254 PKMYT1Q99640 499 aa18.33■□□□□ 0.53
SKP2-201ENST00000274254 SYT15Q9BQS2 421 aa18.33■□□□□ 0.53
SKP2-201ENST00000274254 DPEP3Q9H4B8 488 aa18.33■□□□□ 0.53
SKP2-201ENST00000274254 MRPL17Q9NRX2 175 aaKnown RBP18.33■□□□□ 0.53
SKP2-201ENST00000274254 SSX2IPQ9Y2D8 614 aa18.33■□□□□ 0.53
SKP2-201ENST00000274254 IRAK3Q9Y616 596 aa18.33■□□□□ 0.53
SKP2-201ENST00000274254 TMEM265A0A087WTH1 108 aa18.33■□□□□ 0.52
SKP2-201ENST00000274254 AKR1B15C9JRZ8 316 aaPredicted RBP18.33■□□□□ 0.52
SKP2-201ENST00000274254 C2CD2LO14523 706 aa18.33■□□□□ 0.52
SKP2-201ENST00000274254 FSCN2O14926 492 aa18.33■□□□□ 0.52
SKP2-201ENST00000274254 GFPT2O94808 682 aa18.33■□□□□ 0.52
SKP2-201ENST00000274254 HNRNPH3P31942 346 aaKnown RBP18.33■□□□□ 0.52
SKP2-201ENST00000274254 ADKP55263 362 aaKnown RBP18.33■□□□□ 0.52
SKP2-201ENST00000274254 ORC1Q13415 861 aa18.33■□□□□ 0.52
SKP2-201ENST00000274254 INTS6LQ5JSJ4 861 aaKnown RBP18.33■□□□□ 0.52
SKP2-201ENST00000274254 SLC8B1Q6J4K2 584 aa18.33■□□□□ 0.52
SKP2-201ENST00000274254 RSPO2Q6UXX9 243 aaPredicted RBP18.33■□□□□ 0.52
SKP2-201ENST00000274254 IRF2BP2Q7Z5L9 587 aa18.33■□□□□ 0.52
SKP2-201ENST00000274254 ACOT1Q86TX2 421 aa18.33■□□□□ 0.52
SKP2-201ENST00000274254 TC2NQ8N9U0 490 aa18.33■□□□□ 0.52
SKP2-201ENST00000274254 OR8K1Q8NGG5 319 aa18.33■□□□□ 0.52
SKP2-201ENST00000274254 TMEM209Q96SK2 561 aa18.33■□□□□ 0.52
SKP2-201ENST00000274254 TCF25Q9BQ70 676 aa18.33■□□□□ 0.52
SKP2-201ENST00000274254 ZNF576Q9H609 170 aa18.33■□□□□ 0.52
SKP2-201ENST00000274254 CDH23Q9H251 3354 aa18.32■□□□□ 0.52
SKP2-201ENST00000274254 ATP2C2O75185 946 aa18.32■□□□□ 0.52
SKP2-201ENST00000274254 PTPN1P18031 435 aaKnown RBP18.32■□□□□ 0.52
SKP2-201ENST00000274254 PSMC1P62191 440 aaKnown RBP18.32■□□□□ 0.52
SKP2-201ENST00000274254 GOLGA8FQ08AF8 430 aa18.32■□□□□ 0.52
SKP2-201ENST00000274254 GOLGA8DPQ0D2H9 430 aa18.32■□□□□ 0.52
SKP2-201ENST00000274254 SFMBT2Q5VUG0 894 aa18.32■□□□□ 0.52
SKP2-201ENST00000274254 FAM171BQ6P995 826 aa18.32■□□□□ 0.52
SKP2-201ENST00000274254 TMC7Q7Z402 723 aa18.32■□□□□ 0.52
SKP2-201ENST00000274254 SLC47A2Q86VL8 602 aa18.32■□□□□ 0.52
SKP2-201ENST00000274254 AUTS2Q8WXX7 1259 aa18.32■□□□□ 0.52
SKP2-201ENST00000274254 CLSTN3Q9BQT9 956 aa18.32■□□□□ 0.52
SKP2-201ENST00000274254 ZCWPW1Q9H0M4 648 aa18.32■□□□□ 0.52
SKP2-201ENST00000274254 LMAN2LQ9H0V9 348 aa18.32■□□□□ 0.52
SKP2-201ENST00000274254 RXFP1Q9HBX9 757 aa18.32■□□□□ 0.52
SKP2-201ENST00000274254 NGRNQ9NPE2 291 aaKnown RBP18.32■□□□□ 0.52
SKP2-201ENST00000274254 ACP6Q9NPH0 428 aa18.32■□□□□ 0.52
SKP2-201ENST00000274254 CRTAC1Q9NQ79 661 aa18.32■□□□□ 0.52
SKP2-201ENST00000274254 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP18.32■□□□□ 0.52
SKP2-201ENST00000274254 ABHD10Q9NUJ1 306 aa18.32■□□□□ 0.52
SKP2-201ENST00000274254 FNIP2Q9P278 1114 aa18.32■□□□□ 0.52
SKP2-201ENST00000274254 FERP16591 822 aa18.31■□□□□ 0.52
SKP2-201ENST00000274254 BPIFB4P59827 614 aa18.31■□□□□ 0.52
SKP2-201ENST00000274254 TSPY1Q01534 308 aa18.31■□□□□ 0.52
SKP2-201ENST00000274254 CREMQ03060 361 aa18.31■□□□□ 0.52
SKP2-201ENST00000274254 PTK2Q05397 1052 aa18.31■□□□□ 0.52
SKP2-201ENST00000274254 BMS1Q14692 1282 aaKnown RBP18.31■□□□□ 0.52
SKP2-201ENST00000274254 PDE12Q6L8Q7 609 aaKnown RBP18.31■□□□□ 0.52
Retrieved 100 of 20,778 RNA–protein pairs in 48.5 ms