RNA–Protein interactions for RNA: ENST00000274071.6

PDGFC-201, Transcript of platelet derived growth factor C, humanhuman

TSL 1 (best)

Gene PDGFC, Length 2,987 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDGFC-201ENST00000274071 TRIP10Q15642 601 aa9.67□□□□□ -0.86
PDGFC-201ENST00000274071 C10orf76Q5T2E6 689 aa9.67□□□□□ -0.86
PDGFC-201ENST00000274071 TTC27Q6P3X3 843 aa9.67□□□□□ -0.86
PDGFC-201ENST00000274071 KIF6Q6ZMV9 814 aa9.67□□□□□ -0.86
PDGFC-201ENST00000274071 MMAAQ8IVH4 418 aaKnown RBP9.67□□□□□ -0.86
PDGFC-201ENST00000274071 GSTCDQ8NEC7 633 aa9.67□□□□□ -0.86
PDGFC-201ENST00000274071 GABPB2Q8TAK5 448 aaPredicted RBP9.67□□□□□ -0.86
PDGFC-201ENST00000274071 SHKBP1Q8TBC3 707 aa9.67□□□□□ -0.86
PDGFC-201ENST00000274071 ZNF75CPQ92670 426 aaPredicted RBP9.67□□□□□ -0.86
PDGFC-201ENST00000274071 ISCA1Q9BUE6 129 aa9.67□□□□□ -0.86
PDGFC-201ENST00000274071 KLC2Q9H0B6 622 aa9.67□□□□□ -0.86
PDGFC-201ENST00000274071 OLFML3Q9NRN5 406 aa9.67□□□□□ -0.86
PDGFC-201ENST00000274071 KBTBD4Q9NVX7 518 aa9.67□□□□□ -0.86
PDGFC-201ENST00000274071 FKBP14Q9NWM8 211 aa9.67□□□□□ -0.86
PDGFC-201ENST00000274071 ARMCX1Q9P291 453 aa9.67□□□□□ -0.86
PDGFC-201ENST00000274071 ANKFY1Q9P2R3 1169 aa9.67□□□□□ -0.86
PDGFC-201ENST00000274071 NAGPAQ9UK23 515 aa9.67□□□□□ -0.86
PDGFC-201ENST00000274071 AMFRQ9UKV5 643 aa9.67□□□□□ -0.86
PDGFC-201ENST00000274071 WDR91A4D1P6 747 aa9.67□□□□□ -0.86
PDGFC-201ENST00000274071 KRBA1A5PL33 1030 aa9.67□□□□□ -0.86
PDGFC-201ENST00000274071 ARHGAP33O14559 1287 aa9.67□□□□□ -0.86
PDGFC-201ENST00000274071 GNPATO15228 680 aa9.67□□□□□ -0.86
PDGFC-201ENST00000274071 TP73O15350 636 aa9.67□□□□□ -0.86
PDGFC-201ENST00000274071 DDX3YO15523 660 aaKnown RBP9.67□□□□□ -0.86
PDGFC-201ENST00000274071 TMCC2O75069 709 aa9.67□□□□□ -0.86
PDGFC-201ENST00000274071 CSF1RP07333 972 aa9.67□□□□□ -0.86
PDGFC-201ENST00000274071 ABCB1P08183 1280 aaPredicted RBP9.67□□□□□ -0.86
PDGFC-201ENST00000274071 CIITAP33076 1130 aa9.67□□□□□ -0.86
PDGFC-201ENST00000274071 LONP1P36776 959 aaKnown RBP9.67□□□□□ -0.86
PDGFC-201ENST00000274071 SCNN1DP51172 638 aa9.67□□□□□ -0.86
PDGFC-201ENST00000274071 ZBTB16Q05516 673 aa9.67□□□□□ -0.86
PDGFC-201ENST00000274071 LRRC63Q05C16 580 aa9.67□□□□□ -0.86
PDGFC-201ENST00000274071 RTN1Q16799 776 aa9.67□□□□□ -0.86
PDGFC-201ENST00000274071 EDRF1Q3B7T1 1238 aa9.67□□□□□ -0.86
PDGFC-201ENST00000274071 ZNF571Q7Z3V5 609 aaPredicted RBP9.67□□□□□ -0.86
PDGFC-201ENST00000274071 AMIGO2Q86SJ2 522 aa9.67□□□□□ -0.86
PDGFC-201ENST00000274071 SYCE1Q8N0S2 351 aa9.67□□□□□ -0.86
PDGFC-201ENST00000274071 SRBD1Q8N5C6 995 aaKnown RBP9.67□□□□□ -0.86
PDGFC-201ENST00000274071 CALML6Q8TD86 181 aa9.67□□□□□ -0.86
PDGFC-201ENST00000274071 HCAR2Q8TDS4 363 aa9.67□□□□□ -0.86
PDGFC-201ENST00000274071 GIMAP1Q8WWP7 306 aa9.67□□□□□ -0.86
PDGFC-201ENST00000274071 HPS1Q92902 700 aa9.67□□□□□ -0.86
PDGFC-201ENST00000274071 RBM15Q96T37 977 aaKnown RBP eCLIP9.67□□□□□ -0.86
PDGFC-201ENST00000274071 PHF20Q9BVI0 1012 aa9.67□□□□□ -0.86
PDGFC-201ENST00000274071 RPAP3Q9H6T3 665 aaPredicted RBP9.67□□□□□ -0.86
PDGFC-201ENST00000274071 LRRC4BQ9NT99 713 aa9.67□□□□□ -0.86
PDGFC-201ENST00000274071 IGSF9Q9P2J2 1179 aa9.67□□□□□ -0.86
PDGFC-201ENST00000274071 GPSM3Q9Y4H4 160 aa9.67□□□□□ -0.86
PDGFC-201ENST00000274071 ARIH1Q9Y4X5 557 aaPredicted RBP9.67□□□□□ -0.86
PDGFC-201ENST00000274071 SLC30A1Q9Y6M5 507 aa9.67□□□□□ -0.86
PDGFC-201ENST00000274071 COL16A1Q07092 1604 aaPredicted RBP9.67□□□□□ -0.86
PDGFC-201ENST00000274071 COL22A1Q8NFW1 1626 aaPredicted RBP9.67□□□□□ -0.86
PDGFC-201ENST00000274071 IDH1O75874 414 aaKnown RBP9.66□□□□□ -0.86
PDGFC-201ENST00000274071 CAMTA2O94983 1202 aa9.66□□□□□ -0.86
PDGFC-201ENST00000274071 GLULP15104 373 aa9.66□□□□□ -0.86
PDGFC-201ENST00000274071 PDE6AP16499 860 aa9.66□□□□□ -0.86
PDGFC-201ENST00000274071 ADSLP30566 484 aaPredicted RBP9.66□□□□□ -0.86
PDGFC-201ENST00000274071 MCM7P33993 719 aa9.66□□□□□ -0.86
PDGFC-201ENST00000274071 RPA3P35244 121 aaPredicted RBP9.66□□□□□ -0.86
PDGFC-201ENST00000274071 ADAM17P78536 824 aa9.66□□□□□ -0.86
PDGFC-201ENST00000274071 IFITM2Q01629 132 aa9.66□□□□□ -0.86
PDGFC-201ENST00000274071 FKBP4Q02790 459 aaKnown RBP eCLIP9.66□□□□□ -0.86
PDGFC-201ENST00000274071 SLC1A5Q15758 541 aa9.66□□□□□ -0.86
PDGFC-201ENST00000274071 CENPPQ6IPU0 288 aa9.66□□□□□ -0.86
PDGFC-201ENST00000274071 RWDD4Q6NW29 188 aaKnown RBP9.66□□□□□ -0.86
PDGFC-201ENST00000274071 ALKBH5Q6P6C2 394 aaKnown RBP9.66□□□□□ -0.86
PDGFC-201ENST00000274071 ATG9AQ7Z3C6 839 aa9.66□□□□□ -0.86
PDGFC-201ENST00000274071 PRUNE1Q86TP1 453 aa9.66□□□□□ -0.86
PDGFC-201ENST00000274071 ELMOD1Q8N336 334 aa9.66□□□□□ -0.86
PDGFC-201ENST00000274071 NATD1Q8N6N6 113 aa9.66□□□□□ -0.86
PDGFC-201ENST00000274071 DDX51Q8N8A6 666 aaKnown RBP eCLIP9.66□□□□□ -0.86
PDGFC-201ENST00000274071 PRELID2Q8N945 189 aa9.66□□□□□ -0.86
PDGFC-201ENST00000274071 C12orf50Q8NA57 414 aaPredicted RBP9.66□□□□□ -0.86
PDGFC-201ENST00000274071 RAB3IL1Q8TBN0 382 aa9.66□□□□□ -0.86
PDGFC-201ENST00000274071 SCFD1Q8WVM8 642 aa9.66□□□□□ -0.86
PDGFC-201ENST00000274071 MAML1Q92585 1016 aa9.66□□□□□ -0.86
PDGFC-201ENST00000274071 FBXL18Q96ME1 805 aa9.66□□□□□ -0.86
PDGFC-201ENST00000274071 SLC4A9Q96Q91 983 aa9.66□□□□□ -0.86
PDGFC-201ENST00000274071 CSRNP1Q96S65 589 aa9.66□□□□□ -0.86
PDGFC-201ENST00000274071 CDH19Q9H159 772 aa9.66□□□□□ -0.86
PDGFC-201ENST00000274071 RNF41Q9H4P4 317 aaPredicted RBP9.66□□□□□ -0.86
PDGFC-201ENST00000274071 C17orf75Q9HAS0 396 aa9.66□□□□□ -0.86
PDGFC-201ENST00000274071 PCYOX1Q9UHG3 505 aa9.66□□□□□ -0.86
PDGFC-201ENST00000274071 SATB2Q9UPW6 733 aa9.66□□□□□ -0.86
PDGFC-201ENST00000274071 A0A1B0GTW7 788 aa9.66□□□□□ -0.86
PDGFC-201ENST00000274071 GOLGA8CPA6NN73 597 aa9.66□□□□□ -0.86
PDGFC-201ENST00000274071 ALOX15BO15296 676 aa9.66□□□□□ -0.86
PDGFC-201ENST00000274071 SRGAP2CP0DJJ0 459 aa9.66□□□□□ -0.86
PDGFC-201ENST00000274071 SRGAP2BP0DMP2 458 aa9.66□□□□□ -0.86
PDGFC-201ENST00000274071 CHRNB2P17787 502 aa9.66□□□□□ -0.86
PDGFC-201ENST00000274071 LMNB1P20700 586 aa9.66□□□□□ -0.86
PDGFC-201ENST00000274071 CHRNA3P32297 505 aa9.66□□□□□ -0.86
PDGFC-201ENST00000274071 CHKAP35790 457 aa9.66□□□□□ -0.86
PDGFC-201ENST00000274071 PIK3CAP42336 1068 aa9.66□□□□□ -0.86
PDGFC-201ENST00000274071 TRIM71Q2Q1W2 868 aaKnown RBP9.66□□□□□ -0.86
PDGFC-201ENST00000274071 GRAMD1BQ3KR37 738 aa9.66□□□□□ -0.86
PDGFC-201ENST00000274071 HERC4Q5GLZ8 1057 aaPredicted RBP9.66□□□□□ -0.86
PDGFC-201ENST00000274071 AADACL2Q6P093 401 aa9.66□□□□□ -0.86
PDGFC-201ENST00000274071 C4orf22Q6V702 233 aa9.66□□□□□ -0.86
PDGFC-201ENST00000274071 TPTE2Q6XPS3 522 aa9.66□□□□□ -0.86
Retrieved 100 of 20,778 RNA–protein pairs in 16.6 ms